Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO210G0747 Papaver somniferum HOM05D002925 ORTHO05D003247 2.8e-51 204.9 99 100.0
PSO829G0001 Papaver somniferum HOM05D002925 ORTHO05D003247 7.7e-49 196.8 97 97.9
PSO447G0391 Papaver somniferum HOM05D002925 ORTHO05D003247 2.2e-48 195.3 97 96.9
TAR625G1540 Trochodendron aralioides HOM05D002925 ORTHO05D003247 2.0e-17 92.4 112 41.1
MBI02_g35745_MAGBIO Magnolia biondii HOM05D002925 ORTHO05D003247 7.3e-15 84.0 112 38.4
TAR076G0002 Trochodendron aralioides HOM05D002925 ORTHO05D003247 1.6e-14 82.8 114 38.6
MBI02_g36599_MAGBIO Magnolia biondii HOM05D002925 ORTHO05D003247 2.8e-14 82.0 114 37.7
Atru.chr6.1160 Acer truncatum HOM05D002925 ORTHO05D003247 3.6e-14 81.6 114 38.6
Haze_10615 Corylus avellana HOM05D002925 ORTHO05D003247 6.2e-14 80.9 114 38.6
MBI02_g05741_MAGBIO Magnolia biondii HOM05D002925 ORTHO05D003247 6.2e-14 80.9 114 37.7
Cfa005642 Carpinus fangiana HOM05D002925 ORTHO05D003247 1.8e-13 79.3 114 38.6
Nn1g05384 Nelumbo nucifera HOM05D002925 ORTHO05D003247 1.8e-13 79.3 114 38.6
QL11p021491 Quercus lobata HOM05D002925 ORTHO05D003247 1.8e-13 79.3 112 37.5
CSS0037093 Camellia sinensis var. sinensis HOM05D002925 ORTHO05D003247 2.3e-13 79.0 114 38.6
CiPaw.06G154400 Carya illinoinensis HOM05D002925 ORTHO05D003247 2.3e-13 79.0 114 37.7
Cpa.g.sc42.38 Carica papaya HOM05D002925 ORTHO05D003247 3.1e-13 78.6 111 40.5
SalBow5G0297 Salvia bowleyana HOM05D002925 ORTHO05D003247 3.1e-13 78.6 114 38.6
SalBow5G2582 Salvia bowleyana HOM05D002925 ORTHO05D003247 3.1e-13 78.6 114 38.6
Nitab4.5_0000863g0180 Nicotiana tabacum HOM05D002925 ORTHO05D003247 4.0e-13 78.2 113 35.4
Dinv24181 Davidia involucrata HOM05D002925 ORTHO05D003247 5.2e-13 77.8 114 41.2
Nitab4.5_0001619g0030 Nicotiana tabacum HOM05D002925 ORTHO05D003247 5.2e-13 77.8 113 34.5
Aqoxy6G00762 Aquilegia oxysepala HOM05D002925 ORTHO05D003247 8.9e-13 77.0 111 36.9
Peaxi162Scf00001g00002 Petunia axillaris HOM05D002925 ORTHO05D003247 1.2e-12 76.6 113 37.2
vmacro01830 Vaccinium macrocarpon HOM05D002925 ORTHO05D003247 1.5e-12 76.3 111 41.4
Oeu036916.1 Olea europaea HOM05D002925 ORTHO05D003247 2.0e-12 75.9 115 39.1
CDE10G0644 Ceratophyllum demersum HOM05D002925 ORTHO05D003247 3.4e-12 75.1 114 35.1
MSTRG.20293 Avicennia marina HOM05D002925 ORTHO05D003247 4.4e-12 74.7 114 39.5
Solyc01g105330.3 Solanum lycopersicum HOM05D002925 ORTHO05D003247 5.8e-12 74.3 113 35.4
Sopen01g047830 Solanum pennellii HOM05D002925 ORTHO05D003247 5.8e-12 74.3 113 35.4
CDE10G0684 Ceratophyllum demersum HOM05D002925 ORTHO05D003247 1.3e-11 73.2 114 33.3
PGSC0003DMG400012552 Solanum tuberosum HOM05D002925 ORTHO05D003247 1.3e-11 73.2 113 35.4
Actinidia24000 Actinidia chinensis HOM05D002925 ORTHO05D003247 2.2e-11 72.4 114 36.0
Ca_00141_v3 Cicer arietinum L. HOM05D002925 ORTHO05D003247 2.2e-11 72.4 101 37.6
Hma1.2p1_0522F.1_g171730 Hydrangea macrophylla HOM05D002925 ORTHO05D003247 2.2e-11 72.4 100 40.0
unitig_22.g6065 Utricularia gibba HOM05D002925 ORTHO05D003247 2.9e-11 72.0 106 38.7
SGA_v2.0_scaffold83G26306 Striga asiatica HOM05D002925 ORTHO05D003247 4.9e-11 71.2 114 35.1
SGA_v2.0_scaffold14G07129 Striga asiatica HOM05D002925 ORTHO05D003247 8.3e-11 70.5 114 33.3
COL.COLO4_29615 Corchorus olitorius HOM05D002925 ORTHO05D003247 1.1e-10 70.1 112 35.7
Manes.07G032600 Manihot esculenta HOM05D002925 ORTHO05D003247 1.4e-10 69.7 113 35.4
TWI59G1115 Tripterygium wilfordii HOM05D002925 ORTHO05D003247 1.9e-10 69.3 117 37.6
TPR.G25224 Trifolium pratense HOM05D002925 ORTHO05D003247 2.4e-10 68.9 92 40.2
Glyma.08G178400 Glycine max HOM05D002925 ORTHO05D003247 3.2e-10 68.6 113 34.5
Actinidia00275 Actinidia chinensis HOM05D002925 ORTHO05D003247 4.1e-10 68.2 114 35.1
Ciclev10027826m.g Citrus clementina HOM05D002925 ORTHO05D003247 4.1e-10 68.2 113 36.3
Potri.001G312900 Populus trichocarpa HOM05D002925 ORTHO05D003247 4.1e-10 68.2 108 40.7
Prupe.8G062800 Prunus persica HOM05D002925 ORTHO05D003247 4.1e-10 68.2 104 40.4
ATR0782G041 Amborella trichopoda HOM05D002925 ORTHO05D003247 5.4e-10 67.8 76 42.1
Migut.B00599 Erythranthe guttata HOM05D002925 ORTHO05D003247 7.1e-10 67.4 109 36.7
Medtr2g009040 Medicago truncatula HOM05D002925 ORTHO05D003247 7.1e-10 67.4 101 36.6
Rhsim11G0137200 Rhododendron simsii HOM05D002925 ORTHO05D003247 7.1e-10 67.4 108 38.9
Cc02_g21380 Coffea canephora HOM05D002925 ORTHO05D003247 9.2e-10 67.0 112 39.3
MD05G1043400 Malus domestica HOM05D002925 ORTHO05D003247 9.2e-10 67.0 104 37.5
Gohir.D02G198200 Gossypium hirsutum HOM05D002925 ORTHO05D003247 2.1e-09 65.9 110 36.4
Gorai.005G221500 Gossypium raimondii HOM05D002925 ORTHO05D003247 2.7e-09 65.5 110 35.5
Lalb_Chr18g0060531 Lupinus albus HOM05D002925 ORTHO05D003247 2.7e-09 65.5 112 33.9
Gohir.A03G174900 Gossypium hirsutum HOM05D002925 ORTHO05D003247 3.5e-09 65.1 111 35.1
Phvul.006G205800 Phaseolus vulgaris HOM05D002925 ORTHO05D003247 4.6e-09 64.7 114 32.5
TPR.G14997 Trifolium pratense HOM05D002925 ORTHO05D003247 4.6e-09 64.7 92 39.1
Thecc.02G136300 Theobroma cacao HOM05D002925 ORTHO05D003247 6.0e-09 64.3 113 35.4
VMungo0540G1175 Vigna mungo HOM05D002925 ORTHO05D003247 1.7e-08 62.8 99 37.4
Eucgr.I02657 Eucalyptus grandis HOM05D002925 ORTHO05D003247 3.9e-08 61.6 109 33.0
arahy.Tifrunner.gnm1.ann1.M5A3LZ Arachis hypogaea HOM05D002925 ORTHO05D003247 1.5e-07 59.7 43 60.5
AUR62013144 Chenopodium quinoa HOM05D002925 ORTHO05D003247 1.5e-07 59.7 50 54.0
Lalb_Chr15g0090391 Lupinus albus HOM05D002925 ORTHO05D003247 2.5e-07 58.9 113 32.7
arahy.Tifrunner.gnm1.ann1.VGLF4N Arachis hypogaea HOM05D002925 ORTHO05D003247 3.3e-07 58.5 98 36.7
CSS0008363 Camellia sinensis var. sinensis HOM05D002925 ORTHO05D003247 3.3e-07 58.5 100 35.0
AUR62010148 Chenopodium quinoa HOM05D002925 ORTHO05D003247 4.3e-07 58.2 115 33.0
RcHm_v2.0_Chr6g0271621 Rosa chinensis HOM05D002925 ORTHO05D003247 5.6e-07 57.8 111 31.5
RcHm_v2.0_Chr6g0271781 Rosa chinensis HOM05D002925 ORTHO05D003247 7.3e-07 57.4 83 37.3
RcHm_v2.0_Chr6g0271751 Rosa chinensis HOM05D002925 ORTHO05D003247 9.5e-07 57.0 111 31.5
Ciclev10000205m.g Citrus clementina HOM05D002925 ORTHO05D003247 1.2e-06 56.6 114 32.5
HPP92_011216 Vanilla planifolia HOM05D002925 ORTHO05D003247 1.6e-06 56.2 112 31.2
EL10Ac1g01207 Beta vulgaris HOM05D002925 ORTHO05D003247 3.6e-06 55.1 111 30.6
AUR62018927 Chenopodium quinoa HOM05D002925 ORTHO05D003247 3.6e-06 55.1 108 32.4
QL12p036977 Quercus lobata HOM05D002925 ORTHO05D003247 4.7e-06 54.7 50 46.0
FvH4_2g11920 Fragaria vesca HOM05D002925 ORTHO05D003247 6.2e-06 54.3 103 32.0
Ah.01g022240 Amaranthus hybridus HOM05D002925 ORTHO05D003247 8.1e-06 53.9 111 27.9
Thecc.08G105500 Theobroma cacao HOM05D002925 ORTHO05D003247 8.1e-06 53.9 112 32.1


User provided reference genes

Program Settings