Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO210G0863 Papaver somniferum HOM05D006784 ORTHO05D008508 4.6e-183 644.4 324 100.0
PSO761G0491 Papaver somniferum HOM05D006784 ORTHO05D008508 6.4e-177 624.0 324 95.4
MBI03_g07138_MAGBIO Magnolia biondii HOM05D006784 ORTHO05D008508 4.1e-123 445.3 325 66.5
TAR376G1107 Trochodendron aralioides HOM05D006784 ORTHO05D008508 7.0e-123 444.5 282 73.0
Dinv08766 Davidia involucrata HOM05D006784 ORTHO05D008508 1.3e-121 440.3 324 66.7
GSVIVG01037159001 Vitis vinifera HOM05D006784 ORTHO05D008508 1.1e-120 437.2 304 68.1
Potri.013G095300 Populus trichocarpa HOM05D006784 ORTHO05D008508 1.8e-118 429.9 305 67.2
Manes.02G202800 Manihot esculenta HOM05D006784 ORTHO05D008508 3.0e-118 429.1 301 68.8
Atru.chr13.2579 Acer truncatum HOM05D006784 ORTHO05D008508 6.7e-118 427.9 317 64.7
CSS0003574 Camellia sinensis var. sinensis HOM05D006784 ORTHO05D008508 3.3e-117 425.6 327 64.5
Actinidia01543 Actinidia chinensis HOM05D006784 ORTHO05D008508 7.4e-117 424.5 300 67.0
Nn5g27234 Nelumbo nucifera HOM05D006784 ORTHO05D008508 2.2e-116 422.9 307 66.4
Sabra13G0081300 Salix brachista HOM05D006784 ORTHO05D008508 1.1e-115 420.6 305 65.2
Thecc.08G168600 Theobroma cacao HOM05D006784 ORTHO05D008508 5.3e-115 418.3 294 68.0
CANSAT11G0581 Cannabis sativa HOM05D006784 ORTHO05D008508 7.0e-115 417.9 301 66.4
QL09p001285 Quercus lobata HOM05D006784 ORTHO05D008508 3.5e-114 415.6 324 62.0
Oeu035045.1 Olea europaea HOM05D006784 ORTHO05D008508 4.5e-114 415.2 299 64.2
RcHm_v2.0_Chr6g0249611 Rosa chinensis HOM05D006784 ORTHO05D008508 4.5e-114 415.2 323 62.8
Glyma.04G110300 Glycine max HOM05D006784 ORTHO05D008508 2.9e-113 412.5 304 63.2
Rhsim12G0001900 Rhododendron simsii HOM05D006784 ORTHO05D008508 8.5e-113 411.0 326 61.7
Lalb_Chr15g0080091 Lupinus albus HOM05D006784 ORTHO05D008508 1.9e-112 409.8 301 62.8
DCAR_003507 Daucus carota HOM05D006784 ORTHO05D008508 2.5e-112 409.5 316 60.8
ClCG08G001730 Citrullus lanatus HOM05D006784 ORTHO05D008508 4.2e-112 408.7 305 63.9
Sed0009601 Sechium edule HOM05D006784 ORTHO05D008508 4.2e-112 408.7 324 62.0
Migut.C01398 Erythranthe guttata HOM05D006784 ORTHO05D008508 1.2e-111 407.1 297 64.3
TPR.G25500 Trifolium pratense HOM05D006784 ORTHO05D008508 8.0e-111 404.4 301 60.5
Gorai.009G262200 Gossypium raimondii HOM05D006784 ORTHO05D008508 3.0e-110 402.5 306 66.0
FvH4_2g00320 Fragaria vesca HOM05D006784 ORTHO05D008508 6.8e-110 401.4 316 61.1
Medtr3g006210 Medicago truncatula HOM05D006784 ORTHO05D008508 8.8e-110 401.0 301 60.5
Ciclev10021219m.g Citrus clementina HOM05D006784 ORTHO05D008508 1.5e-109 400.2 318 62.3
EL10Ac1g01284 Beta vulgaris HOM05D006784 ORTHO05D008508 2.6e-109 399.4 292 63.7
Cc10_g16080 Coffea canephora HOM05D006784 ORTHO05D008508 3.1e-107 392.5 310 59.7
Sc23g0000020 Simmondsia chinensis HOM05D006784 ORTHO05D008508 4.1e-107 392.1 287 63.1
Glyma.06G323800 Glycine max HOM05D006784 ORTHO05D008508 5.3e-107 391.7 304 62.2
Sopen11g020490 Solanum pennellii HOM05D006784 ORTHO05D008508 5.3e-107 391.7 300 61.3
arahy.Tifrunner.gnm1.ann1.9TUP5I Arachis hypogaea HOM05D006784 ORTHO05D008508 7.0e-107 391.3 304 61.8
MELO3C022124.2 Cucumis melo HOM05D006784 ORTHO05D008508 7.0e-107 391.3 314 60.5
Eucgr.F02928 Eucalyptus grandis HOM05D006784 ORTHO05D008508 1.2e-106 390.6 322 59.3
Hund26939 Selenicereus undatus HOM05D006784 ORTHO05D008508 1.2e-106 390.6 313 58.1
CARHR064620 Cardamine hirsuta HOM05D006784 ORTHO05D008508 1.3e-105 387.1 298 61.4
ATR1089G080 Amborella trichopoda HOM05D006784 ORTHO05D008508 1.7e-105 386.7 299 60.5
arahy.Tifrunner.gnm1.ann1.VA03RP Arachis hypogaea HOM05D006784 ORTHO05D008508 1.7e-105 386.7 303 60.7
CsaV3_5G039470 Cucumis sativus L. HOM05D006784 ORTHO05D008508 3.8e-105 385.6 308 60.1
Phvul.005G002500 Phaseolus vulgaris HOM05D006784 ORTHO05D008508 1.9e-104 383.3 288 62.2
BraA07t31326Z Brassica rapa HOM05D006784 ORTHO05D008508 4.7e-103 378.6 327 56.0
Sp5g26500 Schrenkiella parvula HOM05D006784 ORTHO05D008508 6.1e-103 378.3 303 59.7
A07p37620 Brassica napus HOM05D006784 ORTHO05D008508 1.8e-102 376.7 328 55.8
Thhalv10019786m.g Eutrema salsugineum HOM05D006784 ORTHO05D008508 1.8e-102 376.7 298 59.7
VMungo1080G0261 Vigna mungo HOM05D001255 ORTHO05D001246 2.3e-102 376.3 294 58.2
HanXRQChr09g0266871 Helianthus annuus HOM05D006784 ORTHO05D008508 3.0e-102 375.9 300 60.0
AT1G71340 Arabidopsis thaliana HOM05D006784 ORTHO05D008508 6.8e-102 374.8 326 57.1
ECA232G1810 Erigeron canadensis HOM05D006784 ORTHO05D008508 1.2e-101 374.0 296 60.1
BcaB03g14890 Brassica carinata HOM05D006784 ORTHO05D008508 1.5e-101 373.6 327 56.0
AL2G31000 Arabidopsis lyrata HOM05D006784 ORTHO05D008508 2.6e-101 372.9 327 56.0
Carub.0002s1820 Capsella rubella HOM05D006784 ORTHO05D008508 5.7e-101 371.7 298 60.4
Aa31LG4G9210 Aethionema arabicum HOM05D006784 ORTHO05D008508 3.7e-100 369.0 299 59.2
FAN24G3159 Fragaria x ananassa HOM05D006784 ORTHO05D008508 2.4e-99 366.3 270 63.7
Lsat_1_v5_gn_4_133060 Lactuca sativa HOM05D006784 ORTHO05D008508 7.0e-99 364.8 283 60.4
BolC6t39596H Brassica oleracea HOM05D006784 ORTHO05D008508 2.0e-98 363.2 320 55.6
C06p45390 Brassica napus HOM05D006784 ORTHO05D008508 1.3e-97 360.5 320 55.0
Lj7A416T40 Lonicera japonica HOM05D006784 ORTHO05D008508 1.7e-97 360.1 286 60.5
CAN.G567.5 Capsicum annuum HOM05D006784 ORTHO05D008508 2.3e-97 359.8 269 61.3
THA.LOC104809757 Tarenaya hassleriana HOM05D006784 ORTHO05D008508 2.3e-97 359.8 295 58.3
unitig_46.g17979 Utricularia gibba HOM05D006784 ORTHO05D008508 2.3e-97 359.8 297 58.6
BcaC08g46565 Brassica carinata HOM05D006784 ORTHO05D008508 2.9e-97 359.4 320 55.3
HPP92_019449 Vanilla planifolia HOM05D006784 ORTHO05D008508 6.1e-95 351.7 321 52.0
AUR62038543 Chenopodium quinoa HOM05D006784 ORTHO05D008508 1.5e-93 347.1 319 53.9
Nitab4.5_0000079g0180 Nicotiana tabacum HOM05D006784 ORTHO05D008508 4.4e-93 345.5 354 50.8
TWI12G0477 Tripterygium wilfordii HOM05D006784 ORTHO05D008508 4.4e-93 345.5 278 60.4
SEGI_09486 Sequoiadendron giganteum HOM05D006784 ORTHO05D008508 1.7e-92 343.6 297 53.9
Gohir.A05G248533 Gossypium hirsutum HOM05D006784 ORTHO05D008508 1.4e-91 340.5 256 66.4
AUR62013392 Chenopodium quinoa HOM05D006784 ORTHO05D008508 1.8e-91 340.1 319 53.3
Lj3g0009982 Lotus japonicus HOM05D006784 ORTHO05D008508 2.4e-91 339.7 326 51.8
vmacro00953 Vaccinium macrocarpon HOM05D006784 ORTHO05D008508 1.3e-89 334.0 315 54.0
Duzib177G0427 Durio zibethinus HOM05D006784 ORTHO05D008508 1.1e-88 330.9 325 53.2
PGR119G1188 Punica granatum HOM05D006784 ORTHO05D008508 3.5e-82 309.3 327 48.9
Nitab4.5_0001489g0040 Nicotiana tabacum HOM05D006784 ORTHO05D008508 2.1e-79 300.1 300 53.0
CiPaw.03G012700 Carya illinoinensis HOM05D006784 ORTHO05D008508 2.0e-77 293.5 202 67.3
Aqoxy5G01860 Aquilegia oxysepala HOM05D006784 ORTHO05D008508 3.0e-73 279.6 205 62.4
Prupe.8G003500 Prunus persica HOM05D006784 ORTHO05D008508 3.9e-73 279.3 211 62.1
Cpa.g.sc142.7 Carica papaya HOM05D006784 ORTHO05D008508 5.1e-73 278.9 270 55.9
Mapoly0041s0058 Marchantia polymorpha HOM05D006784 ORTHO05D008508 7.3e-72 275.0 316 40.8
Ca_13985_v3 Cicer arietinum L. HOM05D006784 ORTHO05D008508 2.9e-68 263.1 208 57.2
Psat5g232280 Pisum sativum HOM05D006784 ORTHO05D008508 6.4e-68 261.9 213 55.9
SGA_v2.0_scaffold118G32637 Striga asiatica HOM05D006784 ORTHO05D008508 3.5e-66 256.1 334 45.2
Solyc11g045040.2 Solanum lycopersicum HOM05D006784 ORTHO05D008508 6.0e-66 255.4 205 57.6
CDE08G1443 Ceratophyllum demersum HOM05D006784 ORTHO05D008508 1.3e-65 254.2 241 53.5
FAN19G1248 Fragaria x ananassa HOM05D006784 ORTHO05D008508 1.3e-65 254.2 256 53.5
AagrBONN_evm.TU.Sc2ySwM_344.2721 Anthoceros agrestis HOM05D006784 ORTHO05D008508 1.5e-53 214.2 292 37.7
Gohir.D05G250801 Gossypium hirsutum HOM05D006784 ORTHO05D008508 3.8e-52 209.5 180 62.2
TWI12G0001 Tripterygium wilfordii HOM05D006784 ORTHO05D008508 6.0e-50 202.2 282 42.9
Ah.05g170450 Amaranthus hybridus HOM05D006784 ORTHO05D008508 5.6e-48 195.7 292 38.0
Haze_14004 Corylus avellana HOM05D006784 ORTHO05D008508 5.3e-46 189.1 299 38.5
COL.COLO4_25079 Corchorus olitorius HOM05D006784 ORTHO05D008508 9.0e-46 188.3 122 69.7
Zm00001eb167850 Zea mays HOM05D006784 ORTHO05D008508 3.0e-41 173.3 212 40.6
HPP92_019452 Vanilla planifolia HOM05D006784 ORTHO05D008508 2.5e-40 170.2 127 56.7
Cre02.g115750 Chlamydomonas reinhardtii HOM05D006784 ORTHO05D008508 1.0e-36 158.3 295 33.2
Hma1.2p1_0238F.1_g099740 Hydrangea macrophylla HOM05D006784 ORTHO05D008508 1.1e-35 154.8 110 66.4
Peaxi162Scf00078g01023 Petunia axillaris HOM05D006784 ORTHO05D008508 2.5e-35 153.7 142 54.9
FAN20G3191 Fragaria x ananassa HOM05D006784 ORTHO05D008508 7.4e-32 142.1 112 61.6
PGSC0003DMG401006664 Solanum tuberosum HOM05D006784 ORTHO05D008508 1.8e-30 137.5 96 64.6
Peaxi162Scf00078g01017 Petunia axillaris HOM05D006784 ORTHO05D008508 2.4e-30 137.1 96 61.5
Os11g0236000 Oryza sativa ssp. japonica HOM05D006784 ORTHO05D008508 1.9e-27 127.5 80 67.5
PGSC0003DMG402006664 Solanum tuberosum HOM05D006784 ORTHO05D008508 1.9e-27 127.5 91 60.4
CBR_g18896 Chara braunii HOM05D006784 ORTHO05D008508 3.3e-24 116.7 155 36.8
MD05G1006200 Malus domestica HOM05D006784 ORTHO05D008508 9.7e-24 115.2 79 67.1
FvH4_2g04920 Fragaria vesca HOM05D006784 ORTHO05D008508 3.7e-23 113.2 180 38.9
Gorai.005G166200 Gossypium raimondii HOM05D006784 ORTHO05D008508 3.1e-22 110.2 89 64.0
MCO03G046 Micromonas commoda HOM05D006784 ORTHO05D008508 3.1e-22 110.2 293 28.3
Gohir.D08G237350 Gossypium hirsutum HOM05D006784 ORTHO05D008508 5.3e-22 109.4 89 64.0
QL09p001297 Quercus lobata HOM05D006784 ORTHO05D008508 4.6e-18 96.3 86 54.7
Atru.chr7.394 Acer truncatum HOM05D006784 ORTHO05D008508 1.8e-17 94.4 63 65.1
FvH4_2g01030 Fragaria vesca HOM05D006784 ORTHO05D005195 5.5e-11 72.8 135 34.1
FAN20G2921 Fragaria x ananassa HOM05D006784 ORTHO05D008508 2.6e-08 63.9 154 30.5
FAN20G2925 Fragaria x ananassa HOM05D006784 ORTHO05D008508 2.6e-08 63.9 154 30.5
FAN24G0543 Fragaria x ananassa HOM05D006784 ORTHO05D008508 5.7e-08 62.8 154 30.5
FAN20G2451 Fragaria x ananassa HOM05D009889 ORTHO05D003215 3.1e-06 57.0 45 60.0
Gorai.004G102800 Gossypium raimondii HOM05D006784 ORTHO05D008508 3.1e-06 57.0 40 67.5


User provided reference genes

Program Settings