Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO210G0346 Papaver somniferum HOM05D005630 ORTHO05D006979 1.6e-71 272.7 145 100.0
PSO210G6044 Papaver somniferum HOM05D005630 ORTHO05D006979 3.6e-71 271.6 145 99.3
Cfa020874 Carpinus fangiana HOM05D005630 ORTHO05D006979 3.1e-46 188.7 131 71.8
Nn8g40117 Nelumbo nucifera HOM05D005630 ORTHO05D006979 1.7e-44 183.0 128 71.9
TAR383G0582 Trochodendron aralioides HOM05D005630 ORTHO05D006979 2.2e-44 182.6 114 77.2
Haze_19305 Corylus avellana HOM05D005630 ORTHO05D006979 3.2e-43 178.7 131 69.5
Manes.03G015700 Manihot esculenta HOM05D005630 ORTHO05D006979 3.2e-43 178.7 104 78.8
THA.LOC104826572 Tarenaya hassleriana HOM05D005630 ORTHO05D006979 4.2e-43 178.3 108 78.7
COL.COLO4_35448 Corchorus olitorius HOM05D000321 ORTHO05D000204 5.4e-43 177.9 104 78.8
CANSAT11G0524 Cannabis sativa HOM05D005630 ORTHO05D006979 9.3e-43 177.2 104 79.8
Duzib128G0941 Durio zibethinus HOM05D005630 ORTHO05D006979 9.3e-43 177.2 104 79.8
Prupe.7G253200 Prunus persica HOM05D005630 ORTHO05D006979 9.3e-43 177.2 104 79.8
CiPaw.04G061600 Carya illinoinensis HOM05D005630 ORTHO05D006979 1.2e-42 176.8 104 77.9
Potri.018G113200 Populus trichocarpa HOM05D005630 ORTHO05D006979 1.2e-42 176.8 132 66.7
QL02p091555 Quercus lobata HOM05D005630 ORTHO05D006979 1.2e-42 176.8 104 78.8
Actinidia03956 Actinidia chinensis HOM05D005630 ORTHO05D006979 1.6e-42 176.4 113 73.5
Prupe.3G048400 Prunus persica HOM05D005630 ORTHO05D006979 1.6e-42 176.4 104 79.8
Gohir.A05G280400 Gossypium hirsutum HOM05D005630 ORTHO05D006979 3.5e-42 175.3 104 79.8
Gohir.D05G282200 Gossypium hirsutum HOM05D005630 ORTHO05D006979 3.5e-42 175.3 104 79.8
Gorai.009G295600 Gossypium raimondii HOM05D005630 ORTHO05D006979 3.5e-42 175.3 104 79.8
BraA05t21929Z Brassica rapa HOM05D005630 ORTHO05D006979 4.6e-42 174.9 129 67.4
CSS0013521 Camellia sinensis var. sinensis HOM05D005630 ORTHO05D006979 4.6e-42 174.9 114 74.6
PGR142G4039 Punica granatum HOM05D005630 ORTHO05D006979 4.6e-42 174.9 104 76.9
TWI34G2008 Tripterygium wilfordii HOM05D005630 ORTHO05D006979 4.6e-42 174.9 104 77.9
ClCG10G005100 Citrullus lanatus HOM05D005630 ORTHO05D006979 6.0e-42 174.5 104 76.9
BcaB06g25926 Brassica carinata HOM05D005630 ORTHO05D006979 7.8e-42 174.1 131 67.9
BolC3t17269H Brassica oleracea HOM05D005630 ORTHO05D006979 7.8e-42 174.1 129 66.7
Atru.chr7.200 Acer truncatum HOM05D005630 ORTHO05D006979 1.0e-41 173.7 104 76.9
BcaC05g28577 Brassica carinata HOM05D005630 ORTHO05D006979 1.0e-41 173.7 129 66.7
C05p46800 Brassica napus HOM05D005630 ORTHO05D006979 1.0e-41 173.7 129 66.7
BolC5t33410H Brassica oleracea HOM05D005630 ORTHO05D006979 1.0e-41 173.7 129 66.7
Ciclev10009802m.g Citrus clementina HOM05D005630 ORTHO05D006979 1.0e-41 173.7 107 77.6
RcHm_v2.0_Chr2g0086501 Rosa chinensis HOM05D005630 ORTHO05D006979 1.0e-41 173.7 104 77.9
THA.LOC104815401 Tarenaya hassleriana HOM05D005630 ORTHO05D006979 1.0e-41 173.7 102 80.4
A05p30870 Brassica napus HOM05D005630 ORTHO05D006979 1.3e-41 173.3 129 66.7
FvH4_1g01540 Fragaria vesca HOM05D005630 ORTHO05D006979 1.3e-41 173.3 104 77.9
FAN28G1107 Fragaria x ananassa HOM05D005630 ORTHO05D006979 1.3e-41 173.3 104 77.9
Sed0022514 Sechium edule HOM05D005630 ORTHO05D006979 1.3e-41 173.3 104 76.9
ECA234G3390 Erigeron canadensis HOM05D000399 ORTHO05D000304 1.7e-41 172.9 115 72.2
Migut.J01281 Erythranthe guttata HOM05D005630 ORTHO05D006979 1.7e-41 172.9 129 67.4
Thhalv10021733m.g Eutrema salsugineum HOM05D005630 ORTHO05D006979 1.7e-41 172.9 109 73.4
Sc08g0004950 Simmondsia chinensis HOM05D005630 ORTHO05D006979 1.7e-41 172.9 104 76.9
C03p49710 Brassica napus HOM05D005630 ORTHO05D006979 2.3e-41 172.6 129 65.9
CAN.G1505.19 Capsicum annuum HOM05D005630 ORTHO05D006979 2.3e-41 172.6 104 77.9
Sp3g16800 Schrenkiella parvula HOM05D005630 ORTHO05D006979 2.3e-41 172.6 131 67.9
Aa31LG8G5570 Aethionema arabicum HOM05D005630 ORTHO05D006979 3.0e-41 172.2 129 64.3
FAN26G1041 Fragaria x ananassa HOM05D005630 ORTHO05D006979 3.0e-41 172.2 104 76.9
MD02G1012200 Malus domestica HOM05D005630 ORTHO05D006979 3.0e-41 172.2 102 80.4
MSTRG.19630 Avicennia marina HOM05D005630 ORTHO05D006979 3.9e-41 171.8 104 76.0
CARHR094150 Cardamine hirsuta HOM05D005630 ORTHO05D006979 3.9e-41 171.8 102 78.4
AL3G32110 Arabidopsis lyrata HOM05D005630 ORTHO05D006979 5.1e-41 171.4 102 78.4
AT3G18760 Arabidopsis thaliana HOM05D005630 ORTHO05D006979 5.1e-41 171.4 102 78.4
BcaB04g19003 Brassica carinata HOM05D005630 ORTHO05D006979 5.1e-41 171.4 129 65.9
Rhsim03G0057400 Rhododendron simsii HOM05D005630 ORTHO05D006979 5.1e-41 171.4 104 76.9
BraA03t13240Z Brassica rapa HOM05D005630 ORTHO05D006979 6.6e-41 171.0 129 65.1
Carub.0003s1855 Capsella rubella HOM05D005630 ORTHO05D006979 1.5e-40 169.9 102 77.5
Cc06_g16720 Coffea canephora HOM05D005630 ORTHO05D006979 1.5e-40 169.9 130 66.2
MD15G1158000 Malus domestica HOM05D005630 ORTHO05D006979 1.5e-40 169.9 104 79.8
Lj2g0025219 Lotus japonicus HOM05D005630 ORTHO05D006979 2.5e-40 169.1 104 74.0
Hma1.2p1_1164F.1_g262820 Hydrangea macrophylla HOM05D005630 ORTHO05D006979 3.3e-40 168.7 104 76.0
HanXRQChr10g0314501 Helianthus annuus HOM05D005630 ORTHO05D006979 4.3e-40 168.3 104 74.0
Lj3g0020108 Lotus japonicus HOM05D005630 ORTHO05D006979 4.3e-40 168.3 104 74.0
Nitab4.5_0005975g0020 Nicotiana tabacum HOM05D005630 ORTHO05D006979 4.3e-40 168.3 104 75.0
MELO3C014176.2 Cucumis melo HOM05D005630 ORTHO05D006979 5.6e-40 167.9 104 75.0
Lsat_1_v5_gn_5_90640 Lactuca sativa HOM05D005630 ORTHO05D006979 5.6e-40 167.9 102 77.5
Solyc02g084380.3 Solanum lycopersicum HOM05D005630 ORTHO05D006979 5.6e-40 167.9 104 76.0
Nitab4.5_0002880g0080 Nicotiana tabacum HOM05D005630 ORTHO05D006979 7.3e-40 167.5 104 74.0
Sopen02g029090 Solanum pennellii HOM05D005630 ORTHO05D006979 7.3e-40 167.5 104 75.0
GSVIVG01001041001 Vitis vinifera HOM05D005630 ORTHO05D006979 7.3e-40 167.5 98 80.6
Oeu028785.1 Olea europaea HOM05D005630 ORTHO05D006979 9.6e-40 167.2 104 74.0
Peaxi162Scf00083g01117 Petunia axillaris HOM05D005630 ORTHO05D006979 9.6e-40 167.2 104 75.0
Nitab4.5_0000914g0010 Nicotiana tabacum HOM05D005630 ORTHO05D006979 1.3e-39 166.8 104 75.0
PGSC0003DMG400023408 Solanum tuberosum HOM05D005630 ORTHO05D006979 1.3e-39 166.8 104 74.0
vmacro07529 Vaccinium macrocarpon HOM05D005630 ORTHO05D006979 1.3e-39 166.8 97 79.4
Solyc05g054990.3 Solanum lycopersicum HOM05D005630 ORTHO05D006979 1.6e-39 166.4 104 73.1
Sopen05g033450 Solanum pennellii HOM05D005630 ORTHO05D006979 1.6e-39 166.4 104 73.1
EL10Ac4g09637 Beta vulgaris HOM05D005630 ORTHO05D006979 2.1e-39 166.0 127 63.0
SGA_v2.0_scaffold336G49163 Striga asiatica HOM05D005630 ORTHO05D006979 3.6e-39 165.2 97 77.3
CsaV3_3G004770 Cucumis sativus L. HOM05D005630 ORTHO05D006979 4.8e-39 164.9 104 73.1
DCAR_019353 Daucus carota HOM05D000452 ORTHO05D000647 1.4e-38 163.3 104 71.2
SalBow1G1736 Salvia bowleyana HOM05D005630 ORTHO05D006979 3.1e-38 162.2 106 69.8
Eucgr.H01228 Eucalyptus grandis HOM05D005630 ORTHO05D006979 4.0e-38 161.8 104 70.2
unitig_46.g18303 Utricularia gibba HOM05D005630 ORTHO05D006979 4.0e-38 161.8 113 68.1
Nitab4.5_0003965g0050 Nicotiana tabacum HOM05D005630 ORTHO05D006979 9.0e-38 160.6 104 72.1
Eucgr.H01921 Eucalyptus grandis HOM05D005630 ORTHO05D006979 1.2e-37 160.2 104 69.2
Glyma.01G008800 Glycine max HOM05D005630 ORTHO05D006979 1.5e-37 159.8 108 68.5
Lalb_Chr01g0020901 Lupinus albus HOM05D005630 ORTHO05D006979 1.5e-37 159.8 104 73.1
TPR.G31501 Trifolium pratense HOM05D005630 ORTHO05D006979 1.5e-37 159.8 104 71.2
A03p40820 Brassica napus HOM05D005630 ORTHO05D006979 2.0e-37 159.5 129 63.6
Os01g0220300 Oryza sativa ssp. japonica HOM05D005630 ORTHO05D006979 2.0e-37 159.5 104 70.2
unitig_46.g18374 Utricularia gibba HOM05D005736 ORTHO05D007215 2.0e-37 159.5 108 68.5
TPR.G21379 Trifolium pratense HOM05D005630 ORTHO05D006979 2.6e-37 159.1 126 63.5
CAN.G1465.11 Capsicum annuum HOM05D005630 ORTHO05D006979 3.4e-37 158.7 104 71.2
Ca_08945_v3 Cicer arietinum L. HOM05D005630 ORTHO05D006979 3.4e-37 158.7 104 71.2
Psat3g037680 Pisum sativum HOM05D005630 ORTHO05D006979 9.9e-37 157.1 104 69.2
Actinidia37787 Actinidia chinensis HOM05D005630 ORTHO05D006979 1.3e-36 156.8 98 74.5
Medtr7g103190 Medicago truncatula HOM05D005630 ORTHO05D006979 1.3e-36 156.8 108 67.6
Glyma.16G077600 Glycine max HOM05D005630 ORTHO05D006979 1.7e-36 156.4 108 66.7
VMungo0464G1149 Vigna mungo HOM05D005630 ORTHO05D006979 1.7e-36 156.4 108 67.6
arahy.Tifrunner.gnm1.ann1.N9H741 Arachis hypogaea HOM05D005630 ORTHO05D006979 2.9e-36 155.6 102 72.5
MBI07_g35858_MAGBIO Magnolia biondii HOM05D005630 ORTHO05D006979 6.4e-36 154.5 87 85.1
Zm00001eb119770 Zea mays HOM05D005630 ORTHO05D006979 8.4e-36 154.1 130 59.2
Medtr6g088605 Medicago truncatula HOM05D005630 ORTHO05D006979 1.1e-35 153.7 104 68.3
Psat5g026240 Pisum sativum HOM05D005630 ORTHO05D006979 1.9e-35 152.9 99 71.7
HPP92_008634 Vanilla planifolia HOM05D005630 ORTHO05D006979 1.9e-35 152.9 119 62.2
VMungo0464G1592 Vigna mungo HOM05D005630 ORTHO05D006979 4.2e-35 151.8 108 65.7
FAN23G2038 Fragaria x ananassa HOM05D005630 ORTHO05D006979 7.1e-35 151.0 152 52.6
Phvul.004G170400 Phaseolus vulgaris HOM05D005630 ORTHO05D006979 2.1e-34 149.4 104 66.3
Thecc.10G171800 Theobroma cacao HOM05D005630 ORTHO05D006979 8.7e-33 144.1 108 65.7
Ah.01g003710 Amaranthus hybridus HOM05D005630 ORTHO05D006979 1.1e-32 143.7 101 68.3
CDE02G3819 Ceratophyllum demersum HOM05D005630 ORTHO05D006979 6.2e-31 137.9 84 75.0
Dinv41416 Davidia involucrata HOM05D005630 ORTHO05D006979 6.2e-31 137.9 85 75.3
Oeu040774.1 Olea europaea HOM05D005630 ORTHO05D006979 5.3e-30 134.8 147 50.3
FAN19G2317 Fragaria x ananassa HOM05D005630 ORTHO05D006979 3.4e-29 132.1 104 63.5
AagrBONN_evm.TU.Sc2ySwM_117.2919 Anthoceros agrestis HOM05D005630 ORTHO05D006979 9.9e-29 130.6 101 57.4
Pp3c3_21570 Physcomitrium patens HOM05D005630 ORTHO05D006979 1.3e-28 130.2 101 55.4
unitig_48.g30288 Utricularia gibba HOM05D005630 ORTHO05D006979 1.3e-28 130.2 86 69.8
SMO146G0230 Selaginella moellendorffii HOM05D005630 ORTHO05D006979 1.6e-26 123.2 128 46.9
Mapoly0179s0002 Marchantia polymorpha HOM05D005630 ORTHO05D006979 3.5e-26 122.1 101 54.5
Eucgr.B02192 Eucalyptus grandis HOM05D005630 ORTHO05D006979 6.7e-25 117.9 78 66.7
CBR_g37184 Chara braunii HOM05D005630 ORTHO05D006979 5.3e-22 108.2 99 53.5
Lj7A451T27 Lonicera japonica HOM05D005630 ORTHO05D006979 5.8e-21 104.8 61 78.7
SGA_v2.0_scaffold416G51224 Striga asiatica HOM05D005630 ORTHO05D006979 2.2e-20 102.8 61 73.8
AUR62001080 Chenopodium quinoa HOM05D005630 ORTHO05D006979 3.5e-18 95.5 61 70.5
AUR62004880 Chenopodium quinoa HOM05D005630 ORTHO05D006979 1.5e-16 90.1 61 67.2
MBI07_g26347_MAGBIO Magnolia biondii HOM05D005630 ORTHO05D006979 1.9e-16 89.7 71 66.2
ATR1096G006 Amborella trichopoda HOM05D005630 ORTHO05D006979 1.6e-15 86.7 54 77.8
SEGI_16423 Sequoiadendron giganteum HOM05D005630 ORTHO05D006979 4.1e-14 82.0 66 53.0
MD16G1239100 Malus domestica HOM05D005630 ORTHO05D006979 3.4e-13 79.0 57 63.2
Nn2g11495 Nelumbo nucifera HOM05D005630 ORTHO05D006979 4.5e-13 78.6 66 65.2
Cpa.g.sc20.36 Carica papaya HOM05D005630 ORTHO05D006979 7.7e-13 77.8 65 61.5
TPR.G10852 Trifolium pratense HOM05D005630 ORTHO05D006979 6.5e-12 74.7 49 71.4
Eucgr.L01073 Eucalyptus grandis HOM05D005630 ORTHO05D006979 1.2e-10 70.5 44 68.2
AUR62039003 Chenopodium quinoa HOM05D005630 ORTHO05D006979 3.9e-09 65.5 41 65.9
MCO04G088 Micromonas commoda HOM05D005630 ORTHO05D006979 2.0e-08 63.2 98 30.6
Cre12.g558000 Chlamydomonas reinhardtii HOM05D005630 ORTHO05D006979 1.7e-07 60.1 101 30.7
Medtr5g037160 Medicago truncatula HOM05D005630 ORTHO05D000782 2.2e-07 59.7 34 76.5
SalBow1G6627 Salvia bowleyana HOM05D005630 ORTHO05D006979 1.8e-06 56.6 40 62.5


User provided reference genes

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