Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO210G0183 Papaver somniferum HOM05D007722 ORTHO05D009730 9.6e-71 270.0 133 100.0
PSO210G5680 Papaver somniferum HOM05D007722 ORTHO05D009730 1.7e-54 216.1 140 81.4
TAR636G1020 Trochodendron aralioides HOM05D007722 ORTHO05D009730 9.5e-18 94.0 123 48.8
Nn2g12058 Nelumbo nucifera HOM05D007722 ORTHO05D009730 1.4e-13 80.1 116 44.0
MBI01_g35411_MAGBIO Magnolia biondii HOM05D007722 ORTHO05D009730 3.2e-13 79.0 89 51.7
Aqoxy7G03685 Aquilegia oxysepala HOM05D007722 ORTHO05D009730 5.4e-13 78.2 95 48.4
Dinv30597 Davidia involucrata HOM05D007722 ORTHO05D009730 5.9e-12 74.7 76 52.6
Zm00001eb221290 Zea mays HOM05D007722 ORTHO05D009730 5.0e-11 71.6 71 50.7
CSS0036618 Camellia sinensis var. sinensis HOM05D007722 ORTHO05D009730 8.6e-11 70.9 71 54.9
Gohir.D10G075700 Gossypium hirsutum HOM05D007722 ORTHO05D009730 8.6e-11 70.9 82 51.2
Oeu045155.1 Olea europaea HOM05D007722 ORTHO05D009730 1.1e-10 70.5 100 42.0
Haze_16545 Corylus avellana HOM05D007722 ORTHO05D009730 1.5e-10 70.1 119 44.5
Psat7g256360 Pisum sativum HOM05D007722 ORTHO05D009730 1.5e-10 70.1 112 45.5
GSVIVG01017323001 Vitis vinifera HOM05D007722 ORTHO05D009730 1.5e-10 70.1 107 44.9
Gohir.A10G073900 Gossypium hirsutum HOM05D007722 ORTHO05D009730 2.5e-10 69.3 75 52.0
Potri.001G192500 Populus trichocarpa HOM05D007722 ORTHO05D009730 4.3e-10 68.6 80 51.2
Thecc.06G022100 Theobroma cacao HOM05D007722 ORTHO05D009730 5.6e-10 68.2 113 43.4
Gorai.011G083600 Gossypium raimondii HOM05D007722 ORTHO05D009730 7.3e-10 67.8 82 48.8
COL.COLO4_12955 Corchorus olitorius HOM05D007722 ORTHO05D009730 1.2e-09 67.0 76 50.0
Migut.D01071 Erythranthe guttata HOM05D007722 ORTHO05D009730 1.2e-09 67.0 110 40.9
Os01g0392100 Oryza sativa ssp. japonica HOM05D007722 ORTHO05D009730 1.6e-09 66.6 62 53.2
EL10Ac9g21908 Beta vulgaris HOM05D007722 ORTHO05D009730 2.1e-09 66.2 125 40.8
Gohir.A05G126200 Gossypium hirsutum HOM05D007722 ORTHO05D009730 2.8e-09 65.9 121 40.5
Gohir.D05G127100 Gossypium hirsutum HOM05D007722 ORTHO05D009730 2.8e-09 65.9 121 40.5
Cfa001975 Carpinus fangiana HOM05D007722 ORTHO05D009730 4.7e-09 65.1 126 41.3
ClCG09G002890 Citrullus lanatus HOM05D007722 ORTHO05D009730 4.7e-09 65.1 117 40.2
Duzib160G0092 Durio zibethinus HOM05D007722 ORTHO05D009730 6.1e-09 64.7 114 43.0
Gorai.009G131200 Gossypium raimondii HOM05D007722 ORTHO05D009730 6.1e-09 64.7 121 39.7
Nitab4.5_0007793g0010 Nicotiana tabacum HOM05D007722 ORTHO05D009730 6.1e-09 64.7 131 37.4
CiPaw.01G246700 Carya illinoinensis HOM05D007722 ORTHO05D009730 1.8e-08 63.2 54 57.4
Rhsim08G0213600 Rhododendron simsii HOM05D007722 ORTHO05D009730 1.8e-08 63.2 81 44.4
Sed0026756 Sechium edule HOM05D007722 ORTHO05D009730 1.8e-08 63.2 106 42.5
PGSC0003DMG401000617 Solanum tuberosum HOM05D007722 ORTHO05D009730 1.8e-08 63.2 83 47.0
SGA_v2.0_scaffold37G14773 Striga asiatica HOM05D007722 ORTHO05D009730 1.8e-08 63.2 107 38.3
Phvul.010G155500 Phaseolus vulgaris HOM05D007722 ORTHO05D009730 3.1e-08 62.4 77 54.5
CANSAT56G0372 Cannabis sativa HOM05D007722 ORTHO05D009730 4.0e-08 62.0 52 61.5
Glyma.07G030600 Glycine max HOM05D007722 ORTHO05D009730 6.8e-08 61.2 115 40.0
Lalb_Chr04g0262381 Lupinus albus HOM05D007722 ORTHO05D009730 8.9e-08 60.8 82 46.3
Lj3g0002989 Lotus japonicus HOM05D007722 ORTHO05D009730 1.2e-07 60.5 115 40.0
PGR102G2260 Punica granatum HOM05D007722 ORTHO05D009730 1.5e-07 60.1 131 40.5
BcaC09g48556 Brassica carinata HOM05D007722 ORTHO05D009730 2.0e-07 59.7 72 43.1
Glyma.08G212200 Glycine max HOM05D007722 ORTHO05D009730 3.4e-07 58.9 153 36.6
Medtr4g010270 Medicago truncatula HOM05D007722 ORTHO05D009730 3.4e-07 58.9 49 63.3
Prupe.3G085400 Prunus persica HOM05D007722 ORTHO05D009730 4.4e-07 58.5 72 48.6
THA.LOC104810506 Tarenaya hassleriana HOM05D007722 ORTHO05D009730 4.4e-07 58.5 47 57.4
MD17G1210100 Malus domestica HOM05D007722 ORTHO05D009730 5.8e-07 58.2 140 37.9
Nitab4.5_0011590g0030 Nicotiana tabacum HOM05D007722 ORTHO05D009730 7.5e-07 57.8 140 35.0
VMungo0331G1522 Vigna mungo HOM05D007722 ORTHO05D009730 7.5e-07 57.8 63 47.6
BolC1t04820H Brassica oleracea HOM05D000771 ORTHO05D001963 1.3e-06 57.0 77 41.6
CARHR090870 Cardamine hirsuta HOM05D007722 ORTHO05D009730 1.3e-06 57.0 83 37.3
FAN09G0448 Fragaria x ananassa HOM05D007722 ORTHO05D009730 1.3e-06 57.0 74 45.9
Manes.04G113466 Manihot esculenta HOM05D007722 ORTHO05D009730 1.3e-06 57.0 89 41.6
Solyc03g116660.3 Solanum lycopersicum HOM05D007722 ORTHO05D009730 1.7e-06 56.6 130 36.9
Sopen03g035570 Solanum pennellii HOM05D007722 ORTHO05D009730 1.7e-06 56.6 130 36.9
Carub.0003s1552 Capsella rubella HOM05D007722 ORTHO05D009730 2.2e-06 56.2 77 40.3
Sabra01G0149600 Salix brachista HOM05D007722 ORTHO05D009730 2.9e-06 55.8 42 61.9
CDE06G0954 Ceratophyllum demersum HOM05D007722 ORTHO05D009730 4.9e-06 55.1 80 42.5
ECA232G4504 Erigeron canadensis HOM05D000985 ORTHO05D000866 4.9e-06 55.1 69 43.5
FvH4_6g29860 Fragaria vesca HOM05D007722 ORTHO05D009730 4.9e-06 55.1 74 44.6
FAN14G1239 Fragaria x ananassa HOM05D007722 ORTHO05D009730 4.9e-06 55.1 74 44.6
Manes.11G056000 Manihot esculenta HOM05D007722 ORTHO05D009730 4.9e-06 55.1 123 39.8
Thhalv10021781m.g Eutrema salsugineum HOM05D007722 ORTHO05D009730 6.4e-06 54.7 93 36.6
QL05p029543 Quercus lobata HOM05D007722 ORTHO05D009730 6.4e-06 54.7 129 36.4
unitig_0.g1117 Utricularia gibba HOM05D007722 ORTHO05D009730 6.4e-06 54.7 49 53.1
THA.LOC104818136 Tarenaya hassleriana HOM05D007722 ORTHO05D009730 8.3e-06 54.3 43 53.5


User provided reference genes

Program Settings