Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO210G0761 Papaver somniferum HOM05D006169 ORTHO05D007698 6.9e-156 553.9 273 100.0
PSO832G1922 Papaver somniferum HOM05D006169 ORTHO05D007698 1.3e-146 523.1 267 97.0
Aqoxy5G00801 Aquilegia oxysepala HOM05D006169 ORTHO05D007698 3.7e-101 372.1 248 74.2
Manes.08G114800 Manihot esculenta HOM05D006169 ORTHO05D007698 1.6e-99 366.7 263 70.7
Ciclev10001820m.g Citrus clementina HOM05D006169 ORTHO05D007698 5.0e-98 361.7 254 70.1
Peaxi162Scf00484g00066 Petunia axillaris HOM05D006169 ORTHO05D007698 4.2e-97 358.6 247 69.2
Potri.013G012400 Populus trichocarpa HOM05D006169 ORTHO05D007698 5.5e-97 358.2 262 67.2
GSVIVG01031157001 Vitis vinifera HOM05D006169 ORTHO05D007698 2.1e-96 356.3 235 72.8
Hma1.2p1_1441F.1_g283670 Hydrangea macrophylla HOM05D006169 ORTHO05D007698 1.8e-95 353.2 252 68.3
Nitab4.5_0001266g0050 Nicotiana tabacum HOM05D006169 ORTHO05D007698 3.0e-95 352.4 254 68.9
QL03p019145 Quercus lobata HOM05D006169 ORTHO05D007698 4.0e-95 352.1 220 75.0
DCAR_029375 Daucus carota HOM05D006169 ORTHO05D007698 6.7e-95 351.3 250 67.6
SalBow3G0569 Salvia bowleyana HOM05D006169 ORTHO05D007698 6.7e-95 351.3 261 67.0
Phvul.007G198500 Phaseolus vulgaris HOM05D006169 ORTHO05D007698 1.2e-94 350.5 210 78.1
CAN.G813.8 Capsicum annuum HOM05D006169 ORTHO05D007698 1.5e-94 350.1 212 76.4
Ca_10150_v3 Cicer arietinum L. HOM05D006169 ORTHO05D007698 2.0e-94 349.7 259 68.3
FvH4_6g06920 Fragaria vesca HOM05D006169 ORTHO05D007698 2.6e-94 349.4 251 67.7
Glyma.10G150300 Glycine max HOM05D006169 ORTHO05D007698 3.3e-94 349.0 212 77.8
Lj9C200T3 Lonicera japonica HOM05D006169 ORTHO05D007698 5.7e-94 348.2 267 65.2
HanXRQChr06g0182151 Helianthus annuus HOM05D006169 ORTHO05D007698 9.7e-94 347.4 270 65.9
Rhsim05G0136600 Rhododendron simsii HOM05D006169 ORTHO05D007698 9.7e-94 347.4 213 77.5
CANSAT54G3053 Cannabis sativa HOM05D006169 ORTHO05D007698 1.3e-93 347.1 259 68.3
RcHm_v2.0_Chr3g0456451 Rosa chinensis HOM05D006169 ORTHO05D007698 1.7e-93 346.7 250 68.4
Eucgr.L02153 Eucalyptus grandis HOM05D006169 ORTHO05D007698 2.2e-93 346.3 261 65.9
CsaV3_2G006780 Cucumis sativus L. HOM05D006169 ORTHO05D007698 2.8e-93 345.9 215 76.7
Migut.N02103 Erythranthe guttata HOM05D006169 ORTHO05D007698 2.8e-93 345.9 257 67.3
Duzib177G0247 Durio zibethinus HOM05D006169 ORTHO05D007698 3.7e-93 345.5 263 65.8
Actinidia02688 Actinidia chinensis HOM05D006169 ORTHO05D007698 4.8e-93 345.1 251 69.7
Cc02_g34500 Coffea canephora HOM05D006169 ORTHO05D007698 6.3e-93 344.7 249 67.9
Lj5g0023338 Lotus japonicus HOM05D006169 ORTHO05D007698 8.3e-93 344.4 233 70.4
PGR031G2380 Punica granatum HOM05D006169 ORTHO05D007698 1.1e-92 344.0 249 67.5
MD04G1197600 Malus domestica HOM05D006169 ORTHO05D007698 1.4e-92 343.6 210 76.7
Sabra13G0011000 Salix brachista HOM05D006169 ORTHO05D007698 1.8e-92 343.2 295 60.7
Thecc.05G316900 Theobroma cacao HOM05D006169 ORTHO05D007698 2.4e-92 342.8 256 68.4
Eucgr.H03261 Eucalyptus grandis HOM05D006169 ORTHO05D007698 3.1e-92 342.4 254 66.9
Medtr1g083600 Medicago truncatula HOM05D006169 ORTHO05D007698 4.1e-92 342.0 213 74.6
arahy.Tifrunner.gnm1.ann1.NVQ69B Arachis hypogaea HOM05D006169 ORTHO05D007698 1.2e-91 340.5 274 62.8
Sed0028110 Sechium edule HOM05D006169 ORTHO05D007698 1.2e-91 340.5 255 67.8
Gorai.007G302700 Gossypium raimondii HOM05D006169 ORTHO05D007698 1.6e-91 340.1 257 65.4
THA.LOC104802790 Tarenaya hassleriana HOM05D006169 ORTHO05D007698 1.6e-91 340.1 249 68.7
Gohir.A11G270300 Gossypium hirsutum HOM05D006169 ORTHO05D007698 2.0e-91 339.7 269 63.6
MELO3C004212.2 Cucumis melo HOM05D006169 ORTHO05D007698 2.7e-91 339.3 215 75.8
Sopen10g013390 Solanum pennellii HOM05D006169 ORTHO05D007698 2.7e-91 339.3 216 75.0
Atru.chr5.1841 Acer truncatum HOM05D006169 ORTHO05D007698 4.5e-91 338.6 262 64.5
TWI56G0200 Tripterygium wilfordii HOM05D006169 ORTHO05D007698 4.5e-91 338.6 258 65.9
Solyc10g044710.2 Solanum lycopersicum HOM05D006169 ORTHO05D007698 5.9e-91 338.2 216 74.5
Sc14g0006600 Simmondsia chinensis HOM05D006169 ORTHO05D007698 1.0e-90 337.4 263 65.0
COL.COLO4_10563 Corchorus olitorius HOM05D006169 ORTHO05D007698 1.7e-90 336.7 247 68.4
Gohir.D11G280500 Gossypium hirsutum HOM05D006169 ORTHO05D007698 2.9e-90 335.9 269 62.8
Lsat_1_v5_gn_7_73300 Lactuca sativa HOM05D006169 ORTHO05D007698 3.8e-90 335.5 256 66.4
Eucgr.H04522 Eucalyptus grandis HOM05D006169 ORTHO05D007698 6.5e-90 334.7 257 65.4
SGA_v2.0_scaffold81G26108 Striga asiatica HOM05D006169 ORTHO05D007698 8.5e-90 334.3 256 65.2
ECA236G4200 Erigeron canadensis HOM05D006169 ORTHO05D007698 1.5e-89 333.6 256 64.8
AUR62000726 Chenopodium quinoa HOM05D006169 ORTHO05D007698 1.9e-89 333.2 229 69.0
Haze_04109 Corylus avellana HOM05D006169 ORTHO05D007698 8.0e-88 327.8 266 62.8
Lalb_Chr06g0167751 Lupinus albus HOM05D006169 ORTHO05D007698 1.8e-87 326.6 255 64.7
CDE05G1145 Ceratophyllum demersum HOM05D006169 ORTHO05D007698 1.2e-86 323.9 270 62.2
Sp3g04510 Schrenkiella parvula HOM05D006169 ORTHO05D007698 2.6e-86 322.8 215 72.6
Thhalv10021364m.g Eutrema salsugineum HOM05D006169 ORTHO05D007698 4.4e-86 322.0 212 72.6
A03p34240 Brassica napus HOM05D006169 ORTHO05D007698 1.3e-85 320.5 222 70.7
BraA03t12598Z Brassica rapa HOM05D006169 ORTHO05D007698 1.3e-85 320.5 222 70.7
AT3G05625 Arabidopsis thaliana HOM05D006169 ORTHO05D007698 1.7e-85 320.1 212 71.7
Carub.0003s0495 Capsella rubella HOM05D006169 ORTHO05D007698 2.8e-85 319.3 213 72.3
AL3G16270 Arabidopsis lyrata HOM05D006169 ORTHO05D007698 6.3e-85 318.2 212 72.2
BcaB04g19252 Brassica carinata HOM05D006169 ORTHO05D007698 1.1e-84 317.4 222 69.8
CARHR080070 Cardamine hirsuta HOM05D006169 ORTHO05D007698 1.8e-84 316.6 212 71.7
BolC3t16445H Brassica oleracea HOM05D006169 ORTHO05D007698 4.1e-84 315.5 244 65.6
BcaB04g19251 Brassica carinata HOM05D006169 ORTHO05D007698 9.1e-84 314.3 212 71.2
Nn3g21567 Nelumbo nucifera HOM05D006169 ORTHO05D007698 1.6e-83 313.5 270 62.2
Ah.04g161300 Amaranthus hybridus HOM05D006169 ORTHO05D007698 2.7e-83 312.8 229 68.1
Aa31LG5G16050 Aethionema arabicum HOM05D006169 ORTHO05D007698 3.5e-83 312.4 221 67.9
ATR0693G261 Amborella trichopoda HOM05D006169 ORTHO05D007698 3.5e-83 312.4 200 75.0
unitig_0.g2320 Utricularia gibba HOM05D006169 ORTHO05D007698 1.1e-81 307.4 218 67.4
TPR.G17714 Trifolium pratense HOM05D006169 ORTHO05D007698 2.5e-81 306.2 177 79.1
HPP92_016954 Vanilla planifolia HOM05D006169 ORTHO05D007698 2.5e-81 306.2 215 68.4
HPP92_016950 Vanilla planifolia HOM05D006169 ORTHO05D007698 7.2e-81 304.7 217 67.7
C03p41640 Brassica napus HOM05D006169 ORTHO05D007698 3.6e-80 302.4 236 65.3
MBI18_g25080_MAGBIO Magnolia biondii HOM05D006169 ORTHO05D007698 4.7e-80 302.0 232 68.1
Cfa006660 Carpinus fangiana HOM05D006169 ORTHO05D007698 2.3e-79 299.7 240 66.7
ClCG02G015230 Citrullus lanatus HOM05D006169 ORTHO05D007698 2.6e-78 296.2 247 63.2
CiPaw.08G158800 Carya illinoinensis HOM05D006169 ORTHO05D007698 3.4e-78 295.8 252 59.9
Prupe.6G318000 Prunus persica HOM05D006169 ORTHO05D007698 7.5e-78 294.7 254 59.4
FAN14G4015 Fragaria x ananassa HOM05D006169 ORTHO05D007698 1.3e-77 293.9 171 78.9
Hma1.2p1_1441F.1_g283680 Hydrangea macrophylla HOM05D006169 ORTHO05D007698 2.2e-77 293.1 212 68.9
SEGI_23594 Sequoiadendron giganteum HOM05D006169 ORTHO05D007698 8.3e-77 291.2 213 66.2
BcaB04g19253 Brassica carinata HOM05D006169 ORTHO05D007698 4.1e-76 288.9 212 67.0
CDE11G0042 Ceratophyllum demersum HOM05D006169 ORTHO05D007698 9.2e-76 287.7 223 62.8
EL10Ac4g09881 Beta vulgaris HOM05D006169 ORTHO05D007698 1.2e-75 287.3 245 61.6
FAN09G1827 Fragaria x ananassa HOM05D006169 ORTHO05D007698 5.9e-75 285.0 255 57.6
Hund07115 Selenicereus undatus HOM05D006169 ORTHO05D007698 3.9e-74 282.3 217 65.4
AUR62005238 Chenopodium quinoa HOM05D006169 ORTHO05D007698 9.5e-73 277.7 168 74.4
Cpa.g.sc48.120 Carica papaya HOM05D006169 ORTHO05D007698 1.8e-71 273.5 308 51.6
Dinv24403 Davidia involucrata HOM05D006169 ORTHO05D007698 8.3e-69 264.6 187 71.7
Pp3c1_33190 Physcomitrium patens HOM05D006169 ORTHO05D007698 2.4e-68 263.1 192 65.6
Oeu048884.1 Olea europaea HOM05D006169 ORTHO05D007698 3.2e-68 262.7 195 69.7
ClCG00G004550 Citrullus lanatus HOM05D006169 ORTHO05D007698 1.2e-67 260.8 328 47.6
Psat6g151520 Pisum sativum HOM05D006169 ORTHO05D007698 1.0e-66 257.7 190 66.3
Zm00001eb340780 Zea mays HOM05D006169 ORTHO05D007698 7.3e-65 251.5 174 67.8
Actinidia19770 Actinidia chinensis HOM05D006169 ORTHO05D007698 8.0e-64 248.1 169 74.6
arahy.Tifrunner.gnm1.ann1.X8FEVW Arachis hypogaea HOM05D006169 ORTHO05D007698 1.1e-63 247.7 195 64.1
Mapoly0065s0090 Marchantia polymorpha HOM05D006169 ORTHO05D007698 3.4e-62 242.7 187 61.0
Cre12.g508350 Chlamydomonas reinhardtii HOM05D006169 ORTHO05D007698 2.6e-54 216.5 180 56.7
CBR_g8203 Chara braunii HOM05D006169 ORTHO05D007698 3.4e-54 216.1 205 52.2
Nitab4.5_0000005g0540 Nicotiana tabacum HOM05D006169 ORTHO05D007698 9.9e-54 214.5 133 78.2
FAN05G4461 Fragaria x ananassa HOM05D006169 ORTHO05D007698 8.3e-53 211.5 165 63.6
VMungo0720G2022 Vigna mungo HOM05D006169 ORTHO05D007698 2.4e-52 209.9 204 55.4
AagrBONN_evm.TU.Sc2ySwM_344.2014 Anthoceros agrestis HOM05D006169 ORTHO05D007698 6.0e-51 205.3 167 61.7
SMO358G0244 Selaginella moellendorffii HOM05D006169 ORTHO05D007698 3.9e-50 202.6 179 52.0
TAR365G0132 Trochodendron aralioides HOM05D002548 ORTHO05D003031 1.9e-49 200.3 269 45.4
Glyma.20G237950 Glycine max HOM05D006169 ORTHO05D007698 2.1e-48 196.8 120 76.7
MCO01G635 Micromonas commoda HOM05D006169 ORTHO05D007698 7.6e-38 161.8 182 45.6
arahy.Tifrunner.gnm1.ann1.91HID7 Arachis hypogaea HOM05D006169 ORTHO05D007698 1.4e-36 157.5 81 90.1
arahy.Tifrunner.gnm1.ann1.Z5NCG3 Arachis hypogaea HOM05D006169 ORTHO05D007698 1.6e-35 154.1 81 88.9
PGSC0003DMG400043741 Solanum tuberosum HOM05D006169 ORTHO05D007698 2.5e-33 146.7 190 45.3
arahy.Tifrunner.gnm1.ann1.W0CMT4 Arachis hypogaea HOM05D006169 ORTHO05D007698 4.3e-33 146.0 76 89.5
RcHm_v2.0_Chr1g0332671 Rosa chinensis HOM05D006169 ORTHO05D007698 1.6e-27 127.5 69 84.1
PRCOL_00000586 Prasinoderma coloniale HOM05D006169 ORTHO05D007698 3.0e-26 123.2 180 40.0
SMO117G0309 Selaginella moellendorffii HOM05D006169 ORTHO05D007698 6.7e-26 122.1 116 45.7
CSS0014495 Camellia sinensis var. sinensis HOM05D006169 ORTHO05D007698 8.1e-24 115.2 109 59.6
arahy.Tifrunner.gnm1.ann1.CWA5R2 Arachis hypogaea HOM05D006169 ORTHO05D007698 2.0e-22 110.5 58 86.2
Sabra13G0011100 Salix brachista HOM05D006169 ORTHO05D007698 2.2e-21 107.1 156 41.7
MSTRG.5122 Avicennia marina HOM05D006169 ORTHO05D007698 1.2e-19 101.3 72 65.3
arahy.Tifrunner.gnm1.ann1.C5NY6B Arachis hypogaea HOM05D006169 ORTHO05D007698 3.1e-15 86.7 64 65.6
arahy.Tifrunner.gnm1.ann1.4I5A07 Arachis hypogaea HOM05D000158 ORTHO05D003614 5.3e-15 85.9 45 84.4
CSS0040457 Camellia sinensis var. sinensis HOM05D006169 ORTHO05D007698 9.0e-15 85.1 51 76.5
arahy.Tifrunner.gnm1.ann1.GNZ56J Arachis hypogaea HOM05D006169 ORTHO05D007698 6.5e-13 79.0 44 79.5
Os01g0343500 Oryza sativa ssp. japonica HOM05D006169 ORTHO05D007698 6.7e-10 68.9 68 52.9


User provided reference genes

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