Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO210G0390 Papaver somniferum HOM05D006309 ORTHO05D007937 3.7e-51 204.5 100 100.0
PSO761G0726 Papaver somniferum HOM05D006309 ORTHO05D007937 3.7e-51 204.5 100 100.0
Nn7g36656 Nelumbo nucifera HOM05D006309 ORTHO05D007937 7.3e-39 163.7 95 81.1
Prupe.6G304700 Prunus persica HOM05D006309 ORTHO05D007937 1.6e-38 162.5 95 78.9
Cpa.g.sc48.50 Carica papaya HOM05D006309 ORTHO05D007937 2.1e-38 162.2 95 78.9
Nitab4.5_0000936g0050 Nicotiana tabacum HOM05D006309 ORTHO05D007937 4.7e-38 161.0 96 79.2
Cc02_g35850 Coffea canephora HOM05D006309 ORTHO05D007937 6.2e-38 160.6 94 80.9
Solyc03g098120.3 Solanum lycopersicum HOM05D006309 ORTHO05D007937 6.2e-38 160.6 96 78.1
Sopen03g028820 Solanum pennellii HOM05D006309 ORTHO05D007937 6.2e-38 160.6 96 78.1
Duzib205G1677 Durio zibethinus HOM05D006309 ORTHO05D007937 1.1e-37 159.8 95 78.9
Peaxi162Scf00171g00731 Petunia axillaris HOM05D006309 ORTHO05D007937 1.1e-37 159.8 96 78.1
Nitab4.5_0004454g0020 Nicotiana tabacum HOM05D006309 ORTHO05D007937 1.4e-37 159.5 96 78.1
Atru.chr12.1543 Acer truncatum HOM05D006309 ORTHO05D007937 1.8e-37 159.1 95 78.9
CAN.G637.25 Capsicum annuum HOM05D006309 ORTHO05D007937 1.8e-37 159.1 96 77.1
PGSC0003DMG400031051 Solanum tuberosum HOM05D006309 ORTHO05D007937 1.8e-37 159.1 96 77.1
MD12G1199900 Malus domestica HOM05D006309 ORTHO05D007937 3.1e-37 158.3 95 76.8
PGR083G2709 Punica granatum HOM05D006309 ORTHO05D007937 3.1e-37 158.3 97 77.3
QL03p010963 Quercus lobata HOM05D006309 ORTHO05D007937 3.1e-37 158.3 95 76.8
Manes.09G181100 Manihot esculenta HOM05D006309 ORTHO05D007937 4.0e-37 157.9 94 78.7
arahy.Tifrunner.gnm1.ann1.RC3JIS Arachis hypogaea HOM05D006309 ORTHO05D007937 5.2e-37 157.5 93 78.5
Psat6g155680 Pisum sativum HOM05D006309 ORTHO05D007937 5.2e-37 157.5 93 78.5
Ca_10200_v3 Cicer arietinum L. HOM05D006309 ORTHO05D007937 6.8e-37 157.1 93 77.4
TAR636G2194 Trochodendron aralioides HOM05D006309 ORTHO05D007937 8.9e-37 156.8 97 73.2
Ah.06g190700 Amaranthus hybridus HOM05D006309 ORTHO05D007937 1.2e-36 156.4 93 77.4
arahy.Tifrunner.gnm1.ann1.P9U7KY Arachis hypogaea HOM05D006309 ORTHO05D007937 1.2e-36 156.4 93 77.4
arahy.Tifrunner.gnm1.ann1.VGN228 Arachis hypogaea HOM05D006309 ORTHO05D007937 1.2e-36 156.4 93 77.4
CANSAT54G2801 Cannabis sativa HOM05D006309 ORTHO05D007937 1.2e-36 156.4 95 75.8
FvH4_6g08490 Fragaria vesca HOM05D006309 ORTHO05D007937 1.2e-36 156.4 95 76.8
FAN02G0285 Fragaria x ananassa HOM05D006309 ORTHO05D007937 1.2e-36 156.4 95 76.8
FAN05G1622 Fragaria x ananassa HOM05D006309 ORTHO05D007937 1.2e-36 156.4 95 76.8
FAN09G1610 Fragaria x ananassa HOM05D006309 ORTHO05D007937 1.2e-36 156.4 95 76.8
FAN14G3239 Fragaria x ananassa HOM05D006309 ORTHO05D007937 1.2e-36 156.4 95 76.8
Lalb_Chr02g0147551 Lupinus albus HOM05D006309 ORTHO05D007937 1.2e-36 156.4 94 75.5
Dinv24513 Davidia involucrata HOM05D006309 ORTHO05D007937 1.5e-36 156.0 94 76.6
RcHm_v2.0_Chr3g0458531 Rosa chinensis HOM05D006309 ORTHO05D007937 1.5e-36 156.0 95 75.8
Oeu061901.1 Olea europaea HOM05D006309 ORTHO05D007937 2.0e-36 155.6 94 76.6
Lalb_Chr21g0310061 Lupinus albus HOM05D006309 ORTHO05D007937 3.4e-36 154.8 94 74.5
CiPaw.04G111200 Carya illinoinensis HOM05D006309 ORTHO05D007937 4.4e-36 154.5 93 77.4
CDE09G0003 Ceratophyllum demersum HOM05D006309 ORTHO05D007937 4.4e-36 154.5 94 73.4
Gohir.A08G153400 Gossypium hirsutum HOM05D006309 ORTHO05D007937 4.4e-36 154.5 94 77.7
VMungo0720G0633 Vigna mungo HOM05D006309 ORTHO05D007937 4.4e-36 154.5 93 76.3
Gohir.D08G174300 Gossypium hirsutum HOM05D006309 ORTHO05D007937 5.8e-36 154.1 94 77.7
Gorai.004G182000 Gossypium raimondii HOM05D006309 ORTHO05D007937 5.8e-36 154.1 94 77.7
Lj5g0003279 Lotus japonicus HOM05D006309 ORTHO05D007937 5.8e-36 154.1 93 77.4
BcaB07g31141 Brassica carinata HOM05D006309 ORTHO05D007937 7.6e-36 153.7 94 74.5
BcaC04g22081 Brassica carinata HOM05D006309 ORTHO05D007937 7.6e-36 153.7 94 74.5
C09p23680 Brassica napus HOM05D006309 ORTHO05D007937 7.6e-36 153.7 94 74.5
BraA09t37510Z Brassica rapa HOM05D006309 ORTHO05D007937 7.6e-36 153.7 94 74.5
Ciclev10013195m.g Citrus clementina HOM05D006309 ORTHO05D007937 7.6e-36 153.7 95 74.7
Glyma.20G090800 Glycine max HOM05D006309 ORTHO05D007937 7.6e-36 153.7 93 76.3
Glyma.20G092200 Glycine max HOM05D006309 ORTHO05D007937 7.6e-36 153.7 93 76.3
SalBow5G3054 Salvia bowleyana HOM05D006309 ORTHO05D007937 7.6e-36 153.7 94 75.5
Sp1g28800 Schrenkiella parvula HOM05D006309 ORTHO05D007937 7.6e-36 153.7 94 74.5
AUR62000475 Chenopodium quinoa HOM05D006309 ORTHO05D007937 9.9e-36 153.3 93 75.3
Sp2g05970 Schrenkiella parvula HOM05D006309 ORTHO05D007937 9.9e-36 153.3 94 74.5
THA.LOC104820476 Tarenaya hassleriana HOM05D006309 ORTHO05D007937 9.9e-36 153.3 93 75.3
Haze_03988 Corylus avellana HOM05D006309 ORTHO05D007937 1.3e-35 152.9 95 73.7
Phvul.007G205000 Phaseolus vulgaris HOM05D006309 ORTHO05D007937 1.3e-35 152.9 93 75.3
Hund05518 Selenicereus undatus HOM05D006309 ORTHO05D007937 1.3e-35 152.9 93 75.3
Actinidia22855 Actinidia chinensis HOM05D006309 ORTHO05D007937 1.7e-35 152.5 93 76.3
Aqoxy2G02488 Aquilegia oxysepala HOM05D006309 ORTHO05D007937 1.7e-35 152.5 95 70.5
A09p18900 Brassica napus HOM05D006309 ORTHO05D007937 1.7e-35 152.5 94 74.5
BolC9t55290H Brassica oleracea HOM05D006309 ORTHO05D007937 1.7e-35 152.5 94 73.4
Carub.0002s0712 Capsella rubella HOM05D006309 ORTHO05D007937 1.7e-35 152.5 93 76.3
ECA233G1704 Erigeron canadensis HOM05D006309 ORTHO05D007937 2.2e-35 152.1 94 75.5
Rhsim11G0105200 Rhododendron simsii HOM05D006309 ORTHO05D007937 2.2e-35 152.1 93 75.3
Thecc.03G310900 Theobroma cacao HOM05D006309 ORTHO05D007937 2.2e-35 152.1 95 74.7
CiPaw.07G036200 Carya illinoinensis HOM05D006309 ORTHO05D007937 2.9e-35 151.8 93 75.3
AUR62017099 Chenopodium quinoa HOM05D006309 ORTHO05D007937 2.9e-35 151.8 93 75.3
Sed0021183 Sechium edule HOM05D006309 ORTHO05D007937 2.9e-35 151.8 94 74.5
Sc16g0009400 Simmondsia chinensis HOM05D006309 ORTHO05D007937 2.9e-35 151.8 94 74.5
AT1G57540 Arabidopsis thaliana HOM05D006309 ORTHO05D007937 3.8e-35 151.4 93 75.3
CARHR288700 Cardamine hirsuta HOM05D006309 ORTHO05D007937 3.8e-35 151.4 93 75.3
Os01g0250600 Oryza sativa ssp. japonica HOM05D006309 ORTHO05D007937 3.8e-35 151.4 96 74.0
Rhsim11G0104500 Rhododendron simsii HOM05D006309 ORTHO05D007937 3.8e-35 151.4 93 74.2
vmacro16416 Vaccinium macrocarpon HOM05D006309 ORTHO05D007937 3.8e-35 151.4 93 74.2
GSVIVG01031328001 Vitis vinifera HOM05D006309 ORTHO05D007937 3.8e-35 151.4 93 76.3
ClCG02G014650 Citrullus lanatus HOM05D006309 ORTHO05D007937 4.9e-35 151.0 94 74.5
Thhalv10010969m.g Eutrema salsugineum HOM05D006309 ORTHO05D007937 4.9e-35 151.0 94 74.5
FvH4_2g19190 Fragaria vesca HOM05D006309 ORTHO05D007937 4.9e-35 151.0 95 74.7
FAN24G3038 Fragaria x ananassa HOM05D006309 ORTHO05D007937 4.9e-35 151.0 95 74.7
Medtr1g484930 Medicago truncatula HOM05D006309 ORTHO05D007937 4.9e-35 151.0 93 73.1
CSS0019637 Camellia sinensis var. sinensis HOM05D006309 ORTHO05D007937 6.4e-35 150.6 93 76.3
CSS0033999 Camellia sinensis var. sinensis HOM05D006309 ORTHO05D007937 6.4e-35 150.6 93 76.3
AL1G67090 Arabidopsis lyrata HOM05D006309 ORTHO05D007937 8.4e-35 150.2 93 74.2
ATR0796G010 Amborella trichopoda HOM05D006309 ORTHO05D007937 1.4e-34 149.4 94 73.4
Aa31LG2G11310 Aethionema arabicum HOM05D006309 ORTHO05D007937 1.9e-34 149.1 94 72.3
Lsat_1_v5_gn_1_112940 Lactuca sativa HOM05D006309 ORTHO05D007937 1.9e-34 149.1 97 71.1
Potri.005G002900 Populus trichocarpa HOM05D006309 ORTHO05D007937 2.4e-34 148.7 94 73.4
MELO3C004152.2 Cucumis melo HOM05D006309 ORTHO05D007937 3.2e-34 148.3 95 72.6
Hma1.2p1_0759F.1_g213920 Hydrangea macrophylla HOM05D006309 ORTHO05D007937 3.2e-34 148.3 93 74.2
Sc09g0002420 Simmondsia chinensis HOM05D006309 ORTHO05D007937 3.2e-34 148.3 94 72.3
TPR.G2591 Trifolium pratense HOM05D006309 ORTHO05D007937 3.2e-34 148.3 93 72.0
unitig_62.g23615 Utricularia gibba HOM05D006309 ORTHO05D007937 3.2e-34 148.3 93 74.2
EL10Ac4g09558 Beta vulgaris HOM05D006309 ORTHO05D007937 9.2e-34 146.7 95 72.6
FAN15G2822 Fragaria x ananassa HOM05D006309 ORTHO05D007937 9.2e-34 146.7 95 72.6
TWI36G0052 Tripterygium wilfordii HOM05D006309 ORTHO05D007937 1.2e-33 146.4 94 71.3
Migut.H01672 Erythranthe guttata HOM05D006309 ORTHO05D007937 2.1e-33 145.6 93 72.0
vmacro01669 Vaccinium macrocarpon HOM05D006309 ORTHO05D007937 2.7e-33 145.2 95 71.6
HanXRQChr08g0212181 Helianthus annuus HOM05D006309 ORTHO05D007937 7.8e-33 143.7 89 73.0
Prupe.8G045300 Prunus persica HOM05D006309 ORTHO05D007937 1.0e-32 143.3 95 70.5
CsaV3_2G007320 Cucumis sativus L. HOM05D006309 ORTHO05D007937 5.1e-32 141.0 93 71.0
arahy.Tifrunner.gnm1.ann1.01IKZ7 Arachis hypogaea HOM05D006309 ORTHO05D007937 6.6e-32 140.6 126 57.9
Lj4g0016187 Lotus japonicus HOM05D006309 ORTHO05D007937 1.9e-31 139.0 93 71.0
SalBow4G0401 Salvia bowleyana HOM05D006309 ORTHO05D007937 7.3e-31 137.1 117 59.8
SalBow4G1963 Salvia bowleyana HOM05D006309 ORTHO05D007937 7.3e-31 137.1 117 59.8
SalBow4G2407 Salvia bowleyana HOM05D006309 ORTHO05D007937 7.3e-31 137.1 117 59.8
DCAR_007528 Daucus carota HOM05D006309 ORTHO05D007937 9.6e-31 136.7 108 63.9
Sabra13G0001700 Salix brachista HOM05D006309 ORTHO05D007937 4.8e-30 134.4 112 59.8
Cfa012394 Carpinus fangiana HOM05D006309 ORTHO05D007937 1.8e-29 132.5 84 71.4
EL10Ac4g07573 Beta vulgaris HOM05D006309 ORTHO05D007937 2.6e-28 128.6 93 68.8
Sabra05G0000300 Salix brachista HOM05D006309 ORTHO05D007937 1.3e-27 126.3 137 49.6
Sabra05G0014400 Salix brachista HOM05D006309 ORTHO05D007937 1.3e-27 126.3 137 49.6
MBI18_g10373_MAGBIO Magnolia biondii HOM05D006309 ORTHO05D007937 2.4e-26 122.1 94 66.0
Dinv30948 Davidia involucrata HOM05D006309 ORTHO05D007937 3.3e-23 111.7 70 72.9
Mapoly0075s0044 Marchantia polymorpha HOM05D006309 ORTHO05D007937 4.9e-19 97.8 94 50.0
Pp3c8_1240 Physcomitrium patens HOM05D006309 ORTHO05D007937 7.1e-18 94.0 93 49.5
HanXRQChr06g0180851 Helianthus annuus HOM05D006309 ORTHO05D007937 6.7e-16 87.4 50 78.0
HanXRQChr16g0506271 Helianthus annuus HOM05D006309 ORTHO05D007937 6.7e-16 87.4 50 78.0
COL.COLO4_16932 Corchorus olitorius HOM05D006309 ORTHO05D007937 1.4e-13 79.7 46 78.3
Glyma.09G093300 Glycine max HOM05D006309 ORTHO05D000504 9.0e-13 77.0 59 59.3
MBI06_g06498_MAGBIO Magnolia biondii HOM05D006309 ORTHO05D007937 1.5e-12 76.3 48 72.9
Zm00001eb239560 Zea mays HOM05D006309 ORTHO05D007937 2.0e-12 75.9 50 66.0
DCAR_029292 Daucus carota HOM05D002465 ORTHO05D005308 4.9e-11 71.2 49 65.3
BNapus_Darmor_BZH_scaffold_223p00020 Brassica napus HOM05D006309 ORTHO05D007937 5.1e-08 61.2 39 69.2
TAR627G1128 Trochodendron aralioides HOM05D006309 ORTHO05D007937 9.6e-07 57.0 41 65.9


User provided reference genes

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