Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO210G0659 Papaver somniferum HOM05D004964 ORTHO05D005918 1.8e-205 719.2 388 100.0
PSO210G1919 Papaver somniferum HOM05D004964 ORTHO05D005918 4.5e-201 704.5 387 96.9
TAR362G0358 Trochodendron aralioides HOM05D004964 ORTHO05D005918 1.1e-106 391.0 387 54.5
Nn4g26424 Nelumbo nucifera HOM05D004964 ORTHO05D005918 5.1e-104 382.1 378 54.0
Manes.08G139500 Manihot esculenta HOM05D004964 ORTHO05D005918 4.2e-98 362.5 380 52.6
Aqoxy4G00649 Aquilegia oxysepala HOM05D004964 ORTHO05D005918 1.6e-97 360.5 384 51.8
Aqoxy5G02134 Aquilegia oxysepala HOM05D004964 ORTHO05D005918 1.3e-96 357.5 384 51.6
MD04G1230400 Malus domestica HOM05D004964 ORTHO05D005918 8.7e-96 354.8 374 50.8
MBI07_g16903_MAGBIO Magnolia biondii HOM05D004964 ORTHO05D005918 2.5e-95 353.2 391 49.6
GSVIVG01023502001 Vitis vinifera HOM05D004964 ORTHO05D005918 6.2e-94 348.6 378 52.1
CSS0014360 Camellia sinensis var. sinensis HOM05D004964 ORTHO05D005918 8.1e-94 348.2 386 50.5
FvH4_6g01921 Fragaria vesca HOM05D004964 ORTHO05D005918 5.8e-92 342.0 376 50.5
Rhsim09G0136900 Rhododendron simsii HOM05D004964 ORTHO05D005918 1.3e-91 340.9 387 47.8
Lj2A43G39 Lonicera japonica HOM05D004964 ORTHO05D005918 2.2e-91 340.1 383 49.1
CAN.G588.60 Capsicum annuum HOM05D004964 ORTHO05D005918 8.4e-91 338.2 367 50.4
FAN14G2205 Fragaria x ananassa HOM05D004964 ORTHO05D005918 1.1e-90 337.8 376 50.0
Cfa006356 Carpinus fangiana HOM05D004964 ORTHO05D005918 1.4e-90 337.4 377 49.6
Solyc01g111410.3 Solanum lycopersicum HOM05D004964 ORTHO05D005918 5.4e-90 335.5 373 49.6
Sopen01g053470 Solanum pennellii HOM05D004964 ORTHO05D005918 5.4e-90 335.5 373 49.3
PGSC0003DMG401006195 Solanum tuberosum HOM05D004964 ORTHO05D005918 4.6e-89 332.4 373 49.1
FAN02G1272 Fragaria x ananassa HOM05D004964 ORTHO05D005918 7.9e-89 331.6 372 49.2
QL03p029942 Quercus lobata HOM05D004964 ORTHO05D005918 1.8e-88 330.5 368 49.5
RcHm_v2.0_Chr3g0449661 Rosa chinensis HOM05D004964 ORTHO05D005918 1.8e-88 330.5 390 47.9
VMungo0331G1958 Vigna mungo HOM05D004964 ORTHO05D005918 4.3e-87 325.9 380 48.4
Thecc.05G270700 Theobroma cacao HOM05D004964 ORTHO05D005918 6.2e-86 322.0 373 49.6
Prupe.6G350300 Prunus persica HOM05D004964 ORTHO05D005918 1.1e-85 321.2 359 49.0
QL03p029974 Quercus lobata HOM05D004964 ORTHO05D005918 1.1e-85 321.2 368 49.5
Peaxi162Scf00407g00626 Petunia axillaris HOM05D004964 ORTHO05D005918 1.4e-85 320.9 352 50.9
AL1G20790 Arabidopsis lyrata HOM05D004964 ORTHO05D005918 9.0e-85 318.2 374 47.1
A06p47210 Brassica napus HOM05D004964 ORTHO05D005918 5.8e-84 315.5 371 48.0
AT1G10095 Arabidopsis thaliana HOM05D004964 ORTHO05D005918 1.3e-83 314.3 372 46.5
BraA06t27592Z Brassica rapa HOM05D004964 ORTHO05D005918 1.7e-83 313.9 371 47.7
Lalb_Chr03g0040321 Lupinus albus HOM05D004964 ORTHO05D005918 2.9e-83 313.2 383 45.2
BcaC06g34559 Brassica carinata HOM05D004964 ORTHO05D005918 1.4e-82 310.8 373 47.7
BolC7t43245H Brassica oleracea HOM05D004964 ORTHO05D005918 1.4e-82 310.8 373 47.7
Sed0000191 Sechium edule HOM05D004964 ORTHO05D005918 1.4e-82 310.8 378 46.6
CiPaw.07G072600 Carya illinoinensis HOM05D004964 ORTHO05D005918 1.9e-82 310.5 372 47.3
Sc10g0001190 Simmondsia chinensis HOM05D004964 ORTHO05D005918 3.2e-82 309.7 383 44.9
Duzib106G0302 Durio zibethinus HOM05D004964 ORTHO05D005918 5.5e-82 308.9 389 48.1
C07p27180 Brassica napus HOM05D004964 ORTHO05D005918 9.3e-82 308.1 373 47.5
MELO3C008708.2 Cucumis melo HOM05D004964 ORTHO05D005918 1.6e-81 307.4 391 47.6
Cpa.g.sc162.40 Carica papaya HOM05D004964 ORTHO05D005918 2.7e-81 306.6 358 48.3
Cc02_g08800 Coffea canephora HOM05D004964 ORTHO05D005918 3.5e-81 306.2 382 46.3
HanXRQChr07g0204481 Helianthus annuus HOM05D004964 ORTHO05D005918 1.3e-80 304.3 366 46.2
CARHR010210 Cardamine hirsuta HOM05D004964 ORTHO05D005918 3.9e-80 302.8 374 48.1
Thhalv10000880m.g Eutrema salsugineum HOM05D004964 ORTHO05D005918 3.9e-80 302.8 376 46.5
Gorai.004G249200 Gossypium raimondii HOM05D004964 ORTHO05D005918 3.9e-80 302.8 367 48.5
Carub.0001s0952 Capsella rubella HOM05D004964 ORTHO05D005918 6.7e-80 302.0 373 46.4
Gohir.D08G234400 Gossypium hirsutum HOM05D004964 ORTHO05D005918 8.7e-80 301.6 367 48.5
Glyma.07G113400 Glycine max HOM05D004964 ORTHO05D005918 2.5e-79 300.1 380 45.3
Sabra13G0043100 Salix brachista HOM05D004964 ORTHO05D005918 2.5e-79 300.1 372 45.7
Nitab4.5_0013387g0040 Nicotiana tabacum HOM05D004964 ORTHO05D005918 4.3e-79 299.3 373 46.1
Ca_14064_v3 Cicer arietinum L. HOM05D004964 ORTHO05D005918 5.7e-79 298.9 382 45.3
QL03p030425 Quercus lobata HOM05D004964 ORTHO05D005918 7.4e-79 298.5 351 48.7
Phvul.010G051000 Phaseolus vulgaris HOM05D004964 ORTHO05D005918 1.3e-78 297.7 380 45.3
arahy.Tifrunner.gnm1.ann1.H9CC2T Arachis hypogaea HOM05D004964 ORTHO05D005918 2.1e-78 297.0 384 44.5
CSS0038343 Camellia sinensis var. sinensis HOM05D004964 ORTHO05D005918 2.1e-78 297.0 384 46.1
arahy.Tifrunner.gnm1.ann1.J3Q9FM Arachis hypogaea HOM05D004964 ORTHO05D005918 6.2e-78 295.4 384 44.0
Oeu016533.1 Olea europaea HOM05D004964 ORTHO05D005918 1.2e-76 291.2 379 46.4
Psat4g225120 Pisum sativum HOM05D004964 ORTHO05D005918 1.5e-76 290.8 382 44.2
Dinv18988 Davidia involucrata HOM05D004964 ORTHO05D005918 3.4e-76 289.7 305 52.5
BcaC06g31621 Brassica carinata HOM05D004964 ORTHO05D005918 4.5e-76 289.3 373 45.6
TPR.G33137 Trifolium pratense HOM05D004964 ORTHO05D005918 5.8e-76 288.9 394 44.7
Ciclev10020293m.g Citrus clementina HOM05D004964 ORTHO05D005918 7.6e-76 288.5 374 46.3
FAN05G4025 Fragaria x ananassa HOM05D004964 ORTHO05D005918 1.7e-75 287.3 375 45.3
A09p21080 Brassica napus HOM05D004964 ORTHO05D005918 2.2e-75 287.0 369 45.0
Migut.F00800 Erythranthe guttata HOM05D004964 ORTHO05D005918 2.2e-75 287.0 372 46.0
FAN05G4826 Fragaria x ananassa HOM05D004964 ORTHO05D005918 2.2e-75 287.0 375 45.3
TPR.G17496 Trifolium pratense HOM05D004964 ORTHO05D005918 2.2e-75 287.0 378 44.7
Glyma.03G113500 Glycine max HOM05D004964 ORTHO05D005918 2.9e-75 286.6 379 45.4
Lsat_1_v5_gn_8_24860 Lactuca sativa HOM05D004964 ORTHO05D005918 3.8e-75 286.2 367 45.2
FAN14G5822 Fragaria x ananassa HOM05D004964 ORTHO05D005918 4.9e-75 285.8 376 45.5
Lj3g0015193 Lotus japonicus HOM05D004964 ORTHO05D005918 5.5e-74 282.3 386 43.5
Medtr8g006785 Medicago truncatula HOM05D004964 ORTHO05D005918 3.3e-71 273.1 409 41.3
unitig_46.g18500 Utricularia gibba HOM05D004964 ORTHO05D005918 2.2e-70 270.4 392 41.6
unitig_47.g30763 Utricularia gibba HOM05D004964 ORTHO05D005918 2.2e-70 270.4 392 41.6
EL10Ac2g04577 Beta vulgaris HOM05D004964 ORTHO05D005918 6.3e-70 268.9 381 42.0
Atru.chr2.987 Acer truncatum HOM05D004964 ORTHO05D005918 2.4e-69 266.9 372 43.8
Gohir.A08G217400 Gossypium hirsutum HOM05D004964 ORTHO05D005918 2.4e-69 266.9 367 44.1
SGA_v2.0_scaffold295G47511 Striga asiatica HOM05D004964 ORTHO05D005918 3.1e-69 266.5 380 42.9
CsaV3_2G009770 Cucumis sativus L. HOM05D004964 ORTHO05D005918 5.3e-69 265.8 331 48.0
ATR0736G161 Amborella trichopoda HOM05D004964 ORTHO05D005918 2.0e-68 263.8 383 41.0
Potri.013G047100 Populus trichocarpa HOM05D004964 ORTHO05D005918 2.0e-68 263.8 308 47.1
AL1G47560 Arabidopsis lyrata HOM05D004964 ORTHO05D005918 8.5e-67 258.5 374 42.0
Sp2g09220 Schrenkiella parvula HOM05D004964 ORTHO05D005918 1.9e-66 257.3 327 45.0
vmacro10367 Vaccinium macrocarpon HOM05D004964 ORTHO05D005918 3.2e-66 256.5 459 37.5
BraA09t37709Z Brassica rapa HOM05D004964 ORTHO05D005918 5.5e-66 255.8 369 42.0
ECA233G3630 Erigeron canadensis HOM05D004964 ORTHO05D005918 3.6e-65 253.1 324 44.8
CANSAT01G0497 Cannabis sativa HOM05D004964 ORTHO05D005918 1.0e-64 251.5 317 47.0
DCAR_022832 Daucus carota HOM05D004964 ORTHO05D005918 1.4e-64 251.1 368 41.0
SGA_v2.0_scaffold26G11247 Striga asiatica HOM05D004964 ORTHO05D005918 6.7e-64 248.8 379 40.9
MSTRG.14348 Avicennia marina HOM05D004964 ORTHO05D005918 1.1e-63 248.1 381 43.0
Nitab4.5_0005396g0030 Nicotiana tabacum HOM05D004964 ORTHO05D005918 1.3e-62 244.6 320 44.1
BcaB07g30949 Brassica carinata HOM05D004964 ORTHO05D005918 2.8e-62 243.4 368 41.6
HPP92_003061 Vanilla planifolia HOM05D004964 ORTHO05D005918 2.8e-62 243.4 386 41.2
AUR62008995 Chenopodium quinoa HOM05D004964 ORTHO05D005918 3.1e-61 240.0 383 40.7
FAN09G0282 Fragaria x ananassa HOM05D004964 ORTHO05D005918 1.5e-60 237.7 261 50.6
AUR62023306 Chenopodium quinoa HOM05D004964 ORTHO05D005918 3.4e-60 236.5 382 40.6
Hund13719 Selenicereus undatus HOM05D004964 ORTHO05D005918 2.2e-59 233.8 390 40.0
COL.COLO4_00075 Corchorus olitorius HOM05D004964 ORTHO05D005918 2.9e-59 233.4 314 46.5
Zm00001eb229480 Zea mays HOM05D004964 ORTHO05D005918 5.0e-59 232.6 305 45.2
Eucgr.H04227 Eucalyptus grandis HOM05D004964 ORTHO05D005918 1.4e-58 231.1 379 39.6
Hma1.2p1_1512F.1_g287895 Hydrangea macrophylla HOM05D004964 ORTHO05D005918 5.1e-56 222.6 249 50.2
Aa31LG1G4780 Aethionema arabicum HOM05D004964 ORTHO05D005918 1.9e-50 204.1 282 44.3
SalBow6G5984 Salvia bowleyana HOM05D004964 ORTHO05D005918 9.4e-50 201.8 441 32.0
SGA_v2.0_scaffold177G39428 Striga asiatica HOM05D004964 ORTHO05D005918 4.7e-49 199.5 383 36.6
MD12G1248000 Malus domestica HOM05D004964 ORTHO05D005918 6.1e-49 199.1 248 45.6
AL1G47570 Arabidopsis lyrata HOM05D004964 ORTHO05D005918 2.2e-46 190.7 395 34.2
CARHR222860 Cardamine hirsuta HOM05D004964 ORTHO05D005918 8.2e-46 188.7 171 55.6
AagrBONN_evm.TU.Sc2ySwM_340.245 Anthoceros agrestis HOM05D004964 ORTHO05D005918 3.1e-45 186.8 336 36.3
QL03p030145 Quercus lobata HOM05D004964 ORTHO05D005918 2.5e-42 177.2 157 54.1
Os01g0684800 Oryza sativa ssp. japonica HOM05D004964 ORTHO05D005918 2.7e-41 173.7 233 43.8
Pp3c7_7610 Physcomitrium patens HOM05D004964 ORTHO05D005918 8.0e-41 172.2 322 33.5
Pp3c11_21460 Physcomitrium patens HOM05D004964 ORTHO05D005918 2.6e-39 167.2 412 29.4
Mapoly0082s0051 Marchantia polymorpha HOM05D004964 ORTHO05D005918 9.8e-39 165.2 453 28.7
Ah.10g037790 Amaranthus hybridus HOM05D004964 ORTHO05D005918 2.8e-38 163.7 384 32.6
AL1G20660 Arabidopsis lyrata HOM05D004964 ORTHO05D005918 1.9e-34 151.0 372 32.0
QL03p030368 Quercus lobata HOM05D004964 ORTHO05D005918 2.3e-32 144.1 223 43.0
CDE04G2937 Ceratophyllum demersum HOM05D004964 ORTHO05D005918 5.2e-32 142.9 182 48.9
MD12G1248600 Malus domestica HOM05D004964 ORTHO05D005918 1.7e-30 137.9 147 53.7
ClCG11G010620 Citrullus lanatus HOM05D004964 ORTHO05D005918 2.2e-30 137.5 138 50.0
QL03p030280 Quercus lobata HOM05D004964 ORTHO05D005918 7.0e-29 132.5 208 44.2
C07p27190 Brassica napus HOM05D004964 ORTHO05D005918 1.1e-26 125.2 240 37.1
BolC7t43246H Brassica oleracea HOM05D004964 ORTHO05D005918 1.1e-26 125.2 240 37.1
SGA_v2.0_scaffold26G11248 Striga asiatica HOM05D004964 ORTHO05D005918 2.1e-25 120.9 207 38.2
Haze_04422 Corylus avellana HOM05D004964 ORTHO05D005918 1.0e-24 118.6 184 44.6
CBR_g718 Chara braunii HOM05D004964 ORTHO05D005918 2.6e-23 114.0 330 27.9
BcaC04g21837 Brassica carinata HOM05D004964 ORTHO05D005918 9.8e-23 112.1 248 34.7
SMO146G0189 Selaginella moellendorffii HOM05D004964 ORTHO05D005918 1.4e-21 108.2 351 29.3
TPR.G15846 Trifolium pratense HOM05D004964 ORTHO05D005918 9.2e-21 105.5 184 35.9
SEGI_14565 Sequoiadendron giganteum HOM05D004964 ORTHO05D005918 7.8e-20 102.4 167 38.9
Lsat_1_v5_gn_6_73440 Lactuca sativa HOM05D001771 ORTHO05D001876 1.7e-19 101.3 129 47.3
QL03p030283 Quercus lobata HOM05D004964 ORTHO05D005918 5.6e-18 96.3 108 41.7
BolC9t55571H Brassica oleracea HOM05D004964 ORTHO05D005918 1.0e-16 92.0 136 39.7
Hund12147 Selenicereus undatus HOM05D004964 ORTHO05D005918 2.3e-16 90.9 203 34.0
SHI23132 Sapria himalayana HOM05D000024 ORTHO05D000007 3.1e-16 90.5 110 42.7
Aa31LG1G4790 Aethionema arabicum HOM05D004964 ORTHO05D005918 8.9e-16 89.0 115 40.0
QL03p030376 Quercus lobata HOM05D004964 ORTHO05D005918 1.2e-15 88.6 156 32.1
C09p26820 Brassica napus HOM05D004964 ORTHO05D005918 9.8e-15 85.5 150 39.3
BolC9t55572H Brassica oleracea HOM05D004964 ORTHO05D005918 1.3e-14 85.1 97 46.4
MD12G1248100 Malus domestica HOM05D004964 ORTHO05D005918 1.7e-11 74.7 75 53.3
SEGI_33500 Sequoiadendron giganteum HOM05D004964 ORTHO05D005918 3.9e-11 73.6 107 42.1
Psat7g249360 Pisum sativum HOM05D001947 ORTHO05D021361 1.1e-08 65.5 59 55.9
TPR.G19618 Trifolium pratense HOM05D004964 ORTHO05D005918 1.1e-08 65.5 82 37.8
arahy.Tifrunner.gnm1.ann1.A28SEL Arachis hypogaea HOM05D000231 ORTHO05D005918 2.3e-08 64.3 88 42.0
Lsat_1_v5_gn_6_39820 Lactuca sativa HOM05D004964 ORTHO05D005918 1.2e-07 62.0 69 53.6
CDE04G0768 Ceratophyllum demersum HOM05D004964 ORTHO05D005918 2.0e-07 61.2 82 34.1
Haze_04423 Corylus avellana HOM05D004964 ORTHO05D005918 7.5e-07 59.3 110 30.0


User provided reference genes

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