Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO210G0852 Papaver somniferum HOM05D006141 ORTHO05D007670 2.4e-108 395.6 210 100.0
PSO761G0605 Papaver somniferum HOM05D006141 ORTHO05D007670 3.8e-106 388.3 210 98.1
Aqoxy2G02498 Aquilegia oxysepala HOM05D006141 ORTHO05D007670 2.1e-67 259.6 208 71.2
Nn4g25355 Nelumbo nucifera HOM05D006141 ORTHO05D007670 1.9e-65 253.1 210 66.7
MBI18_g10378_MAGBIO Magnolia biondii HOM05D006141 ORTHO05D007670 8.4e-61 237.7 208 66.8
GSVIVG01028253001 Vitis vinifera HOM05D006141 ORTHO05D007670 7.1e-60 234.6 207 63.3
TAR362G0148 Trochodendron aralioides HOM05D006141 ORTHO05D007670 3.5e-59 232.3 206 64.1
Atru.chr5.866 Acer truncatum HOM05D006141 ORTHO05D007670 1.7e-58 229.9 215 63.3
Cfa004908 Carpinus fangiana HOM05D006141 ORTHO05D007670 3.9e-58 228.8 215 62.3
Sopen01g030090 Solanum pennellii HOM05D006141 ORTHO05D007670 3.9e-58 228.8 228 57.9
Glyma.03G224200 Glycine max HOM05D006141 ORTHO05D007670 8.7e-58 227.6 211 62.1
Thecc.01G324800 Theobroma cacao HOM05D006141 ORTHO05D007670 8.7e-58 227.6 211 64.0
Duzib138G1179 Durio zibethinus HOM05D006141 ORTHO05D007670 1.9e-57 226.5 212 64.2
Phvul.001G218100 Phaseolus vulgaris HOM05D006141 ORTHO05D007670 3.3e-57 225.7 214 61.2
Glyma.19G221200 Glycine max HOM05D006141 ORTHO05D007670 5.6e-57 224.9 211 61.6
Nitab4.5_0000222g0340 Nicotiana tabacum HOM05D006141 ORTHO05D007670 5.6e-57 224.9 227 60.8
DCAR_012301 Daucus carota HOM05D006141 ORTHO05D007670 1.6e-56 223.4 214 62.1
Gohir.A08G036900 Gossypium hirsutum HOM05D006141 ORTHO05D007670 4.8e-56 221.9 208 63.0
Solyc01g068150.3 Solanum lycopersicum HOM05D006141 ORTHO05D007670 1.1e-55 220.7 220 57.7
Gohir.D08G047500 Gossypium hirsutum HOM05D006141 ORTHO05D007670 2.4e-55 219.5 208 62.0
Potri.014G112900 Populus trichocarpa HOM05D006141 ORTHO05D007670 2.4e-55 219.5 210 62.9
CDE09G0801 Ceratophyllum demersum HOM05D006141 ORTHO05D007670 6.9e-55 218.0 209 61.2
Ciclev10022224m.g Citrus clementina HOM05D006141 ORTHO05D007670 9.0e-55 217.6 213 60.1
VMungo1383G2247 Vigna mungo HOM05D006141 ORTHO05D007670 1.2e-54 217.2 214 59.3
Gorai.004G046700 Gossypium raimondii HOM05D006141 ORTHO05D007670 1.5e-54 216.9 208 61.5
CiPaw.08G082900 Carya illinoinensis HOM05D006141 ORTHO05D007670 2.6e-54 216.1 215 61.9
Sabra14G0083000 Salix brachista HOM05D006141 ORTHO05D007670 3.4e-54 215.7 205 60.5
Lalb_Chr18g0046401 Lupinus albus HOM05D006141 ORTHO05D007670 9.9e-54 214.2 211 60.7
arahy.Tifrunner.gnm1.ann1.YFT3VK Arachis hypogaea HOM05D006141 ORTHO05D007670 2.2e-53 213.0 229 55.5
arahy.Tifrunner.gnm1.ann1.XETR8R Arachis hypogaea HOM05D006141 ORTHO05D007670 2.9e-53 212.6 229 54.1
CANSAT25G1526 Cannabis sativa HOM05D006141 ORTHO05D007670 2.9e-53 212.6 215 59.5
PGR042G1406 Punica granatum HOM05D006141 ORTHO05D007670 3.8e-53 212.2 209 59.3
QL12p034897 Quercus lobata HOM05D006141 ORTHO05D007670 3.8e-53 212.2 215 58.1
Hma1.2p1_0408F.1_g146310 Hydrangea macrophylla HOM05D006141 ORTHO05D007670 6.4e-53 211.5 213 57.7
TPR.G2465 Trifolium pratense HOM05D006141 ORTHO05D007670 8.4e-53 211.1 213 59.2
Rhsim01G0000200 Rhododendron simsii HOM05D006141 ORTHO05D007670 3.2e-52 209.1 223 58.7
Sed0006054 Sechium edule HOM05D006141 ORTHO05D007670 3.2e-52 209.1 206 59.2
arahy.Tifrunner.gnm1.ann1.3ZI6V8 Arachis hypogaea HOM05D006141 ORTHO05D007670 5.4e-52 208.4 229 53.7
Ca_09244_v3 Cicer arietinum L. HOM05D006141 ORTHO05D007670 5.4e-52 208.4 211 58.3
FAN19G0972 Fragaria x ananassa HOM05D006141 ORTHO05D007670 9.3e-52 207.6 205 60.5
Psat3g016880 Pisum sativum HOM05D006141 ORTHO05D007670 9.3e-52 207.6 212 60.4
ClCG01G007160 Citrullus lanatus HOM05D006141 ORTHO05D007670 2.7e-51 206.1 212 57.1
FAN28G2755 Fragaria x ananassa HOM05D006141 ORTHO05D007670 3.5e-51 205.7 205 60.0
FvH4_1g26260 Fragaria vesca HOM05D006141 ORTHO05D007670 4.6e-51 205.3 204 60.3
FAN23G3136 Fragaria x ananassa HOM05D006141 ORTHO05D007670 6.0e-51 204.9 205 60.0
MD17G1284800 Malus domestica HOM05D006141 ORTHO05D007670 7.8e-51 204.5 216 58.8
Migut.D00015 Erythranthe guttata HOM05D006141 ORTHO05D007670 1.0e-50 204.1 217 55.3
Prupe.3G003000 Prunus persica HOM05D006141 ORTHO05D007670 1.3e-50 203.8 214 57.5
TWI59G0338 Tripterygium wilfordii HOM05D006141 ORTHO05D007670 1.7e-50 203.4 218 58.3
CsaV3_5G018600 Cucumis sativus L. HOM05D006141 ORTHO05D007670 2.3e-50 203.0 213 57.3
RcHm_v2.0_Chr3g0485921 Rosa chinensis HOM05D006141 ORTHO05D007670 2.3e-50 203.0 203 61.1
CSS0000718 Camellia sinensis var. sinensis HOM05D006141 ORTHO05D007670 3.0e-50 202.6 149 69.8
Manes.01G234600 Manihot esculenta HOM05D006141 ORTHO05D007670 3.0e-50 202.6 216 58.3
Medtr7g110620 Medicago truncatula HOM05D006141 ORTHO05D007670 3.0e-50 202.6 216 56.5
SGA_v2.0_scaffold417G51257 Striga asiatica HOM05D006141 ORTHO05D007670 3.0e-50 202.6 212 59.0
MELO3C005194.2 Cucumis melo HOM05D006141 ORTHO05D007670 5.1e-50 201.8 213 57.3
Actinidia20966 Actinidia chinensis HOM05D006141 ORTHO05D007670 8.7e-50 201.1 221 58.4
HanXRQChr06g0167971 Helianthus annuus HOM05D006141 ORTHO05D007670 1.9e-49 199.9 209 58.4
COL.COLO4_23134 Corchorus olitorius HOM05D006141 ORTHO05D007670 9.6e-49 197.6 213 57.3
Carub.0005s2889 Capsella rubella HOM05D006141 ORTHO05D007670 1.6e-48 196.8 213 55.9
Cc01_g21800 Coffea canephora HOM05D006141 ORTHO05D007670 1.6e-48 196.8 212 56.1
AT3G62140 Arabidopsis thaliana HOM05D006141 ORTHO05D007670 2.1e-48 196.4 213 55.9
MSTRG.21729 Avicennia marina HOM05D006141 ORTHO05D007670 2.8e-48 196.1 216 56.0
ECA236G4451 Erigeron canadensis HOM05D006141 ORTHO05D007670 3.6e-48 195.7 215 54.9
AL5G44810 Arabidopsis lyrata HOM05D006141 ORTHO05D007670 8.1e-48 194.5 213 56.3
Peaxi162Scf00309g01021 Petunia axillaris HOM05D006141 ORTHO05D007670 4.0e-47 192.2 229 53.7
Dinv33165 Davidia involucrata HOM05D006141 ORTHO05D007670 6.9e-47 191.4 206 54.4
THA.LOC104817433 Tarenaya hassleriana HOM05D006141 ORTHO05D007670 1.2e-46 190.7 208 56.2
AUR62001013 Chenopodium quinoa HOM05D006141 ORTHO05D007670 1.5e-46 190.3 226 54.4
FAN26G1012 Fragaria x ananassa HOM05D006141 ORTHO05D007670 2.0e-46 189.9 226 54.4
Os01g0321800 Oryza sativa ssp. japonica HOM05D006141 ORTHO05D007670 2.0e-46 189.9 200 55.5
Thhalv10006233m.g Eutrema salsugineum HOM05D006141 ORTHO05D007670 2.6e-46 189.5 214 54.2
CARHR172480 Cardamine hirsuta HOM05D006141 ORTHO05D007670 3.4e-46 189.1 201 56.2
HPP92_018284 Vanilla planifolia HOM05D006141 ORTHO05D007670 3.4e-46 189.1 207 55.6
SalBow6G5482 Salvia bowleyana HOM05D006141 ORTHO05D007670 2.9e-45 186.0 207 51.7
Aa31LG10G16170 Aethionema arabicum HOM05D006141 ORTHO05D007670 6.4e-45 184.9 208 54.3
ATR0796G189 Amborella trichopoda HOM05D006141 ORTHO05D007670 8.4e-45 184.5 207 53.6
AUR62004945 Chenopodium quinoa HOM05D006141 ORTHO05D007670 1.4e-44 183.7 223 52.9
Ah.11g045950 Amaranthus hybridus HOM05D006141 ORTHO05D007670 1.2e-43 180.6 221 52.9
Hma1.2p1_0408F.1_g146320 Hydrangea macrophylla HOM05D006141 ORTHO05D007670 1.2e-43 180.6 119 74.8
EL10Ac6g14128 Beta vulgaris HOM05D006141 ORTHO05D007670 7.9e-43 177.9 217 53.0
Lsat_1_v5_gn_8_167241 Lactuca sativa HOM05D006141 ORTHO05D007670 1.0e-42 177.6 201 56.2
Sp5g01230 Schrenkiella parvula HOM05D006141 ORTHO05D007670 5.1e-42 175.3 214 53.7
BcaC07g40706 Brassica carinata HOM05D006141 ORTHO05D007670 1.5e-41 173.7 214 54.2
C06p28110 Brassica napus HOM05D006141 ORTHO05D007670 1.6e-40 170.2 207 50.2
BolC6t37977H Brassica oleracea HOM05D006141 ORTHO05D007670 1.6e-40 170.2 207 50.2
unitig_578.g16642 Utricularia gibba HOM05D006141 ORTHO05D007670 2.1e-40 169.9 207 49.3
C08p37090 Brassica napus HOM05D006141 ORTHO05D007670 3.7e-40 169.1 211 52.6
BolC8t51287H Brassica oleracea HOM05D006141 ORTHO05D007670 3.7e-40 169.1 211 52.6
Cpa.g.sc57.10 Carica papaya HOM05D006141 ORTHO05D007670 6.2e-40 168.3 128 68.8
A09p54230 Brassica napus HOM05D006141 ORTHO05D007670 1.1e-39 167.5 212 52.8
BraA09t40835Z Brassica rapa HOM05D006141 ORTHO05D007670 1.1e-39 167.5 212 52.8
BcaB02g07358 Brassica carinata HOM05D002572 ORTHO05D002800 2.4e-39 166.4 191 52.4
Zm00001eb340460 Zea mays HOM05D006141 ORTHO05D007670 5.3e-39 165.2 122 68.0
CAN.G100.55 Capsicum annuum HOM05D006141 ORTHO05D007670 9.0e-39 164.5 117 70.1
A07p25870 Brassica napus HOM05D006141 ORTHO05D007670 2.0e-38 163.3 207 48.8
SEGI_07518 Sequoiadendron giganteum HOM05D006141 ORTHO05D007670 1.3e-37 160.6 206 50.5
Rhsim01G0080900 Rhododendron simsii HOM05D006141 ORTHO05D007670 6.5e-37 158.3 174 54.6
BcaC08g45187 Brassica carinata HOM05D006141 ORTHO05D007670 2.3e-34 149.8 127 62.2
Rhsim01G0085900 Rhododendron simsii HOM05D006141 ORTHO05D007670 1.4e-31 140.6 204 46.6
Lj1g0014608 Lotus japonicus HOM05D006141 ORTHO05D007670 6.5e-29 131.7 216 44.4
BcaB02g07360 Brassica carinata HOM05D006141 ORTHO05D007670 2.7e-27 126.3 89 69.7
BraA07t30234Z Brassica rapa HOM05D006141 ORTHO05D007670 1.3e-26 124.0 86 70.9
Lj2A1216T56 Lonicera japonica HOM05D006141 ORTHO05D007670 5.7e-25 118.6 82 70.7
Ciclev10030010m.g Citrus clementina HOM05D006141 ORTHO05D007670 6.3e-24 115.2 223 41.3
Ciclev10030249m.g Citrus clementina HOM05D006141 ORTHO05D007670 6.3e-24 115.2 186 44.1
Ciclev10030079m.g Citrus clementina HOM05D006141 ORTHO05D007670 8.2e-24 114.8 177 44.1
Rhsim01G0086800 Rhododendron simsii HOM05D006141 ORTHO05D007670 3.1e-23 112.8 205 43.4
Pp3c2_35190 Physcomitrium patens HOM05D006141 ORTHO05D007670 6.9e-23 111.7 199 41.2
Mapoly0026s0067 Marchantia polymorpha HOM05D006141 ORTHO05D007670 2.0e-22 110.2 205 39.0
Rhsim12G0140700 Rhododendron simsii HOM05D006141 ORTHO05D007670 5.7e-17 92.0 156 47.4
SHI33165 Sapria himalayana HOM05D006141 ORTHO05D007670 7.4e-17 91.7 132 40.9
Rhsim01G0082900 Rhododendron simsii HOM05D006141 ORTHO05D007670 2.6e-14 83.2 167 38.3
Nitab4.5_0008976g0040 Nicotiana tabacum HOM05D006141 ORTHO05D007670 2.9e-13 79.7 130 48.5
Haze_05144 Corylus avellana HOM05D006141 ORTHO05D007670 2.7e-11 73.2 218 37.2
AagrBONN_evm.TU.Sc2ySwM_368.766 Anthoceros agrestis HOM05D006141 ORTHO05D007670 1.0e-10 71.2 145 40.7
CBR_g57079 Chara braunii HOM05D006141 ORTHO05D007670 1.4e-10 70.9 208 32.7
FAN03G1225 Fragaria x ananassa HOM05D006141 ORTHO05D007670 5.1e-10 68.9 44 68.2
Rhsim01G0081900 Rhododendron simsii HOM05D006141 ORTHO05D007670 5.1e-10 68.9 56 60.7
BcaC09g48717 Brassica carinata HOM05D001214 ORTHO05D001029 4.4e-09 65.9 45 68.9
DCAR_012300 Daucus carota HOM05D006141 ORTHO05D007670 9.7e-09 64.7 46 69.6
MCO02G477 Micromonas commoda HOM05D006141 ORTHO05D007670 4.8e-08 62.4 98 36.7
Rhsim01G0083000 Rhododendron simsii HOM05D006141 ORTHO05D007670 5.9e-06 55.5 99 44.4


User provided reference genes

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