Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO210G0805 Papaver somniferum HOM05D006603 ORTHO05D007786 5.8e-72 274.2 151 100.0
PSO210G7184 Papaver somniferum HOM05D006603 ORTHO05D007786 9.3e-70 266.9 153 97.4
TAR633G2131 Trochodendron aralioides HOM05D006603 ORTHO05D007786 8.2e-42 174.1 148 66.2
Aqoxy2G03755 Aquilegia oxysepala HOM05D006603 ORTHO05D007786 1.1e-41 173.7 147 66.7
Actinidia39936 Actinidia chinensis HOM05D006603 ORTHO05D007786 4.1e-41 171.8 144 66.7
MBI10_g39247_MAGBIO Magnolia biondii HOM05D006603 ORTHO05D007786 4.1e-41 171.8 143 65.0
Actinidia11378 Actinidia chinensis HOM05D006603 ORTHO05D007786 5.3e-41 171.4 144 66.7
Dinv29792 Davidia involucrata HOM05D006603 ORTHO05D007786 3.4e-40 168.7 147 63.9
CSS0001604 Camellia sinensis var. sinensis HOM05D006603 ORTHO05D007786 1.7e-39 166.4 142 64.8
CiPaw.01G176600 Carya illinoinensis HOM05D006603 ORTHO05D007786 1.2e-37 160.2 144 63.2
Manes.03G157300 Manihot esculenta HOM05D006603 ORTHO05D007786 1.1e-35 153.7 144 64.6
EL10Ac3g06681 Beta vulgaris HOM05D006603 ORTHO05D007786 1.9e-35 152.9 144 59.7
Ca_25848_v3 Cicer arietinum L. HOM05D006603 ORTHO05D007786 9.7e-35 150.6 147 60.5
Hma1.2p1_0112F.1_g054890 Hydrangea macrophylla HOM05D006603 ORTHO05D007786 1.3e-34 150.2 141 58.2
vmacro15486 Vaccinium macrocarpon HOM05D006603 ORTHO05D007786 1.6e-34 149.8 167 58.1
Medtr1g045660 Medicago truncatula HOM05D006603 ORTHO05D007786 2.2e-34 149.4 144 59.7
Psat6g018400 Pisum sativum HOM05D006603 ORTHO05D007786 6.3e-34 147.9 143 60.8
ATR0787G168 Amborella trichopoda HOM05D006603 ORTHO05D007786 8.2e-34 147.5 143 60.8
GSVIVG01027941001 Vitis vinifera HOM05D006603 ORTHO05D007786 1.1e-33 147.1 138 63.0
Lalb_Chr03g0036931 Lupinus albus HOM05D006603 ORTHO05D007786 1.4e-33 146.7 143 58.0
Sc25g0004840 Simmondsia chinensis HOM05D006603 ORTHO05D007786 1.4e-33 146.7 143 57.3
TWI09G1292 Tripterygium wilfordii HOM05D006603 ORTHO05D007786 2.4e-33 146.0 143 60.1
Ciclev10006126m.g Citrus clementina HOM05D006603 ORTHO05D007786 3.1e-33 145.6 146 58.9
Glyma.20G082000 Glycine max HOM05D006603 ORTHO05D007786 4.1e-33 145.2 143 59.4
CANSAT78G1588 Cannabis sativa HOM05D006603 ORTHO05D007786 1.5e-32 143.3 146 58.9
TWI73G0993 Tripterygium wilfordii HOM05D006603 ORTHO05D007786 1.5e-32 143.3 143 56.6
Lj6g0018890 Lotus japonicus HOM05D006603 ORTHO05D007786 2.0e-32 142.9 143 56.6
MELO3C023048.2 Cucumis melo HOM05D006603 ORTHO05D007786 5.9e-32 141.4 144 58.3
TPR.G23967 Trifolium pratense HOM05D006603 ORTHO05D007786 5.9e-32 141.4 144 56.9
FvH4_4g05040 Fragaria vesca HOM05D006603 ORTHO05D007786 1.3e-31 140.2 142 57.0
Potri.008G173000 Populus trichocarpa HOM05D006603 ORTHO05D007786 1.3e-31 140.2 143 57.3
Thecc.04G267600 Theobroma cacao HOM05D006603 ORTHO05D007786 1.3e-31 140.2 143 58.7
Phvul.007G231900 Phaseolus vulgaris HOM05D006603 ORTHO05D007786 2.9e-31 139.0 145 57.2
RcHm_v2.0_Chr4g0395941 Rosa chinensis HOM05D006603 ORTHO05D007786 3.8e-31 138.7 143 60.8
Cc03_g06500 Coffea canephora HOM05D006603 ORTHO05D007786 8.5e-31 137.5 141 60.3
Eucgr.H02902 Eucalyptus grandis HOM05D006603 ORTHO05D007786 1.1e-30 137.1 141 57.4
MD16G1228700 Malus domestica HOM05D006603 ORTHO05D007786 1.1e-30 137.1 140 60.0
FAN12G4195 Fragaria x ananassa HOM05D006603 ORTHO05D007786 1.4e-30 136.7 142 56.3
CsaV3_2G012360 Cucumis sativus L. HOM05D006603 ORTHO05D007786 1.9e-30 136.3 144 56.9
Gohir.A09G230800 Gossypium hirsutum HOM05D006603 ORTHO05D007786 5.5e-30 134.8 141 56.7
Gohir.D09G231900 Gossypium hirsutum HOM05D006603 ORTHO05D007786 5.5e-30 134.8 141 56.7
Potri.010G064500 Populus trichocarpa HOM05D006603 ORTHO05D007786 5.5e-30 134.8 145 56.6
MD13G1223900 Malus domestica HOM05D006603 ORTHO05D007786 7.2e-30 134.4 140 59.3
PGR004G2303 Punica granatum HOM05D006603 ORTHO05D007786 2.7e-29 132.5 145 53.8
Duzib151G0118 Durio zibethinus HOM05D006603 ORTHO05D007786 7.9e-29 131.0 137 59.1
THA.LOC104816009 Tarenaya hassleriana HOM05D006603 ORTHO05D007786 7.9e-29 131.0 141 56.0
Manes.15G046500 Manihot esculenta HOM05D006603 ORTHO05D007786 1.0e-28 130.6 136 58.8
Carub.0001s0377 Capsella rubella HOM05D006603 ORTHO05D007786 1.4e-28 130.2 140 56.4
FAN22G1779 Fragaria x ananassa HOM05D006603 ORTHO05D007786 1.4e-28 130.2 142 54.2
arahy.Tifrunner.gnm1.ann1.T2GGRX Arachis hypogaea HOM05D006603 ORTHO05D007786 1.8e-28 129.8 169 51.5
Hund22279 Selenicereus undatus HOM05D006603 ORTHO05D007786 3.0e-28 129.0 141 54.6
AUR62018035 Chenopodium quinoa HOM05D006603 ORTHO05D007786 5.1e-28 128.3 121 53.7
Lsat_1_v5_gn_1_75441 Lactuca sativa HOM05D006603 ORTHO05D007786 8.8e-28 127.5 148 52.7
Nitab4.5_0005154g0030 Nicotiana tabacum HOM05D006603 ORTHO05D007786 8.8e-28 127.5 137 56.9
arahy.Tifrunner.gnm1.ann1.GIKJ41 Arachis hypogaea HOM05D006603 ORTHO05D007786 1.1e-27 127.1 169 50.3
Duzib212G0187 Durio zibethinus HOM05D006603 ORTHO05D007786 1.1e-27 127.1 142 56.3
HanXRQChr01g0023081 Helianthus annuus HOM05D006603 ORTHO05D007786 1.1e-27 127.1 151 51.7
AUR62015239 Chenopodium quinoa HOM05D006603 ORTHO05D007786 2.0e-27 126.3 118 54.2
Thhalv10009014m.g Eutrema salsugineum HOM05D006603 ORTHO05D007786 2.6e-27 125.9 140 55.7
Peaxi162Scf00531g00210 Petunia axillaris HOM05D006603 ORTHO05D007786 4.4e-27 125.2 146 54.1
CAN.G812.23 Capsicum annuum HOM05D006603 ORTHO05D007786 7.4e-27 124.4 139 56.8
Rhsim02G0047700 Rhododendron simsii HOM05D006603 ORTHO05D007786 2.8e-26 122.5 118 59.3
BolC5t29054H Brassica oleracea HOM05D006603 ORTHO05D007786 3.7e-26 122.1 140 52.9
AT1G04555 Arabidopsis thaliana HOM05D006603 ORTHO05D007786 4.8e-26 121.7 142 53.5
ECA248G1661 Erigeron canadensis HOM05D006603 ORTHO05D007786 8.2e-26 120.9 135 54.1
Os02g0816700 Oryza sativa ssp. japonica HOM05D006603 ORTHO05D007786 8.2e-26 120.9 137 52.6
AL1G14230 Arabidopsis lyrata HOM05D006603 ORTHO05D007786 1.1e-25 120.6 142 54.2
CDE04G0122 Ceratophyllum demersum HOM05D006603 ORTHO05D007786 2.4e-25 119.4 144 54.2
Aa31LG1G20320 Aethionema arabicum HOM05D006603 ORTHO05D007786 4.1e-25 118.6 141 56.0
BraA10t42567Z Brassica rapa HOM05D006603 ORTHO05D007786 5.3e-25 118.2 141 52.5
Sopen09g033770 Solanum pennellii HOM05D006603 ORTHO05D007786 6.9e-25 117.9 137 54.0
Oeu059390.1 Olea europaea HOM05D006603 ORTHO05D007786 1.2e-24 117.1 148 52.0
QL06p021600 Quercus lobata HOM05D006603 ORTHO05D007786 1.2e-24 117.1 96 68.8
Sp1g03390 Schrenkiella parvula HOM05D006603 ORTHO05D007786 1.2e-24 117.1 147 50.3
MSTRG.9849 Avicennia marina HOM05D006603 ORTHO05D007786 2.0e-24 116.3 148 52.0
Haze_11482 Corylus avellana HOM05D006603 ORTHO05D007786 5.9e-24 114.8 95 69.5
BcaNung06560 Brassica carinata HOM05D006603 ORTHO05D007786 2.2e-23 112.8 140 52.9
PGSC0003DMG400001502 Solanum tuberosum HOM05D006603 ORTHO05D007786 2.2e-23 112.8 137 51.1
Zm00001eb191430 Zea mays HOM05D006603 ORTHO05D007786 8.5e-23 110.9 97 67.0
Cfa014798 Carpinus fangiana HOM05D006603 ORTHO05D007786 1.1e-22 110.5 93 68.8
Migut.G00559 Erythranthe guttata HOM05D006603 ORTHO05D007786 1.1e-22 110.5 152 48.0
CARHR003900 Cardamine hirsuta HOM05D006603 ORTHO05D007786 1.4e-22 110.2 134 53.0
Ah.04g153810 Amaranthus hybridus HOM05D006603 ORTHO05D007786 4.2e-22 108.6 116 55.2
SGA_v2.0_scaffold147G36268 Striga asiatica HOM05D006603 ORTHO05D007786 5.5e-22 108.2 140 52.9
BolC8t46925H Brassica oleracea HOM05D006603 ORTHO05D007786 1.2e-21 107.1 147 46.9
BolC8t46924H Brassica oleracea HOM05D006603 ORTHO05D007786 2.1e-21 106.3 142 48.6
Sed0025873 Sechium edule HOM05D006603 ORTHO05D007786 2.7e-21 105.9 119 52.9
VMungo0720G0308 Vigna mungo HOM05D006603 ORTHO05D007786 3.6e-21 105.5 113 56.6
BolC8t46928H Brassica oleracea HOM05D006603 ORTHO05D007786 7.9e-21 104.4 143 49.0
ClCG06G007300 Citrullus lanatus HOM05D006603 ORTHO05D007786 1.8e-20 103.2 148 47.3
BolC8t46922H Brassica oleracea HOM05D006603 ORTHO05D007786 2.3e-20 102.8 143 48.3
BcaC07g36903 Brassica carinata HOM05D006603 ORTHO05D007786 3.0e-20 102.4 139 50.4
Prupe.1G050700 Prunus persica HOM05D006603 ORTHO05D007786 6.7e-20 101.3 96 64.6
FAN17G1046 Fragaria x ananassa HOM05D006603 ORTHO05D007786 8.8e-20 100.9 96 61.5
Sabra08G0132100 Salix brachista HOM05D006603 ORTHO05D007786 8.8e-20 100.9 93 63.4
COL.COLO4_15990 Corchorus olitorius HOM05D006603 ORTHO05D007786 3.3e-19 99.0 117 53.0
A08p36880 Brassica napus HOM05D006603 ORTHO05D007786 4.4e-19 98.6 143 47.6
Gorai.006G254700 Gossypium raimondii HOM05D006603 ORTHO05D007786 7.4e-19 97.8 116 51.7
DCAR_027355 Daucus carota HOM05D004511 ORTHO05D005348 1.4e-17 93.6 93 60.2
Solyc09g090820.4 Solanum lycopersicum HOM05D006603 ORTHO05D007786 2.4e-17 92.8 89 61.8
Cfa014800 Carpinus fangiana HOM05D006603 ORTHO05D007786 4.1e-17 92.0 81 66.7
Nn1g02998 Nelumbo nucifera HOM05D006603 ORTHO05D007786 4.1e-17 92.0 78 59.0
Dinv27124 Davidia involucrata HOM05D006603 ORTHO05D007786 9.1e-17 90.9 80 67.5
HPP92_020757 Vanilla planifolia HOM05D006603 ORTHO05D007786 2.0e-16 89.7 146 40.4
BcaB03g13488 Brassica carinata HOM05D006603 ORTHO05D007786 1.0e-15 87.4 124 46.0
C05p02730 Brassica napus HOM05D001210 ORTHO05D001036 1.0e-15 87.4 112 49.1
C08p01190 Brassica napus HOM05D003335 ORTHO05D003853 8.5e-15 84.3 101 56.4
BolC8t52747H Brassica oleracea HOM05D000117 ORTHO05D007786 8.5e-15 84.3 134 45.5
Nitab4.5_0001041g0010 Nicotiana tabacum HOM05D006603 ORTHO05D007786 1.5e-14 83.6 115 51.3
BraA09t42112Z Brassica rapa HOM05D000117 ORTHO05D007786 1.9e-14 83.2 97 57.7
BraA08t35589Z Brassica rapa HOM05D003335 ORTHO05D003853 7.2e-14 81.3 96 57.3
unitig_32.g11693 Utricularia gibba HOM05D006603 ORTHO05D007786 2.1e-13 79.7 177 36.7
arahy.Tifrunner.gnm1.ann1.QP5CHE Arachis hypogaea HOM05D006603 ORTHO05D007786 1.5e-11 73.6 125 44.8
SalBow2G0496 Salvia bowleyana HOM05D006603 ORTHO05D007786 2.6e-11 72.8 118 44.9
GSVIVG01027940001 Vitis vinifera HOM05D006603 ORTHO05D015671 2.6e-11 72.8 94 53.2
arahy.Tifrunner.gnm1.ann1.YUK4FD Arachis hypogaea HOM05D006603 ORTHO05D007786 2.2e-10 69.7 141 41.8
Cpa.g.sc59.20 Carica papaya HOM05D006603 ORTHO05D007786 2.2e-10 69.7 72 54.2
arahy.Tifrunner.gnm1.ann1.M12JR8 Arachis hypogaea HOM05D006603 ORTHO05D007786 3.1e-09 65.9 135 40.7
arahy.Tifrunner.gnm1.ann1.N50CGY Arachis hypogaea HOM05D006603 ORTHO05D007786 1.3e-07 60.5 95 46.3
Mapoly0020s0146 Marchantia polymorpha HOM05D002103 ORTHO05D007786 3.8e-07 58.9 147 34.7
Gohir.D06G015300 Gossypium hirsutum HOM05D002103 ORTHO05D004020 6.5e-07 58.2 140 33.6
A09p67800 Brassica napus HOM05D000117 ORTHO05D001036 8.5e-07 57.8 68 55.9
Gohir.A06G017200 Gossypium hirsutum HOM05D002103 ORTHO05D004020 1.1e-06 57.4 140 32.9
Sabra10G0042500 Salix brachista HOM05D006603 ORTHO05D007786 1.1e-06 57.4 57 59.6
arahy.Tifrunner.gnm1.ann1.49WF5R Arachis hypogaea HOM05D006603 ORTHO05D007786 3.2e-06 55.8 86 47.7
C08p52130 Brassica napus HOM05D000117 ORTHO05D001036 4.2e-06 55.5 68 50.0
SMO271G0137 Selaginella moellendorffii HOM05D002103 ORTHO05D004020 7.2e-06 54.7 147 32.7
TWI36G1154 Tripterygium wilfordii HOM05D002103 ORTHO05D004020 9.4e-06 54.3 136 27.9


User provided reference genes

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