Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO210G0904 Papaver somniferum HOM05D006455 ORTHO05D008098 9.1e-271 936.4 508 100.0
PSO210G7796 Papaver somniferum HOM05D006455 ORTHO05D008098 1.1e-252 876.3 510 94.1
TAR362G0985 Trochodendron aralioides HOM05D006455 ORTHO05D008098 1.0e-152 544.3 513 56.7
Aqoxy2G04132 Aquilegia oxysepala HOM05D006455 ORTHO05D008098 5.5e-151 538.5 508 57.5
Haze_08072 Corylus avellana HOM05D006455 ORTHO05D008098 7.8e-145 518.1 514 55.6
Cfa012584 Carpinus fangiana HOM05D006455 ORTHO05D008098 1.9e-143 513.5 514 55.1
Nn1g09557 Nelumbo nucifera HOM05D006455 ORTHO05D008098 4.3e-143 512.3 516 54.7
GSVIVG01001915001 Vitis vinifera HOM05D006455 ORTHO05D008098 3.6e-142 509.2 514 53.7
CiPaw.12G071600 Carya illinoinensis HOM05D006455 ORTHO05D008098 8.3e-139 498.0 512 53.7
Gorai.007G161800 Gossypium raimondii HOM05D006455 ORTHO05D008098 1.9e-138 496.9 510 53.3
TWI75G0274 Tripterygium wilfordii HOM05D006455 ORTHO05D008098 1.9e-138 496.9 512 53.3
Gohir.A11G144500 Gossypium hirsutum HOM05D006455 ORTHO05D008098 5.4e-138 495.4 511 53.0
Manes.12G057502 Manihot esculenta HOM05D006455 ORTHO05D008098 1.5e-135 487.3 514 52.3
Manes.12G057904 Manihot esculenta HOM05D006455 ORTHO05D008098 1.9e-135 486.9 514 52.3
Thecc.01G205700 Theobroma cacao HOM05D006455 ORTHO05D008098 1.9e-135 486.9 509 52.1
Atru.chr6.3495 Acer truncatum HOM05D006455 ORTHO05D008098 5.6e-135 485.3 511 54.4
Migut.D00764 Erythranthe guttata HOM05D006455 ORTHO05D008098 5.6e-135 485.3 513 52.6
Eucgr.K02350 Eucalyptus grandis HOM05D006455 ORTHO05D008098 3.6e-134 482.6 515 52.8
CSS0002127 Camellia sinensis var. sinensis HOM05D006455 ORTHO05D008098 1.4e-133 480.7 423 57.4
AUR62028628 Chenopodium quinoa HOM05D006455 ORTHO05D008098 1.2e-132 477.6 514 50.4
SGA_v2.0_scaffold158G37512 Striga asiatica HOM05D006455 ORTHO05D008098 2.6e-132 476.5 532 47.4
Manes.12G057700 Manihot esculenta HOM05D006455 ORTHO05D008098 4.4e-132 475.7 514 52.1
Manes.12G057901 Manihot esculenta HOM05D006455 ORTHO05D008098 4.4e-132 475.7 514 52.1
Ciclev10014895m.g Citrus clementina HOM05D006455 ORTHO05D008098 5.8e-132 475.3 518 52.7
AUR62008053 Chenopodium quinoa HOM05D006455 ORTHO05D008098 1.3e-131 474.2 506 49.8
CsaV3_3G001300 Cucumis sativus L. HOM05D006455 ORTHO05D008098 4.9e-131 472.2 516 49.0
ATR0743G062 Amborella trichopoda HOM05D006455 ORTHO05D008098 6.4e-131 471.9 513 51.9
Hund02815 Selenicereus undatus HOM05D006455 ORTHO05D008098 2.4e-130 469.9 510 49.0
Rhsim13G0055500 Rhododendron simsii HOM05D006455 ORTHO05D008098 5.4e-130 468.8 518 50.6
Cpa.g.sc8.27 Carica papaya HOM05D006455 ORTHO05D008098 1.2e-129 467.6 497 55.1
Nitab4.5_0006514g0010 Nicotiana tabacum HOM05D006455 ORTHO05D008098 1.6e-129 467.2 512 49.8
MSTRG.18514 Avicennia marina HOM05D006455 ORTHO05D008098 2.1e-129 466.8 511 49.9
COL.COLO4_29922 Corchorus olitorius HOM05D006455 ORTHO05D008098 3.5e-129 466.1 524 53.2
Prupe.2G049600 Prunus persica HOM05D006455 ORTHO05D008098 7.8e-129 464.9 512 50.2
RcHm_v2.0_Chr7g0228451 Rosa chinensis HOM05D006455 ORTHO05D008098 1.7e-128 463.8 508 51.8
Nitab4.5_0000077g0170 Nicotiana tabacum HOM05D006455 ORTHO05D008098 5.1e-128 462.2 513 50.1
FvH4_5g32260 Fragaria vesca HOM05D006455 ORTHO05D008098 8.6e-128 461.5 507 49.7
Cc04_g10320 Coffea canephora HOM05D006455 ORTHO05D008098 3.3e-127 459.5 513 48.1
FAN18G4165 Fragaria x ananassa HOM05D006455 ORTHO05D008098 9.5e-127 458.0 507 49.5
QL12p000818 Quercus lobata HOM05D006455 ORTHO05D008098 6.2e-126 455.3 428 57.0
ECA248G0009 Erigeron canadensis HOM05D006455 ORTHO05D008098 2.0e-124 450.3 517 51.5
MD02G1270700 Malus domestica HOM05D006455 ORTHO05D008098 2.6e-124 449.9 507 48.9
PGR044G2428 Punica granatum HOM05D006455 ORTHO05D008098 2.6e-124 449.9 519 47.2
Sopen09g013040 Solanum pennellii HOM05D006455 ORTHO05D008098 4.4e-124 449.1 512 48.6
Potri.014G174300 Populus trichocarpa HOM05D006455 ORTHO05D008098 1.7e-123 447.2 516 51.2
FAN13G0315 Fragaria x ananassa HOM05D006455 ORTHO05D008098 2.9e-123 446.4 507 48.7
Sc05g0001610 Simmondsia chinensis HOM05D006455 ORTHO05D008098 4.9e-123 445.7 504 49.4
CANSAT21G2240 Cannabis sativa HOM05D006455 ORTHO05D008098 8.3e-123 444.9 512 48.2
AT5G48340 Arabidopsis thaliana HOM05D006455 ORTHO05D008098 2.4e-122 443.4 505 51.5
Lj1A106T21 Lonicera japonica HOM05D006455 ORTHO05D008098 3.2e-122 443.0 497 51.7
ClCG10G001240 Citrullus lanatus HOM05D006455 ORTHO05D008098 1.2e-121 441.0 499 51.5
MELO3C013818.2 Cucumis melo HOM05D006455 ORTHO05D008098 1.2e-121 441.0 418 54.1
AL8G21110 Arabidopsis lyrata HOM05D006455 ORTHO05D008098 6.0e-121 438.7 509 51.7
unitig_0.g222 Utricularia gibba HOM05D006455 ORTHO05D008098 7.8e-121 438.3 513 44.2
Sed0000077 Sechium edule HOM05D006455 ORTHO05D008098 8.6e-120 434.9 416 52.4
Sp2g18700 Schrenkiella parvula HOM05D006455 ORTHO05D008098 1.1e-119 434.5 506 46.4
Aa31LG5G9090 Aethionema arabicum HOM05D006455 ORTHO05D008098 1.9e-119 433.7 503 50.3
CARHR183890 Cardamine hirsuta HOM05D006455 ORTHO05D008098 4.3e-119 432.6 506 51.2
Lsat_1_v5_gn_5_176300 Lactuca sativa HOM05D006455 ORTHO05D008098 5.6e-119 432.2 516 48.1
Carub.0008s0792 Capsella rubella HOM05D006455 ORTHO05D008098 9.6e-119 431.4 512 49.0
FAN08G0013 Fragaria x ananassa HOM05D006455 ORTHO05D004776 1.2e-118 431.0 491 49.7
HanXRQChr01g0014041 Helianthus annuus HOM05D006455 ORTHO05D008098 2.4e-117 426.8 508 47.8
Lalb_Chr16g0391751 Lupinus albus HOM05D006455 ORTHO05D008098 1.2e-116 424.5 513 48.3
BcaC06g30805 Brassica carinata HOM05D006455 ORTHO05D008098 2.0e-116 423.7 511 49.1
HanXRQChr01g0013871 Helianthus annuus HOM05D006455 ORTHO05D008098 2.0e-116 423.7 508 47.4
A06p39230 Brassica napus HOM05D006455 ORTHO05D008098 3.4e-116 422.9 512 49.0
Sabra14G0133600 Salix brachista HOM05D006455 ORTHO05D008098 7.6e-116 421.8 519 48.9
Peaxi162Scf00315g00814 Petunia axillaris HOM05D006455 ORTHO05D008098 1.7e-115 420.6 493 47.9
BraA06t26837Z Brassica rapa HOM05D006455 ORTHO05D008098 2.2e-115 420.2 514 49.4
BcaC06g30808 Brassica carinata HOM05D006455 ORTHO05D008098 3.8e-115 419.5 511 50.1
BolC7t44431H Brassica oleracea HOM05D006455 ORTHO05D008098 4.9e-115 419.1 514 48.8
Os01g0897100 Oryza sativa ssp. japonica HOM05D006455 ORTHO05D008098 4.9e-115 419.1 510 46.5
C07p39110 Brassica napus HOM05D006455 ORTHO05D008098 8.4e-115 418.3 511 49.3
MBI07_g34151_MAGBIO Magnolia biondii HOM05D006455 ORTHO05D008098 1.1e-114 417.9 465 53.8
Lj4g0021895 Lotus japonicus HOM05D006455 ORTHO05D008098 3.2e-114 416.4 515 47.0
VMungo0251G3325 Vigna mungo HOM05D006455 ORTHO05D008098 4.2e-114 416.0 511 50.3
TPR.G31161 Trifolium pratense HOM05D006455 ORTHO05D008098 1.2e-113 414.5 517 46.6
Ca_30349_v3 Cicer arietinum L. HOM05D006455 ORTHO05D008098 6.0e-113 412.1 517 46.0
Solyc09g020150.4 Solanum lycopersicum HOM05D006455 ORTHO05D008098 8.7e-112 408.3 493 46.7
SHI10210 Sapria himalayana HOM05D006455 ORTHO05D008098 1.1e-111 407.9 516 46.9
Glyma.16G105200 Glycine max HOM05D006455 ORTHO05D008098 2.8e-110 403.3 490 45.3
Psat4g108080 Pisum sativum HOM05D006455 ORTHO05D008098 1.4e-109 401.0 513 43.9
Thhalv10003907m.g Eutrema salsugineum HOM05D006455 ORTHO05D008098 2.2e-107 393.7 488 47.5
Manes.12G057900 Manihot esculenta HOM05D006455 ORTHO05D008098 2.9e-107 393.3 489 45.2
SEGI_16096 Sequoiadendron giganteum HOM05D006455 ORTHO05D008098 1.4e-106 391.0 517 45.3
Ca_22482_v3 Cicer arietinum L. HOM05D006455 ORTHO05D008098 3.2e-106 389.8 498 45.8
Zm00001eb144730 Zea mays HOM05D006455 ORTHO05D008098 4.2e-106 389.4 387 50.6
arahy.Tifrunner.gnm1.ann1.E0JCGG Arachis hypogaea HOM05D006455 ORTHO05D008098 2.7e-105 386.7 493 45.2
arahy.Tifrunner.gnm1.ann1.U8H9H1 Arachis hypogaea HOM05D006455 ORTHO05D008098 6.0e-105 385.6 497 45.7
Manes.12G058105 Manihot esculenta HOM05D006455 ORTHO05D008098 7.8e-105 385.2 489 45.2
vmacro02844 Vaccinium macrocarpon HOM05D006455 ORTHO05D008098 3.0e-104 383.3 500 46.0
Phvul.003G279900 Phaseolus vulgaris HOM05D006455 ORTHO05D008098 6.6e-104 382.1 507 47.5
Medtr8g071270 Medicago truncatula HOM05D006455 ORTHO05D008098 2.5e-103 380.2 494 45.3
Gohir.D11G150900 Gossypium hirsutum HOM05D006455 ORTHO05D008098 7.3e-103 378.6 388 53.9
DCAR_000439 Daucus carota HOM05D006455 ORTHO05D008098 2.4e-101 373.6 359 51.5
Ah.11g050710 Amaranthus hybridus HOM05D006455 ORTHO05D008098 3.1e-101 373.2 513 45.2
EL10Ac5g10573 Beta vulgaris HOM05D006455 ORTHO05D008098 2.6e-100 370.2 398 50.0
Actinidia23129 Actinidia chinensis HOM05D006455 ORTHO05D008098 5.8e-100 369.0 506 46.2
HPP92_001271 Vanilla planifolia HOM05D006455 ORTHO05D008098 2.9e-91 340.1 334 50.3
Dinv07639 Davidia involucrata HOM05D006455 ORTHO05D008098 4.3e-79 299.7 386 43.3
Manes.12G058904 Manihot esculenta HOM05D006455 ORTHO05D008098 4.5e-76 289.7 270 53.0
Mapoly0109s0061 Marchantia polymorpha HOM05D006455 ORTHO05D008098 5.9e-68 262.7 515 37.9
HPP92_001254 Vanilla planifolia HOM05D006455 ORTHO05D008098 6.5e-67 259.2 221 57.5
Manes.12G057503 Manihot esculenta HOM05D006455 ORTHO05D008098 1.9e-66 257.7 196 62.2
Manes.12G057505 Manihot esculenta HOM05D006455 ORTHO05D008098 1.9e-66 257.7 196 62.2
PGSC0003DMG402020303 Solanum tuberosum HOM05D006455 ORTHO05D008098 4.7e-65 253.1 342 44.2
SMO200G0077 Selaginella moellendorffii HOM05D006455 ORTHO05D008098 5.7e-63 246.1 498 33.7
Oeu030353.1 Olea europaea HOM05D006455 ORTHO05D008098 9.7e-63 245.4 325 47.1
CDE05G1197 Ceratophyllum demersum HOM05D006455 ORTHO05D008098 8.2e-62 242.3 160 68.1
Pp3c10_13370 Physcomitrium patens HOM05D006455 ORTHO05D008098 8.2e-62 242.3 523 33.7
AagrBONN_evm.TU.Sc2ySwM_228.5553 Anthoceros agrestis HOM05D006455 ORTHO05D008098 7.2e-50 202.6 427 33.5
CBR_g48756 Chara braunii HOM05D006455 ORTHO05D000497 1.0e-40 172.2 279 34.4
Zm00001eb128090 Zea mays HOM05D006455 ORTHO05D008098 4.7e-25 120.2 170 40.0
Zm00001eb128100 Zea mays HOM05D006455 ORTHO05D008098 8.0e-25 119.4 144 44.4
Zm00001eb274660 Zea mays HOM05D006455 ORTHO05D008098 5.2e-24 116.7 145 44.1
Oeu030354.1 Olea europaea HOM05D006455 ORTHO05D008098 1.7e-22 111.7 117 48.7
EL10Ac5g10574 Beta vulgaris HOM05D006455 ORTHO05D008098 8.3e-22 109.4 117 47.9
PGSC0003DMG400020304 Solanum tuberosum HOM05D006455 ORTHO05D008098 9.2e-21 105.9 117 47.9
Manes.12G057504 Manihot esculenta HOM05D006455 ORTHO05D008098 6.6e-19 99.8 193 40.4
Phvul.003G297266 Phaseolus vulgaris HOM05D006455 ORTHO05D008098 6.8e-16 89.7 123 39.0
Oeu003682.1 Olea europaea HOM05D006455 ORTHO05D008098 3.4e-15 87.4 117 41.0
Cre03.g197250 Chlamydomonas reinhardtii HOM05D006455 ORTHO05D008098 7.5e-15 86.3 224 25.9
Actinidia33399 Actinidia chinensis HOM05D006455 ORTHO05D008098 2.0e-07 61.6 37 64.9


User provided reference genes

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