Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO210G0275 Papaver somniferum HOM05D005302 ORTHO05D006422 0.0e+00 1083.6 508 100.0
PSO210G3865 Papaver somniferum HOM05D005302 ORTHO05D006422 6.3e-304 1046.6 508 96.1
Nn2g11666 Nelumbo nucifera HOM05D005302 ORTHO05D006422 9.9e-225 783.5 527 70.4
Aqoxy7G03804 Aquilegia oxysepala HOM05D005302 ORTHO05D006422 2.9e-224 781.9 508 72.8
TAR624G0168 Trochodendron aralioides HOM05D005302 ORTHO05D006422 9.0e-218 760.4 513 69.8
Actinidia13324 Actinidia chinensis HOM05D005302 ORTHO05D006422 3.8e-216 755.0 491 71.1
Dinv14245 Davidia involucrata HOM05D005302 ORTHO05D006422 4.9e-216 754.6 428 78.3
Phvul.009G108200 Phaseolus vulgaris HOM05D005302 ORTHO05D006422 1.2e-214 750.0 438 75.3
Rhsim02G0179400 Rhododendron simsii HOM05D005302 ORTHO05D006422 1.2e-214 750.0 495 70.3
CANSAT25G0630 Cannabis sativa HOM05D005302 ORTHO05D006422 6.0e-214 747.7 450 75.6
CiPaw.08G024700 Carya illinoinensis HOM05D005302 ORTHO05D006422 3.0e-213 745.3 465 72.7
Medtr3g110160 Medicago truncatula HOM05D005302 ORTHO05D006422 3.0e-213 745.3 428 76.6
CiPaw.07G205300 Carya illinoinensis HOM05D005302 ORTHO05D006422 1.5e-212 743.0 428 76.6
TWI34G0390 Tripterygium wilfordii HOM05D005302 ORTHO05D006422 2.5e-212 742.3 432 77.3
VMungo1309G1003 Vigna mungo HOM05D005302 ORTHO05D006422 2.5e-212 742.3 467 72.6
MD15G1095400 Malus domestica HOM05D005302 ORTHO05D006422 4.3e-212 741.5 464 73.1
Lalb_Chr08g0243151 Lupinus albus HOM05D005302 ORTHO05D006422 7.4e-212 740.7 442 73.8
Prupe.1G450300 Prunus persica HOM05D005302 ORTHO05D006422 9.6e-212 740.3 489 71.8
Glyma.04G082500 Glycine max HOM05D005302 ORTHO05D006422 1.3e-211 740.0 438 74.7
Gorai.009G050600 Gossypium raimondii HOM05D005302 ORTHO05D006422 2.1e-211 739.2 512 67.4
RcHm_v2.0_Chr6g0306001 Rosa chinensis HOM05D005302 ORTHO05D006422 2.8e-211 738.8 506 68.2
PGR044G1364 Punica granatum HOM05D005302 ORTHO05D006422 3.7e-211 738.4 463 72.6
Ca_15604_v3 Cicer arietinum L. HOM05D005302 ORTHO05D006422 1.8e-210 736.1 472 71.4
Glyma.06G084100 Glycine max HOM05D005302 ORTHO05D006422 1.8e-210 736.1 465 71.8
AUR62009303 Chenopodium quinoa HOM05D005302 ORTHO05D006422 2.4e-210 735.7 514 67.9
Gohir.D05G049300 Gossypium hirsutum HOM05D005302 ORTHO05D006422 2.4e-210 735.7 512 67.0
CSS0024291 Camellia sinensis var. sinensis HOM05D005302 ORTHO05D006422 6.9e-210 734.2 452 72.6
CSS0027627 Camellia sinensis var. sinensis HOM05D005302 ORTHO05D006422 6.9e-210 734.2 452 72.6
EL10Ac2g04046 Beta vulgaris HOM05D005302 ORTHO05D006422 1.5e-209 733.0 510 67.6
Psat5g022320 Pisum sativum HOM05D005302 ORTHO05D006422 2.6e-209 732.3 450 72.4
Atru.chr7.2133 Acer truncatum HOM05D005302 ORTHO05D006422 4.5e-209 731.5 491 68.8
FvH4_2g35770 Fragaria vesca HOM05D005302 ORTHO05D006422 4.5e-209 731.5 482 69.7
MD08G1115600 Malus domestica HOM05D005302 ORTHO05D006422 7.6e-209 730.7 464 72.4
Hma1.2p1_0393F.1_g143080 Hydrangea macrophylla HOM05D005302 ORTHO05D006422 2.2e-208 729.2 427 75.6
Eucgr.C02909 Eucalyptus grandis HOM05D005302 ORTHO05D006422 2.9e-208 728.8 428 75.9
Lj1g0022106 Lotus japonicus HOM05D005302 ORTHO05D006422 2.9e-208 728.8 426 75.8
Thecc.09G042800 Theobroma cacao HOM05D005302 ORTHO05D006422 2.4e-207 725.7 492 68.3
Duzib150G0232 Durio zibethinus HOM05D005302 ORTHO05D006422 2.7e-206 722.2 491 67.4
Gohir.A07G022700 Gossypium hirsutum HOM05D005302 ORTHO05D006422 2.7e-206 722.2 491 67.2
Potri.018G040200 Populus trichocarpa HOM05D005302 ORTHO05D006422 2.7e-206 722.2 511 66.3
Ciclev10008169m.g Citrus clementina HOM05D005302 ORTHO05D006422 3.5e-206 721.8 428 73.6
Cc08_g09240 Coffea canephora HOM05D005302 ORTHO05D006422 4.6e-206 721.5 432 74.1
COL.COLO4_18671 Corchorus olitorius HOM05D005302 ORTHO05D006422 1.3e-205 719.9 482 68.9
Gohir.D07G026100 Gossypium hirsutum HOM05D005302 ORTHO05D006422 2.3e-205 719.2 491 67.2
Haze_21877 Corylus avellana HOM05D005302 ORTHO05D006422 5.1e-205 718.0 538 63.6
Gorai.001G027200 Gossypium raimondii HOM05D005302 ORTHO05D006422 1.9e-204 716.1 465 69.9
FAN27G3010 Fragaria x ananassa HOM05D005302 ORTHO05D006422 4.3e-204 714.9 482 68.7
Gohir.A05G047400 Gossypium hirsutum HOM05D005302 ORTHO05D006422 7.4e-204 714.1 500 66.6
GSVIVG01035645001 Vitis vinifera HOM05D005302 ORTHO05D006422 1.3e-203 713.4 464 69.6
ECA246G0277 Erigeron canadensis HOM05D005302 ORTHO05D006422 1.6e-203 713.0 466 70.8
Manes.16G072000 Manihot esculenta HOM05D005302 ORTHO05D006422 1.6e-203 713.0 495 66.9
MSTRG.11705 Avicennia marina HOM05D005302 ORTHO05D006422 6.2e-203 711.1 440 71.6
CsaV3_2G030970 Cucumis sativus L. HOM05D005302 ORTHO05D006422 1.4e-202 709.9 425 72.9
HanXRQChr08g0236291 Helianthus annuus HOM05D005302 ORTHO05D006422 2.4e-202 709.1 473 68.7
Peaxi162Scf00822g00210 Petunia axillaris HOM05D005302 ORTHO05D006422 4.0e-202 708.4 484 66.7
Nitab4.5_0010908g0010 Nicotiana tabacum HOM05D005302 ORTHO05D006422 5.3e-202 708.0 497 65.2
arahy.Tifrunner.gnm1.ann1.P7Z4SB Arachis hypogaea HOM05D005302 ORTHO05D006422 2.0e-201 706.1 443 71.8
MELO3C011150.2 Cucumis melo HOM05D005302 ORTHO05D006422 2.0e-201 706.1 490 65.9
CARHR240760 Cardamine hirsuta HOM05D005302 ORTHO05D006422 2.6e-201 705.7 447 70.2
QL12p029391 Quercus lobata HOM05D005302 ORTHO05D006422 3.4e-201 705.3 517 64.6
arahy.Tifrunner.gnm1.ann1.R6A5BY Arachis hypogaea HOM05D005302 ORTHO05D006422 7.6e-201 704.1 443 71.6
Sp7g30530 Schrenkiella parvula HOM05D005302 ORTHO05D006422 1.3e-200 703.4 465 67.7
Thhalv10025006m.g Eutrema salsugineum HOM05D005302 ORTHO05D006422 2.9e-200 702.2 462 68.2
Carub.0007s0772 Capsella rubella HOM05D005302 ORTHO05D006422 3.2e-199 698.7 486 64.6
Lj8C588T0 Lonicera japonica HOM05D005302 ORTHO05D006422 5.5e-199 698.0 543 63.0
SalBow4G1479 Salvia bowleyana HOM05D005302 ORTHO05D006422 5.5e-199 698.0 433 71.6
PGSC0003DMG400029051 Solanum tuberosum HOM05D005302 ORTHO05D006422 5.5e-199 698.0 496 65.1
CAN.G21.50 Capsicum annuum HOM05D005302 ORTHO05D006422 7.1e-199 697.6 496 64.9
CDE08G0186 Ceratophyllum demersum HOM05D005302 ORTHO05D006422 1.2e-198 696.8 505 64.0
Migut.A00220 Erythranthe guttata HOM05D005302 ORTHO05D006422 3.5e-198 695.3 435 70.6
SGA_v2.0_scaffold103G29944 Striga asiatica HOM05D005302 ORTHO05D006422 3.5e-198 695.3 494 66.0
Sed0007027 Sechium edule HOM05D005302 ORTHO05D006422 4.6e-198 694.9 425 71.5
Sabra18G0040100 Salix brachista HOM05D005302 ORTHO05D006422 6.0e-198 694.5 503 66.2
AT4G32770 Arabidopsis thaliana HOM05D005302 ORTHO05D006422 1.0e-197 693.7 486 65.0
BolC7t46379H Brassica oleracea HOM05D005302 ORTHO05D006422 1.8e-197 693.0 485 64.7
AL7G18970 Arabidopsis lyrata HOM05D005302 ORTHO05D006422 2.3e-197 692.6 484 64.9
Sopen08g022330 Solanum pennellii HOM05D005302 ORTHO05D006422 2.3e-197 692.6 473 66.6
C07p59340 Brassica napus HOM05D005302 ORTHO05D006422 3.0e-197 692.2 485 64.7
Aa31LG2G17190 Aethionema arabicum HOM05D005302 ORTHO05D006422 6.7e-197 691.0 466 67.8
Solyc08g068570.4 Solanum lycopersicum HOM05D005302 ORTHO05D006422 8.7e-197 690.6 473 66.4
ATR0315G120 Amborella trichopoda HOM05D005302 ORTHO05D006422 4.3e-196 688.3 425 72.9
A03p61580 Brassica napus HOM05D005302 ORTHO05D006422 4.3e-196 688.3 486 64.4
BraA03t15200Z Brassica rapa HOM05D005302 ORTHO05D006422 4.3e-196 688.3 486 64.4
Lsat_1_v5_gn_5_33600 Lactuca sativa HOM05D005302 ORTHO05D006422 4.3e-196 688.3 471 66.5
CDE05G0893 Ceratophyllum demersum HOM05D005302 ORTHO05D006422 3.1e-194 682.2 477 63.9
DCAR_003119 Daucus carota HOM05D005302 ORTHO05D006422 3.1e-194 682.2 482 65.1
unitig_32.g11070 Utricularia gibba HOM05D005302 ORTHO05D006422 1.3e-192 676.8 456 66.7
FAN20G2881 Fragaria x ananassa HOM05D005302 ORTHO05D006422 1.7e-192 676.4 497 65.2
Os02g0276500 Oryza sativa ssp. japonica HOM05D005302 ORTHO05D006422 2.2e-192 676.0 424 71.0
FAN15G3230 Fragaria x ananassa HOM05D005302 ORTHO05D006422 5.0e-192 674.9 512 62.7
MBI04_g05261_MAGBIO Magnolia biondii HOM05D005302 ORTHO05D006422 2.5e-191 672.5 560 58.2
ClCG08G012300 Citrullus lanatus HOM05D005302 ORTHO05D006422 4.1e-186 655.2 432 68.5
THA.LOC104803808 Tarenaya hassleriana HOM05D005302 ORTHO05D006422 1.0e-184 650.6 406 71.7
Cpa.g.sc7.259 Carica papaya HOM05D005302 ORTHO05D006422 1.2e-182 643.7 378 76.2
LjContig00226g0022694 Lotus japonicus HOM05D005302 ORTHO05D006422 1.4e-181 640.2 380 74.7
LjContig00518g0000858 Lotus japonicus HOM05D005302 ORTHO05D006422 1.4e-181 640.2 380 74.7
AUR62041718 Chenopodium quinoa HOM05D005302 ORTHO05D006422 6.7e-181 637.9 455 66.4
Nitab4.5_0000513g0060 Nicotiana tabacum HOM05D005302 ORTHO05D006422 6.7e-181 637.9 550 57.5
Oeu036363.2 Olea europaea HOM05D005302 ORTHO05D006422 5.7e-180 634.8 436 68.8
Hund19525 Selenicereus undatus HOM05D005302 ORTHO05D006422 1.8e-178 629.8 499 60.9
Sc23g0005290 Simmondsia chinensis HOM05D005302 ORTHO05D006422 7.0e-178 627.9 414 68.4
Ah.16g105570 Amaranthus hybridus HOM05D005302 ORTHO05D006422 1.1e-175 620.5 351 78.1
Lj1g0000494 Lotus japonicus HOM05D005302 ORTHO05D006422 1.4e-173 613.6 380 73.2
Cfa013434 Carpinus fangiana HOM05D005302 ORTHO05D006422 1.6e-166 590.1 412 66.7
Cfa013357 Carpinus fangiana HOM05D005302 ORTHO05D006422 1.4e-165 587.0 485 59.2
AagrBONN_evm.TU.Sc2ySwM_368.1981 Anthoceros agrestis HOM05D005302 ORTHO05D006422 1.8e-165 586.6 417 63.8
HPP92_005269 Vanilla planifolia HOM05D005302 ORTHO05D006422 1.1e-162 577.4 461 60.1
Mapoly0027s0036 Marchantia polymorpha HOM05D005302 ORTHO05D006422 1.6e-161 573.5 445 58.9
Lj1g0015489 Lotus japonicus HOM05D005302 ORTHO05D006422 2.9e-160 569.3 426 63.1
vmacro11066 Vaccinium macrocarpon HOM05D005302 ORTHO05D006422 2.5e-159 566.2 408 65.9
Cfa013356 Carpinus fangiana HOM05D005302 ORTHO05D006422 7.2e-159 564.7 326 76.4
Pp3c7_470 Physcomitrium patens HOM05D005302 ORTHO05D006422 2.1e-158 563.1 439 58.8
Haze_21992 Corylus avellana HOM05D005302 ORTHO05D006422 1.4e-157 560.5 518 53.7
SMO351G0603 Selaginella moellendorffii HOM05D005302 ORTHO05D006422 9.8e-148 527.7 396 58.6
Lj1g0026118 Lotus japonicus HOM05D005302 ORTHO05D006422 6.6e-144 515.0 427 59.5
Pp3c20_5100 Physcomitrium patens HOM05D005302 ORTHO05D006422 8.0e-142 508.1 425 54.8
Zm00001eb237270 Zea mays HOM05D005302 ORTHO05D006422 2.3e-136 490.0 319 67.7
CBR_g222 Chara braunii HOM05D005302 ORTHO05D006422 4.0e-133 479.2 418 54.1
Cc07_g15020 Coffea canephora HOM05D005302 ORTHO05D006422 4.7e-126 455.7 268 73.9
Hma1.2p1_1884F.1_g306470 Hydrangea macrophylla HOM05D005302 ORTHO05D006422 8.1e-118 428.3 263 72.6
Cre01.g013801 Chlamydomonas reinhardtii HOM05D005302 ORTHO05D006422 9.6e-103 378.3 455 42.4
Lj7A704G80 Lonicera japonica HOM05D005302 ORTHO05D006422 5.4e-98 362.5 218 74.3
Hma1.2p1_1884F.1_g306480 Hydrangea macrophylla HOM05D005302 ORTHO05D006422 2.0e-76 290.8 183 72.1
Lj7A704G81 Lonicera japonica HOM05D005302 ORTHO05D006422 8.2e-70 268.9 162 72.8
MCO11G337 Micromonas commoda HOM05D005302 ORTHO05D006422 4.1e-69 266.5 423 37.6
CDE05G2043 Ceratophyllum demersum HOM05D005302 ORTHO05D006422 1.2e-65 255.0 449 35.2
Hma1.2p1_0393F.1_g143070 Hydrangea macrophylla HOM05D005302 ORTHO05D006422 8.2e-62 242.3 148 72.3
SEGI_29042 Sequoiadendron giganteum HOM05D005302 ORTHO05D006422 1.8e-56 224.6 110 85.5
Hma1.2p1_0393F.1_g143090 Hydrangea macrophylla HOM05D005302 ORTHO05D006422 2.8e-54 217.2 128 75.8
Glyma.04G082300 Glycine max HOM05D005302 ORTHO05D006422 1.8e-53 214.5 180 58.3
SEGI_31241 Sequoiadendron giganteum HOM05D005302 ORTHO05D006422 5.0e-51 206.5 148 60.8
FAN24G1627 Fragaria x ananassa HOM05D005302 ORTHO05D006422 2.2e-43 181.0 118 68.6
Potri.006G240100 Populus trichocarpa HOM05D005302 ORTHO05D006422 4.9e-38 163.3 184 46.7
SEGI_07805 Sequoiadendron giganteum HOM05D005302 ORTHO05D006422 6.3e-38 162.9 106 66.0
Sabra18G0041600 Salix brachista HOM05D005302 ORTHO05D006422 9.1e-37 159.1 109 64.2
arahy.Tifrunner.gnm1.ann1.B6YE6K Arachis hypogaea HOM05D005302 ORTHO05D006422 7.8e-28 129.4 179 44.1
CDE05G1694 Ceratophyllum demersum HOM05D005302 ORTHO05D006422 3.3e-18 97.4 61 67.2
Sabra18G0041700 Salix brachista HOM05D005302 ORTHO05D006422 9.2e-13 79.3 60 51.7
BcaC09g52073 Brassica carinata HOM05D002602 ORTHO05D002661 6.8e-08 63.2 41 63.4
CDE02G1858 Ceratophyllum demersum HOM05D005302 ORTHO05D006422 3.7e-06 57.4 113 32.7


User provided reference genes

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