Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO210G0967 Papaver somniferum HOM05D006115 ORTHO05D007528 6.1e-89 330.9 177 100.0
PSO832G3416 Papaver somniferum HOM05D006115 ORTHO05D007528 5.2e-88 327.8 177 98.9
Haze_13113 Corylus avellana HOM05D006115 ORTHO05D007528 8.6e-59 230.7 181 70.2
Cfa014568 Carpinus fangiana HOM05D006115 ORTHO05D007528 1.1e-58 230.3 182 69.8
Nn1g03988 Nelumbo nucifera HOM05D006115 ORTHO05D007528 7.3e-58 227.6 181 67.4
CANSAT64G2665 Cannabis sativa HOM05D006115 ORTHO05D007528 2.8e-57 225.7 178 69.1
Aqoxy4G01223 Aquilegia oxysepala HOM05D006115 ORTHO05D007528 1.1e-56 223.8 177 66.7
RcHm_v2.0_Chr2g0162381 Rosa chinensis HOM05D006115 ORTHO05D007528 2.3e-56 222.6 179 68.2
FvH4_6g45050 Fragaria vesca HOM05D006115 ORTHO05D007528 8.9e-56 220.7 179 68.2
FAN14G2522 Fragaria x ananassa HOM05D006115 ORTHO05D007528 8.9e-56 220.7 179 68.2
Manes.08G098700 Manihot esculenta HOM05D006115 ORTHO05D007528 5.8e-55 218.0 177 68.4
CiPaw.04G123900 Carya illinoinensis HOM05D006115 ORTHO05D007528 7.6e-55 217.6 182 70.9
MD17G1079700 Malus domestica HOM05D006115 ORTHO05D007528 9.9e-55 217.2 183 66.7
Phvul.005G105900 Phaseolus vulgaris HOM05D006115 ORTHO05D007528 1.3e-54 216.9 177 64.4
MD09G1090500 Malus domestica HOM05D006115 ORTHO05D007528 2.2e-54 216.1 184 69.0
FAN09G2594 Fragaria x ananassa HOM05D006115 ORTHO05D007528 2.9e-54 215.7 179 65.9
Nitab4.5_0005380g0050 Nicotiana tabacum HOM05D006115 ORTHO05D007528 3.7e-54 215.3 180 64.4
FAN02G4183 Fragaria x ananassa HOM05D006115 ORTHO05D007528 4.9e-54 214.9 179 65.9
Lj3g0001000 Lotus japonicus HOM05D006115 ORTHO05D007528 4.9e-54 214.9 177 65.0
MBI02_g19258_MAGBIO Magnolia biondii HOM05D006115 ORTHO05D007528 4.9e-54 214.9 180 67.8
TWI75G0783 Tripterygium wilfordii HOM05D006115 ORTHO05D007528 4.9e-54 214.9 179 65.9
Nitab4.5_0001090g0130 Nicotiana tabacum HOM05D006115 ORTHO05D007528 8.3e-54 214.2 180 63.9
MELO3C018748.2 Cucumis melo HOM05D006115 ORTHO05D007528 1.9e-53 213.0 179 65.9
Oeu029929.1 Olea europaea HOM05D006115 ORTHO05D007528 1.9e-53 213.0 180 64.4
ClCG02G001140 Citrullus lanatus HOM05D006115 ORTHO05D007528 2.4e-53 212.6 179 67.6
CsaV3_7G004300 Cucumis sativus L. HOM05D006115 ORTHO05D007528 3.2e-53 212.2 179 65.9
Medtr2g090200 Medicago truncatula HOM05D006115 ORTHO05D007528 3.2e-53 212.2 177 65.0
PGSC0003DMG400018360 Solanum tuberosum HOM05D006115 ORTHO05D007528 3.2e-53 212.2 178 64.6
Duzib132G1267 Durio zibethinus HOM05D006115 ORTHO05D007528 4.1e-53 211.8 181 67.4
QL08p037826 Quercus lobata HOM05D006115 ORTHO05D007528 4.1e-53 211.8 179 64.8
Lalb_Chr14g0366761 Lupinus albus HOM05D006115 ORTHO05D007528 5.4e-53 211.5 177 63.8
Solyc07g054290.1 Solanum lycopersicum HOM05D006115 ORTHO05D007528 5.4e-53 211.5 178 64.6
GSVIVG01030552001 Vitis vinifera HOM05D006115 ORTHO05D007528 5.4e-53 211.5 178 65.7
Psat7g036720 Pisum sativum HOM05D006115 ORTHO05D007528 7.1e-53 211.1 177 65.0
Sabra05G0156800 Salix brachista HOM05D006115 ORTHO05D007528 7.1e-53 211.1 177 66.1
CDE05G3372 Ceratophyllum demersum HOM05D006115 ORTHO05D007528 1.2e-52 210.3 183 65.0
Hma1.2p1_0875F.1_g231400 Hydrangea macrophylla HOM05D006115 ORTHO05D007528 1.2e-52 210.3 180 66.1
PGR142G3842 Punica granatum HOM05D006115 ORTHO05D007528 2.7e-52 209.1 188 64.4
Sopen07g028230 Solanum pennellii HOM05D006115 ORTHO05D007528 4.6e-52 208.4 178 64.0
Oeu040003.1 Olea europaea HOM05D006115 ORTHO05D007528 7.8e-52 207.6 179 62.6
Potri.002G056300 Populus trichocarpa HOM05D006115 ORTHO05D007528 7.8e-52 207.6 179 62.6
Potri.005G206200 Populus trichocarpa HOM05D006115 ORTHO05D007528 7.8e-52 207.6 179 64.2
FAN05G1351 Fragaria x ananassa HOM05D006115 ORTHO05D007528 1.0e-51 207.2 176 64.8
Lalb_Chr24g0399841 Lupinus albus HOM05D006115 ORTHO05D007528 1.0e-51 207.2 181 63.5
Peaxi162Scf00610g00313 Petunia axillaris HOM05D006115 ORTHO05D007528 1.3e-51 206.8 180 62.8
Sabra02G0045600 Salix brachista HOM05D006115 ORTHO05D007528 1.7e-51 206.5 177 62.7
unitig_749.g13954 Utricularia gibba HOM05D006115 ORTHO05D007528 1.7e-51 206.5 181 61.9
Cc05_g06750 Coffea canephora HOM05D006115 ORTHO05D007528 2.3e-51 206.1 185 64.3
Prupe.3G235100 Prunus persica HOM05D006115 ORTHO05D007528 2.3e-51 206.1 182 67.0
Sed0009578 Sechium edule HOM05D006115 ORTHO05D007528 8.6e-51 204.1 178 64.0
Peaxi162Scf00132g00062 Petunia axillaris HOM05D006115 ORTHO05D007528 1.1e-50 203.8 180 60.6
VMungo1080G1219 Vigna mungo HOM05D006115 ORTHO05D007528 1.1e-50 203.8 177 62.7
Ciclev10016927m.g Citrus clementina HOM05D006115 ORTHO05D007528 1.9e-50 203.0 180 62.2
Eucgr.K00947 Eucalyptus grandis HOM05D006115 ORTHO05D007528 2.5e-50 202.6 185 63.2
COL.COLO4_35403 Corchorus olitorius HOM05D006115 ORTHO05D007528 3.3e-50 202.2 180 65.0
DCAR_019192 Daucus carota HOM05D006115 ORTHO05D007528 5.6e-50 201.4 178 64.6
CSS0015532 Camellia sinensis var. sinensis HOM05D006115 ORTHO05D007528 1.2e-49 200.3 184 63.6
CSS0031699 Camellia sinensis var. sinensis HOM05D006115 ORTHO05D007528 1.2e-49 200.3 184 63.6
Atru.chr6.3034 Acer truncatum HOM05D006115 ORTHO05D007528 1.6e-49 199.9 181 62.4
Sed0024793 Sechium edule HOM05D006115 ORTHO05D007528 1.6e-49 199.9 179 62.6
unitig_26.g9943 Utricularia gibba HOM05D006115 ORTHO05D007528 1.6e-49 199.9 184 59.8
Duzib248G0317 Durio zibethinus HOM05D006115 ORTHO05D007528 2.1e-49 199.5 177 63.8
TWI18G1016 Tripterygium wilfordii HOM05D006115 ORTHO05D007528 2.8e-49 199.1 178 62.4
Ah.08g220260 Amaranthus hybridus HOM05D006115 ORTHO05D007528 4.7e-49 198.4 180 62.8
TPR.G35547 Trifolium pratense HOM05D006115 ORTHO05D007528 4.7e-49 198.4 177 62.1
Glyma.12G202500 Glycine max HOM05D006115 ORTHO05D007528 1.1e-48 197.2 178 63.5
Thecc.02G175700 Theobroma cacao HOM05D006115 ORTHO05D007528 1.4e-48 196.8 177 62.7
Rhsim06G0148500 Rhododendron simsii HOM05D006115 ORTHO05D007528 3.1e-48 195.7 173 61.3
Gohir.A12G137300 Gossypium hirsutum HOM05D006115 ORTHO05D007528 8.9e-48 194.1 182 62.1
HanXRQChr17g0542591 Helianthus annuus HOM05D006115 ORTHO05D007528 1.2e-47 193.7 179 62.0
Dinv03833 Davidia involucrata HOM05D006115 ORTHO05D007528 2.6e-47 192.6 175 63.4
MSTRG.12305 Avicennia marina HOM05D006115 ORTHO05D007528 9.9e-47 190.7 183 61.2
Glyma.13G299200 Glycine max HOM05D006115 ORTHO05D007528 9.9e-47 190.7 116 80.2
Gohir.D01G015900 Gossypium hirsutum HOM05D006115 ORTHO05D007528 9.9e-47 190.7 182 59.9
Gohir.A01G015900 Gossypium hirsutum HOM05D006115 ORTHO05D007528 1.3e-46 190.3 180 60.0
Gohir.D12G141300 Gossypium hirsutum HOM05D006115 ORTHO05D007528 1.3e-46 190.3 179 60.9
Gorai.008G152600 Gossypium raimondii HOM05D006115 ORTHO05D007528 2.9e-46 189.1 177 59.9
Gorai.002G017600 Gossypium raimondii HOM05D006115 ORTHO05D007528 4.9e-46 188.3 182 59.3
AUR62041946 Chenopodium quinoa HOM05D006115 ORTHO05D007528 6.4e-46 188.0 183 59.6
BraA08t35627Z Brassica rapa HOM05D006115 ORTHO05D007528 5.4e-45 184.9 155 63.2
AUR62028441 Chenopodium quinoa HOM05D006115 ORTHO05D007528 5.4e-45 184.9 182 59.9
Migut.H01055 Erythranthe guttata HOM05D006115 ORTHO05D007528 1.6e-44 183.3 184 58.2
Aa31LG1G20930 Aethionema arabicum HOM05D006115 ORTHO05D007528 2.7e-44 182.6 182 58.8
SGA_v2.0_scaffold356G49787 Striga asiatica HOM05D006115 ORTHO05D007528 3.5e-44 182.2 173 60.1
THA.LOC104827374 Tarenaya hassleriana HOM05D006115 ORTHO05D007528 3.5e-44 182.2 136 66.2
BolC8t46868H Brassica oleracea HOM05D006115 ORTHO05D007528 4.6e-44 181.8 157 63.1
Lsat_1_v5_gn_3_39480 Lactuca sativa HOM05D006115 ORTHO05D007528 7.8e-44 181.0 180 60.0
Sp1g02510 Schrenkiella parvula HOM05D006115 ORTHO05D007528 7.8e-44 181.0 136 67.6
MSTRG.14200 Avicennia marina HOM05D006115 ORTHO05D007528 1.0e-43 180.6 183 59.0
BcaB02g06915 Brassica carinata HOM05D006115 ORTHO05D007528 1.0e-43 180.6 174 58.6
Zm00001eb395230 Zea mays HOM05D006115 ORTHO05D007528 1.0e-43 180.6 167 60.5
A10p02120 Brassica napus HOM05D006115 ORTHO05D007528 2.3e-43 179.5 180 57.8
Thhalv10008901m.g Eutrema salsugineum HOM05D006115 ORTHO05D007528 2.3e-43 179.5 181 57.5
Lj1P733T48 Lonicera japonica HOM05D006115 ORTHO05D007528 3.0e-43 179.1 126 69.0
Zm00001eb015950 Zea mays HOM05D006115 ORTHO05D007528 3.9e-43 178.7 168 60.1
Lj8P115T48 Lonicera japonica HOM05D006115 ORTHO05D007528 5.1e-43 178.3 114 77.2
Actinidia09875 Actinidia chinensis HOM05D006115 ORTHO05D007528 8.7e-43 177.6 122 73.0
BolC5t28981H Brassica oleracea HOM05D006115 ORTHO05D007528 1.9e-42 176.4 180 57.2
A08p37300 Brassica napus HOM05D006115 ORTHO05D007528 3.3e-42 175.6 183 57.4
THA.LOC104801178 Tarenaya hassleriana HOM05D006115 ORTHO05D007528 4.3e-42 175.3 118 73.7
BcaC05g24519 Brassica carinata HOM05D006115 ORTHO05D007528 5.6e-42 174.9 180 57.8
C05p02030 Brassica napus HOM05D006115 ORTHO05D007528 5.6e-42 174.9 180 57.8
AL1G13100 Arabidopsis lyrata HOM05D006115 ORTHO05D007528 7.3e-42 174.5 179 55.9
Carub.0001s0272 Capsella rubella HOM05D006115 ORTHO05D007528 7.3e-42 174.5 179 55.9
BcaC07g36953 Brassica carinata HOM05D006115 ORTHO05D007528 9.6e-42 174.1 183 56.8
C08p00700 Brassica napus HOM05D006115 ORTHO05D007528 9.6e-42 174.1 183 56.8
HPP92_017628 Vanilla planifolia HOM05D006115 ORTHO05D007528 1.3e-41 173.7 156 59.0
ECA246G1074 Erigeron canadensis HOM05D006115 ORTHO05D007528 1.6e-41 173.3 178 56.7
AT1G03600 Arabidopsis thaliana HOM05D006115 ORTHO05D007528 2.8e-41 172.6 179 55.3
Duzib052G1052 Durio zibethinus HOM05D006115 ORTHO05D007528 2.8e-41 172.6 169 59.2
BraA10t42481Z Brassica rapa HOM05D006115 ORTHO05D007528 3.6e-41 172.2 105 78.1
Os03g0333400 Oryza sativa ssp. japonica HOM05D006115 ORTHO05D007528 3.6e-41 172.2 172 58.1
Sc12g0002830 Simmondsia chinensis HOM05D006115 ORTHO05D007528 3.6e-41 172.2 103 81.6
CARHR002940 Cardamine hirsuta HOM05D006115 ORTHO05D007528 1.4e-40 170.2 179 54.7
CDE05G0569 Ceratophyllum demersum HOM05D006115 ORTHO05D007528 7.1e-37 157.9 145 60.7
TAR627G0228 Trochodendron aralioides HOM05D006115 ORTHO05D007528 6.6e-35 151.4 126 64.3
SEGI_04908 Sequoiadendron giganteum HOM05D006115 ORTHO05D007528 9.6e-34 147.5 110 64.5
Ca_01513_v3 Cicer arietinum L. HOM05D006115 ORTHO05D007528 1.8e-32 143.3 85 80.0
Actinidia11067 Actinidia chinensis HOM05D006115 ORTHO05D007528 3.8e-30 135.6 147 57.8
Pp3c9_26020 Physcomitrium patens HOM05D006115 ORTHO05D007528 1.9e-29 133.3 178 44.4
SMO364G0930 Selaginella moellendorffii HOM05D006115 ORTHO05D007528 1.9e-29 133.3 134 51.5
AagrBONN_evm.TU.Sc2ySwM_228.954 Anthoceros agrestis HOM05D006115 ORTHO05D007528 3.5e-28 129.0 126 52.4
Mapoly0049s0056 Marchantia polymorpha HOM05D006115 ORTHO05D007528 6.0e-28 128.3 138 50.0
CBR_g50764 Chara braunii HOM05D006115 ORTHO05D007528 1.1e-26 124.0 115 54.8
Cre05.g243800 Chlamydomonas reinhardtii HOM05D006115 ORTHO05D007528 7.1e-21 104.8 143 41.3
MCO14G469 Micromonas commoda HOM05D006115 ORTHO05D007528 9.3e-21 104.4 158 38.0
ATR0693G305 Amborella trichopoda HOM05D006115 ORTHO05D007528 3.7e-17 92.4 131 48.1
Dinv23684 Davidia involucrata HOM05D006115 ORTHO05D007528 1.7e-14 83.6 170 39.4
Ciclev10005922m.g Citrus clementina HOM05D007072 ORTHO05D008841 1.3e-06 57.4 98 27.6
Nitab4.5_0000043g0120 Nicotiana tabacum HOM05D007072 ORTHO05D008841 3.8e-06 55.8 100 27.0
BolC5t29149H Brassica oleracea HOM05D007072 ORTHO05D008841 6.5e-06 55.1 98 26.5
FAN22G0737 Fragaria x ananassa HOM05D007072 ORTHO05D008841 6.5e-06 55.1 100 28.0
A10p04090 Brassica napus HOM05D007072 ORTHO05D008841 8.5e-06 54.7 98 26.5
BraA10t42680Z Brassica rapa HOM05D007072 ORTHO05D008841 8.5e-06 54.7 98 26.5


User provided reference genes

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