Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO210G1005 Papaver somniferum HOM05D006985 ORTHO05D008749 2.8e-106 388.7 201 100.0
PSO170G0586 Papaver somniferum HOM05D006985 ORTHO05D008749 1.8e-73 279.6 157 92.4
Nn5g28916 Nelumbo nucifera HOM05D006985 ORTHO05D008749 1.5e-51 206.8 201 56.2
MBI02_g45734_MAGBIO Magnolia biondii HOM05D006985 ORTHO05D008749 1.3e-50 203.8 210 54.3
TAR625G1052 Trochodendron aralioides HOM05D006985 ORTHO05D008749 8.3e-50 201.1 202 53.0
MBI02_g20708_MAGBIO Magnolia biondii HOM05D006985 ORTHO05D008749 2.4e-49 199.5 190 55.3
Aqoxy5G01954 Aquilegia oxysepala HOM05D006985 ORTHO05D008749 1.5e-46 190.3 207 51.7
Actinidia28892 Actinidia chinensis HOM05D006985 ORTHO05D008749 1.9e-46 189.9 192 51.6
Eucgr.I00326 Eucalyptus grandis HOM05D006985 ORTHO05D008749 3.3e-46 189.1 188 52.1
HanXRQChr14g0446291 Helianthus annuus HOM05D006985 ORTHO05D008749 7.3e-46 188.0 214 48.6
Oeu028373.1 Olea europaea HOM05D006985 ORTHO05D008749 1.2e-45 187.2 201 50.2
CSS0005033 Camellia sinensis var. sinensis HOM05D006985 ORTHO05D008749 1.6e-45 186.8 201 51.2
Aqoxy7G01607 Aquilegia oxysepala HOM05D006985 ORTHO05D008749 2.8e-45 186.0 205 53.7
CSS0027796 Camellia sinensis var. sinensis HOM05D006985 ORTHO05D008749 2.8e-45 186.0 200 51.0
CiPaw.04G092100 Carya illinoinensis HOM05D006985 ORTHO05D008749 6.2e-45 184.9 204 49.5
Duzib147G0418 Durio zibethinus HOM05D006985 ORTHO05D008749 8.0e-45 184.5 212 50.9
GSVIVG01022222001 Vitis vinifera HOM05D006985 ORTHO05D008749 8.0e-45 184.5 180 52.2
Oeu030683.1 Olea europaea HOM05D006985 ORTHO05D008749 1.1e-44 184.1 204 50.0
Ah.03g141710 Amaranthus hybridus HOM05D006985 ORTHO05D008749 1.8e-44 183.3 198 50.0
Nitab4.5_0000471g0030 Nicotiana tabacum HOM05D006985 ORTHO05D008749 1.8e-44 183.3 205 46.8
Lj2A564T40 Lonicera japonica HOM05D006985 ORTHO05D008749 2.3e-44 183.0 207 46.4
COL.COLO4_11016 Corchorus olitorius HOM05D006985 ORTHO05D008749 5.2e-44 181.8 206 48.5
Rhsim08G0007300 Rhododendron simsii HOM05D006985 ORTHO05D008749 5.2e-44 181.8 203 49.3
Rhsim10G0013600 Rhododendron simsii HOM05D006985 ORTHO05D008749 5.2e-44 181.8 202 49.5
Sc16g0004160 Simmondsia chinensis HOM05D006985 ORTHO05D008749 6.8e-44 181.4 197 50.8
CAN.G276.1 Capsicum annuum HOM05D006985 ORTHO05D008749 8.9e-44 181.0 203 46.8
Manes.12G142400 Manihot esculenta HOM05D006985 ORTHO05D008749 8.9e-44 181.0 212 47.6
Hund03540 Selenicereus undatus HOM05D006985 ORTHO05D008749 8.9e-44 181.0 203 49.3
Thecc.01G112400 Theobroma cacao HOM05D006985 ORTHO05D008749 8.9e-44 181.0 213 48.4
EL10Ac6g14751 Beta vulgaris HOM05D006985 ORTHO05D008749 1.5e-43 180.3 192 49.5
AUR62003309 Chenopodium quinoa HOM05D006985 ORTHO05D008749 2.0e-43 179.9 198 48.0
Sabra05G0069300 Salix brachista HOM05D006985 ORTHO05D008749 2.6e-43 179.5 212 46.2
Haze_25036 Corylus avellana HOM05D006985 ORTHO05D008749 5.8e-43 178.3 212 46.7
Gohir.A02G134801 Gossypium hirsutum HOM05D006985 ORTHO05D008749 5.8e-43 178.3 214 48.6
Rhsim08G0006600 Rhododendron simsii HOM05D006985 ORTHO05D008749 5.8e-43 178.3 202 48.5
CANSAT01G0007 Cannabis sativa HOM05D006985 ORTHO05D008749 7.5e-43 177.9 210 47.6
ECA238G4202 Erigeron canadensis HOM05D006985 ORTHO05D008749 7.5e-43 177.9 213 46.9
VMungo0251G1437 Vigna mungo HOM05D006985 ORTHO05D008749 9.8e-43 177.6 211 46.0
Gohir.D03G045800 Gossypium hirsutum HOM05D006985 ORTHO05D008749 1.3e-42 177.2 211 48.8
Gorai.003G047000 Gossypium raimondii HOM05D006985 ORTHO05D008749 1.3e-42 177.2 211 48.8
Cfa002750 Carpinus fangiana HOM05D006985 ORTHO05D008749 1.7e-42 176.8 212 46.7
Ciclev10026526m.g Citrus clementina HOM05D006985 ORTHO05D008749 1.7e-42 176.8 165 53.3
Peaxi162Scf00323g00052 Petunia axillaris HOM05D006985 ORTHO05D008749 1.7e-42 176.8 205 46.3
TWI53G2009 Tripterygium wilfordii HOM05D006985 ORTHO05D008749 1.7e-42 176.8 213 47.4
Cpa.g.sc196.10 Carica papaya HOM05D006985 ORTHO05D008749 2.9e-42 176.0 166 56.0
Potri.005G084200 Populus trichocarpa HOM05D006985 ORTHO05D008749 2.9e-42 176.0 212 45.8
Lalb_Chr13g0296201 Lupinus albus HOM05D006985 ORTHO05D008749 4.9e-42 175.3 207 44.4
Lsat_1_v5_gn_2_67381 Lactuca sativa HOM05D006985 ORTHO05D008749 6.4e-42 174.9 211 46.9
Os04g0639200 Oryza sativa ssp. japonica HOM05D006985 ORTHO05D008749 8.3e-42 174.5 198 47.0
AUR62016276 Chenopodium quinoa HOM05D006985 ORTHO05D008749 1.1e-41 174.1 198 47.5
Duzib187G0142 Durio zibethinus HOM05D006985 ORTHO05D008749 1.4e-41 173.7 212 45.8
THA.LOC104804144 Tarenaya hassleriana HOM05D006985 ORTHO05D008749 1.9e-41 173.3 185 49.2
Solyc04g053130.4 Solanum lycopersicum HOM05D006985 ORTHO05D008749 2.4e-41 172.9 198 45.5
PGR004G1495 Punica granatum HOM05D006985 ORTHO05D008749 3.2e-41 172.6 220 45.9
Zm00001eb431840 Zea mays HOM05D006985 ORTHO05D008749 3.2e-41 172.6 196 48.5
DCAR_010078 Daucus carota HOM05D006985 ORTHO05D008749 5.4e-41 171.8 195 48.7
Atru.chr4.358 Acer truncatum HOM05D006985 ORTHO05D008749 7.0e-41 171.4 172 50.6
Sopen04g023520 Solanum pennellii HOM05D006985 ORTHO05D008749 7.0e-41 171.4 198 45.5
Glyma.08G141300 Glycine max HOM05D006985 ORTHO05D008749 9.2e-41 171.0 205 43.9
Hma1.2p1_0375F.1_g138690 Hydrangea macrophylla HOM05D006985 ORTHO05D008749 9.2e-41 171.0 192 45.8
PGSC0003DMG400016590 Solanum tuberosum HOM05D006985 ORTHO05D008749 9.2e-41 171.0 200 45.5
arahy.Tifrunner.gnm1.ann1.MHK3H7 Arachis hypogaea HOM05D006985 ORTHO05D008749 1.2e-40 170.6 186 47.3
QL06p032211 Quercus lobata HOM05D006985 ORTHO05D008749 1.2e-40 170.6 213 46.5
arahy.Tifrunner.gnm1.ann1.7DG6XK Arachis hypogaea HOM05D006985 ORTHO05D008749 2.1e-40 169.9 186 47.3
Cc07_g16120 Coffea canephora HOM05D006985 ORTHO05D008749 2.1e-40 169.9 219 43.8
MSTRG.23313 Avicennia marina HOM05D006985 ORTHO05D008749 2.7e-40 169.5 197 45.2
ClCG01G016160 Citrullus lanatus HOM05D006985 ORTHO05D008749 3.5e-40 169.1 186 48.4
Phvul.002G264600 Phaseolus vulgaris HOM05D006985 ORTHO05D008749 3.5e-40 169.1 207 44.0
Dinv42695 Davidia involucrata HOM05D006985 ORTHO05D008749 6.0e-40 168.3 190 48.4
SalBow6G7167 Salvia bowleyana HOM05D006985 ORTHO05D008749 6.0e-40 168.3 197 47.2
Glyma.05G183500 Glycine max HOM05D006985 ORTHO05D008749 1.0e-39 167.5 203 43.8
Aa31LG7G14690 Aethionema arabicum HOM05D006985 ORTHO05D008749 3.0e-39 166.0 202 44.1
SGA_v2.0_scaffold51G18747 Striga asiatica HOM05D006985 ORTHO05D008749 5.1e-39 165.2 193 45.1
MELO3C007486.2 Cucumis melo HOM05D006985 ORTHO05D008749 6.6e-39 164.9 181 47.5
Lj4g0016816 Lotus japonicus HOM05D006985 ORTHO05D008749 6.6e-39 164.9 186 47.3
Sed0020932 Sechium edule HOM05D006985 ORTHO05D008749 1.1e-38 164.1 186 46.2
Prupe.6G173300 Prunus persica HOM05D006985 ORTHO05D008749 3.3e-38 162.5 167 50.9
Thhalv10000325m.g Eutrema salsugineum HOM05D006985 ORTHO05D008749 4.3e-38 162.2 180 46.1
CsaV3_6G042430 Cucumis sativus L. HOM05D006985 ORTHO05D008749 7.3e-38 161.4 183 45.4
Sp4g01050 Schrenkiella parvula HOM05D006985 ORTHO05D008749 9.5e-38 161.0 180 47.8
Psat7g051440 Pisum sativum HOM05D006985 ORTHO05D008749 2.8e-37 159.5 199 46.2
RcHm_v2.0_Chr2g0116361 Rosa chinensis HOM05D006985 ORTHO05D008749 3.6e-37 159.1 188 45.2
FAN23G1894 Fragaria x ananassa HOM05D006985 ORTHO05D008749 4.7e-37 158.7 188 45.2
BcaB08g35014 Brassica carinata HOM05D006985 ORTHO05D008749 8.1e-37 157.9 171 48.0
Migut.H02428 Erythranthe guttata HOM05D006985 ORTHO05D008749 8.1e-37 157.9 197 44.2
vmacro18630 Vaccinium macrocarpon HOM05D006985 ORTHO05D008749 1.1e-36 157.5 223 42.6
FvH4_1g22220 Fragaria vesca HOM05D006985 ORTHO05D008749 1.4e-36 157.1 188 44.7
AL4G11290 Arabidopsis lyrata HOM05D006985 ORTHO05D008749 2.3e-36 156.4 167 48.5
AT2G21970 Arabidopsis thaliana HOM05D006985 ORTHO05D008749 4.0e-36 155.6 181 45.3
BcaC07g41109 Brassica carinata HOM05D006985 ORTHO05D008749 4.0e-36 155.6 180 45.6
A09p57880 Brassica napus HOM05D006985 ORTHO05D008749 4.0e-36 155.6 180 45.0
C08p41110 Brassica napus HOM05D006985 ORTHO05D008749 4.0e-36 155.6 180 45.0
BolC8t51677H Brassica oleracea HOM05D006985 ORTHO05D008749 4.0e-36 155.6 180 45.0
BraA09t41180Z Brassica rapa HOM05D006985 ORTHO05D008749 4.0e-36 155.6 180 45.0
Ca_17697_v3 Cicer arietinum L. HOM05D006985 ORTHO05D008749 6.8e-36 154.8 178 47.8
Carub.0004s0111 Capsella rubella HOM05D006985 ORTHO05D008749 8.9e-36 154.5 183 44.8
MD15G1333400 Malus domestica HOM05D006985 ORTHO05D008749 5.8e-35 151.8 199 42.7
Dinv19490 Davidia involucrata HOM05D006985 ORTHO05D008749 1.3e-34 150.6 185 46.5
CDE02G4368 Ceratophyllum demersum HOM05D006985 ORTHO05D008749 2.4e-33 146.4 191 42.4
MSTRG.3810 Avicennia marina HOM05D006985 ORTHO05D008749 4.1e-33 145.6 160 45.0
HPP92_013077 Vanilla planifolia HOM05D006985 ORTHO05D008749 1.2e-32 144.1 165 43.0
ATR0564G194 Amborella trichopoda HOM05D006985 ORTHO05D008749 3.5e-32 142.5 163 47.2
SEGI_00004 Sequoiadendron giganteum HOM05D006985 ORTHO05D008749 2.1e-29 133.3 167 40.7
Hund19658 Selenicereus undatus HOM05D006985 ORTHO05D008749 2.1e-21 106.7 229 31.4
CARHR113060 Cardamine hirsuta HOM05D006985 ORTHO05D008749 7.6e-19 98.2 92 48.9
AagrBONN_evm.TU.Sc2ySwM_362.2621 Anthoceros agrestis HOM05D006985 ORTHO05D008749 4.3e-14 82.4 168 28.0
Mapoly0007s0046 Marchantia polymorpha HOM05D006985 ORTHO05D008749 8.1e-13 78.2 182 30.2
SMO174G0105 Selaginella moellendorffii HOM05D006985 ORTHO05D008749 2.0e-11 73.6 152 26.3
CARHR113050 Cardamine hirsuta HOM05D006985 ORTHO05D008749 4.5e-11 72.4 103 41.7
SMO356G0636 Selaginella moellendorffii HOM05D006985 ORTHO05D008749 1.3e-10 70.9 189 24.9
Pp3c16_13700 Physcomitrium patens HOM05D006985 ORTHO05D008749 5.4e-09 65.5 104 30.8
Pp3c27_3810 Physcomitrium patens HOM05D006985 ORTHO05D008749 3.5e-08 62.8 152 27.6
FAN26G1540 Fragaria x ananassa HOM05D000436 ORTHO05D000678 4.6e-08 62.4 98 37.8
unitig_88.g27736 Utricularia gibba HOM05D006985 ORTHO05D008749 4.6e-08 62.4 109 34.9
CDE08G1171 Ceratophyllum demersum HOM05D000290 ORTHO05D009072 4.3e-06 55.8 109 33.9


User provided reference genes

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