Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO210G0739 Papaver somniferum HOM05D011196 ORTHO05D012447 2.5e-214 748.4 367 100.0
PSO832G2290 Papaver somniferum HOM05D011196 ORTHO05D012447 5.7e-182 641.0 402 82.1
PSO210G5076 Papaver somniferum HOM05D011196 ORTHO05D012447 1.7e-149 533.1 291 86.6
PSO541G0054 Papaver somniferum HOM05D011196 ORTHO05D012447 1.6e-51 207.6 418 35.2
PSO541G1894 Papaver somniferum HOM05D011196 ORTHO05D012447 1.1e-50 204.9 415 34.9
PSO541G6270 Papaver somniferum HOM05D011196 ORTHO05D012447 6.8e-42 175.6 430 32.3
PSO675G0254 Papaver somniferum HOM05D011196 ORTHO05D012447 1.4e-34 151.4 313 35.1
PSO541G2696 Papaver somniferum HOM05D011196 ORTHO05D012447 4.0e-34 149.8 297 34.3
PSO384G4448 Papaver somniferum HOM05D011196 ORTHO05D012447 7.3e-28 129.0 418 28.5
PSO675G5324 Papaver somniferum HOM05D011196 ORTHO05D012447 1.5e-25 121.3 465 26.9
PSO541G6476 Papaver somniferum HOM05D011196 ORTHO05D012447 9.9e-25 118.6 259 32.8
PSO675G4553 Papaver somniferum HOM05D011196 ORTHO05D012447 3.8e-24 116.7 243 36.6
PSO541G4448 Papaver somniferum HOM05D011196 ORTHO05D012447 1.4e-23 114.8 246 35.8
PSO675G0999 Papaver somniferum HOM05D011196 ORTHO05D012447 5.1e-21 106.3 331 29.3
PSO210G6763 Papaver somniferum HOM05D011196 ORTHO05D012447 2.5e-20 104.0 267 31.1
Aqoxy1G01312 Aquilegia oxysepala HOM05D011196 ORTHO05D012447 3.6e-19 100.1 307 29.3
PSO170G4172 Papaver somniferum HOM05D000004 ORTHO05D012447 7.1e-15 85.9 322 25.5
PSO210G0064 Papaver somniferum HOM05D011196 ORTHO05D012447 1.5e-12 78.2 204 32.8
Eucgr.F02895 Eucalyptus grandis HOM05D007726 ORTHO05D008819 5.6e-12 76.3 374 24.6
QL02p023649 Quercus lobata HOM05D007726 ORTHO05D008819 9.6e-12 75.5 281 28.1
TAR381G1565 Trochodendron aralioides HOM05D007726 ORTHO05D008819 1.8e-10 71.2 196 31.1
Haze_23197 Corylus avellana HOM05D000007 ORTHO05D003666 9.0e-10 68.9 303 24.4
QL08p033970 Quercus lobata HOM05D000007 ORTHO05D003666 9.0e-10 68.9 302 26.2
Oeu030025.1 Olea europaea HOM05D000007 ORTHO05D000521 2.0e-09 67.8 203 28.1
PSO541G0027 Papaver somniferum HOM05D011196 ORTHO05D012447 2.0e-09 67.8 163 29.4
HanXRQChr13g0419561 Helianthus annuus HOM05D000007 ORTHO05D003666 5.8e-09 66.2 163 32.5
CiPaw.13G152900 Carya illinoinensis HOM05D000007 ORTHO05D003666 7.6e-09 65.9 347 23.1
Ciclev10020371m.g Citrus clementina HOM05D007726 ORTHO05D008819 1.3e-08 65.1 216 31.5
TWI14G0263 Tripterygium wilfordii HOM05D007726 ORTHO05D008819 1.7e-08 64.7 286 26.2
Rhsim13G0155300 Rhododendron simsii HOM05D007895 ORTHO05D013379 2.2e-08 64.3 164 24.4
Aqoxy3G01256 Aquilegia oxysepala HOM05D000007 ORTHO05D000521 3.8e-08 63.5 153 30.7
Thhalv10000505m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 4.9e-08 63.2 168 29.2
PSO832G3846 Papaver somniferum HOM05D004049 ORTHO05D004496 4.9e-08 63.2 343 23.9
AL1G54580 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 6.4e-08 62.8 330 25.2
PGSC0003DMG400024288 Solanum tuberosum HOM05D007726 ORTHO05D008819 6.4e-08 62.8 300 24.3
ECA240G0616 Erigeron canadensis HOM05D008254 ORTHO05D010423 1.1e-07 62.0 162 29.0
AL2G17240 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 1.9e-07 61.2 161 26.7
A08p25530 Brassica napus HOM05D000171 ORTHO05D000101 2.4e-07 60.8 188 28.7
Ciclev10020327m.g Citrus clementina HOM05D007726 ORTHO05D008819 2.4e-07 60.8 214 30.4
RcHm_v2.0_Chr6g0253541 Rosa chinensis HOM05D003981 ORTHO05D003666 3.2e-07 60.5 173 25.4
Sopen09g028490 Solanum pennellii HOM05D007726 ORTHO05D008819 3.2e-07 60.5 315 23.8
BraA08t34506Z Brassica rapa HOM05D000171 ORTHO05D000101 4.2e-07 60.1 188 28.7
Cfa009862 Carpinus fangiana HOM05D003981 ORTHO05D003666 4.2e-07 60.1 167 29.3
RcHm_v2.0_Chr3g0480281 Rosa chinensis HOM05D003981 ORTHO05D003666 5.5e-07 59.7 195 27.2
Dinv16551 Davidia involucrata HOM05D000171 ORTHO05D000101 7.1e-07 59.3 296 23.3
FAN07G2491 Fragaria x ananassa HOM05D000007 ORTHO05D009073 7.1e-07 59.3 306 25.2
Manes.18G107700 Manihot esculenta HOM05D007726 ORTHO05D008819 7.1e-07 59.3 191 29.3
BcaB03g12738 Brassica carinata HOM05D000171 ORTHO05D000101 9.3e-07 58.9 161 33.5
MD17G1227400 Malus domestica HOM05D000007 ORTHO05D000039 9.3e-07 58.9 217 27.2
Solyc09g072680.2 Solanum lycopersicum HOM05D007726 ORTHO05D008819 9.3e-07 58.9 318 24.2
BraA05t21831Z Brassica rapa HOM05D000171 ORTHO05D000101 1.2e-06 58.5 166 32.5
BraA07t29956Z Brassica rapa HOM05D000171 ORTHO05D000101 1.2e-06 58.5 303 22.8
Dinv27412 Davidia involucrata HOM05D006650 ORTHO05D008401 1.6e-06 58.2 414 21.3
Lj6g0019357 Lotus japonicus HOM05D000007 ORTHO05D000017 1.6e-06 58.2 289 24.2
Oeu030012.1 Olea europaea HOM05D000007 ORTHO05D000521 2.1e-06 57.8 205 27.3
PSO384G0615 Papaver somniferum HOM05D000007 ORTHO05D000676 2.7e-06 57.4 164 26.8
PSO384G1517 Papaver somniferum HOM05D000007 ORTHO05D000676 2.7e-06 57.4 164 26.8
Ciclev10028697m.g Citrus clementina HOM05D000007 ORTHO05D000017 3.5e-06 57.0 315 24.1
QL04p036457 Quercus lobata HOM05D000007 ORTHO05D000039 3.5e-06 57.0 292 20.5
QL04p065217 Quercus lobata HOM05D000007 ORTHO05D000017 3.5e-06 57.0 170 27.1
Glyma.13G211000 Glycine max HOM05D000007 ORTHO05D000017 4.6e-06 56.6 315 24.4
PSO832G0333 Papaver somniferum HOM05D000007 ORTHO05D000017 4.6e-06 56.6 205 27.3
SalBow1G8574 Salvia bowleyana HOM05D000007 ORTHO05D000017 4.6e-06 56.6 272 24.6
CARHR040900 Cardamine hirsuta HOM05D000171 ORTHO05D000101 6.0e-06 56.2 314 22.9
QL05p078700 Quercus lobata HOM05D000007 ORTHO05D000017 6.0e-06 56.2 106 30.2
Haze_25176 Corylus avellana HOM05D000007 ORTHO05D003666 7.9e-06 55.8 310 24.2
FAN09G3678 Fragaria x ananassa HOM05D000007 ORTHO05D000017 7.9e-06 55.8 297 23.9
TAR375G0745 Trochodendron aralioides HOM05D000007 ORTHO05D007252 7.9e-06 55.8 272 24.3


User provided reference genes

Program Settings