Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO210G0158 Papaver somniferum HOM05D007231 ORTHO05D009024 4.9e-140 501.1 252 100.0
TAR636G3122 Trochodendron aralioides HOM05D007231 ORTHO05D009024 1.9e-99 366.3 252 71.8
Actinidia00741 Actinidia chinensis HOM05D007231 ORTHO05D009024 1.8e-97 359.8 252 71.0
GSVIVG01011110001 Vitis vinifera HOM05D007231 ORTHO05D009024 2.3e-97 359.4 242 72.3
Dinv11248 Davidia involucrata HOM05D007231 ORTHO05D009024 4.3e-96 355.1 252 71.4
TAR365G1202 Trochodendron aralioides HOM05D007231 ORTHO05D009024 4.3e-96 355.1 252 70.2
Actinidia09146 Actinidia chinensis HOM05D007231 ORTHO05D009024 5.6e-96 354.8 252 71.4
Nn1g02166 Nelumbo nucifera HOM05D007231 ORTHO05D009024 2.8e-95 352.4 252 72.6
Dinv32951 Davidia involucrata HOM05D007231 ORTHO05D009024 1.1e-94 350.5 247 70.9
COL.COLO4_09128 Corchorus olitorius HOM05D007231 ORTHO05D009024 2.4e-94 349.4 252 70.6
Gohir.D08G077400 Gossypium hirsutum HOM05D007231 ORTHO05D009024 4.0e-94 348.6 246 71.1
Gorai.004G082300 Gossypium raimondii HOM05D007231 ORTHO05D009024 9.0e-94 347.4 246 71.1
Thecc.01G282400 Theobroma cacao HOM05D007231 ORTHO05D009024 2.0e-93 346.3 245 70.2
Peaxi162Scf00570g00058 Petunia axillaris HOM05D007231 ORTHO05D009024 2.6e-93 345.9 252 65.9
CiPaw.08G104200 Carya illinoinensis HOM05D007231 ORTHO05D009024 3.4e-93 345.5 242 69.4
Ciclev10021857m.g Citrus clementina HOM05D007231 ORTHO05D009024 3.4e-93 345.5 253 68.8
Gohir.A08G069100 Gossypium hirsutum HOM05D007231 ORTHO05D009024 9.9e-93 344.0 246 70.3
Aqoxy2G03271 Aquilegia oxysepala HOM05D007231 ORTHO05D009024 2.2e-92 342.8 248 69.4
CAN.G609.11 Capsicum annuum HOM05D007231 ORTHO05D009024 2.2e-92 342.8 252 65.1
Duzib211G0396 Durio zibethinus HOM05D007231 ORTHO05D009024 2.9e-92 342.4 252 69.0
Manes.05G074400 Manihot esculenta HOM05D007231 ORTHO05D009024 3.8e-92 342.0 252 67.9
Nitab4.5_0001028g0140 Nicotiana tabacum HOM05D007231 ORTHO05D009024 8.4e-92 340.9 249 67.1
Atru.chr5.1389 Acer truncatum HOM05D007231 ORTHO05D009024 1.9e-91 339.7 252 68.3
MBI19_g24716_MAGBIO Magnolia biondii HOM05D007231 ORTHO05D009024 1.9e-91 339.7 247 69.6
Potri.019G046400 Populus trichocarpa HOM05D007231 ORTHO05D009024 5.5e-91 338.2 252 70.2
Cc01_g19680 Coffea canephora HOM05D007231 ORTHO05D009024 9.3e-91 337.4 252 67.1
Solyc09g064930.3 Solanum lycopersicum HOM05D007231 ORTHO05D009024 1.2e-90 337.0 248 64.9
Sabra19G0055900 Salix brachista HOM05D007231 ORTHO05D009024 1.6e-90 336.7 252 69.8
Sopen09g026640 Solanum pennellii HOM05D007231 ORTHO05D009024 4.6e-90 335.1 248 64.5
Cfa006118 Carpinus fangiana HOM05D007231 ORTHO05D009024 6.0e-90 334.7 257 65.4
Nitab4.5_0002386g0100 Nicotiana tabacum HOM05D002055 ORTHO05D009024 1.3e-89 333.6 249 65.9
Rhsim13G0023500 Rhododendron simsii HOM05D007231 ORTHO05D009024 1.3e-89 333.6 252 66.3
CANSAT25G1925 Cannabis sativa HOM05D007231 ORTHO05D009024 3.0e-89 332.4 252 66.3
Cpa.g.sc64.168 Carica papaya HOM05D007231 ORTHO05D009024 3.9e-89 332.0 248 67.3
vmacro02556 Vaccinium macrocarpon HOM05D007231 ORTHO05D009024 1.5e-88 330.1 252 67.1
QL12p022281 Quercus lobata HOM05D007231 ORTHO05D009024 1.9e-88 329.7 251 66.5
Eucgr.K03384 Eucalyptus grandis HOM05D007231 ORTHO05D009024 3.3e-88 328.9 239 69.0
MSTRG.18222 Avicennia marina HOM05D007231 ORTHO05D009024 1.6e-87 326.6 242 65.7
HanXRQChr01g0002311 Helianthus annuus HOM05D007231 ORTHO05D009024 3.1e-86 322.4 236 66.1
Lsat_1_v5_gn_5_190100 Lactuca sativa HOM05D007231 ORTHO05D009024 3.1e-86 322.4 248 64.1
Oeu015959.1 Olea europaea HOM05D007231 ORTHO05D009024 9.0e-86 320.9 226 68.1
THA.LOC104801225 Tarenaya hassleriana HOM05D007231 ORTHO05D009024 3.4e-85 318.9 249 65.9
SalBow4G2275 Salvia bowleyana HOM05D007231 ORTHO05D009024 4.5e-85 318.5 249 63.9
HanXRQChr11g0327631 Helianthus annuus HOM05D007231 ORTHO05D009024 2.9e-84 315.8 248 64.1
Lj2C1175G18 Lonicera japonica HOM05D007231 ORTHO05D009024 2.9e-84 315.8 317 56.8
Prupe.8G243400 Prunus persica HOM05D007231 ORTHO05D009024 1.1e-83 313.9 252 64.3
Lj5g0005680 Lotus japonicus HOM05D007231 ORTHO05D009024 1.4e-83 313.5 243 63.8
RcHm_v2.0_Chr6g0291381 Rosa chinensis HOM05D007231 ORTHO05D009024 1.4e-83 313.5 254 63.4
Migut.D00275 Erythranthe guttata HOM05D007231 ORTHO05D009024 3.2e-83 312.4 249 62.7
Lalb_Chr02g0142831 Lupinus albus HOM05D007231 ORTHO05D009024 4.2e-83 312.0 247 64.0
Aa31LG1G9290 Aethionema arabicum HOM05D007231 ORTHO05D009024 2.1e-82 309.7 249 64.7
A10p01800 Brassica napus HOM05D007231 ORTHO05D009024 2.1e-82 309.7 248 64.5
MD11G1288600 Malus domestica HOM05D007231 ORTHO05D009024 6.0e-82 308.1 254 61.4
Oeu022878.1 Olea europaea HOM05D007231 ORTHO05D009024 6.0e-82 308.1 230 65.2
BcaC05g24637 Brassica carinata HOM05D007231 ORTHO05D009024 7.9e-82 307.8 248 64.5
arahy.Tifrunner.gnm1.ann1.9UA39Y Arachis hypogaea HOM05D007231 ORTHO05D009024 1.0e-81 307.4 249 63.5
arahy.Tifrunner.gnm1.ann1.LJDI86 Arachis hypogaea HOM05D007231 ORTHO05D009024 1.0e-81 307.4 249 63.5
Glyma.10G025400 Glycine max HOM05D007231 ORTHO05D009024 1.3e-81 307.0 243 63.8
CARHR002550 Cardamine hirsuta HOM05D007231 ORTHO05D009024 3.0e-81 305.8 243 64.6
Lalb_Chr06g0163091 Lupinus albus HOM05D007231 ORTHO05D009024 5.1e-81 305.1 243 63.8
Phvul.007G170300 Phaseolus vulgaris HOM05D007231 ORTHO05D009024 6.7e-81 304.7 243 64.6
SGA_v2.0_scaffold11G05804 Striga asiatica HOM05D002055 ORTHO05D002120 8.7e-81 304.3 253 58.5
BraA10t42455Z Brassica rapa HOM05D007231 ORTHO05D009024 1.1e-80 303.9 248 63.7
FvH4_2g23810 Fragaria vesca HOM05D007231 ORTHO05D009024 1.1e-80 303.9 255 62.7
AUR62036799 Chenopodium quinoa HOM05D007231 ORTHO05D009024 1.9e-80 303.1 279 57.3
AT1G03250 Arabidopsis thaliana HOM05D007231 ORTHO05D009024 2.5e-80 302.8 243 63.8
AL1G12740 Arabidopsis lyrata HOM05D007231 ORTHO05D009024 4.3e-80 302.0 243 64.2
Thhalv10008549m.g Eutrema salsugineum HOM05D007231 ORTHO05D009024 4.3e-80 302.0 247 63.6
ECA248G0248 Erigeron canadensis HOM05D002055 ORTHO05D002120 9.7e-80 300.8 248 61.3
CsaV3_7G028660 Cucumis sativus L. HOM05D007231 ORTHO05D009024 1.3e-79 300.4 248 62.1
Sp1g02240 Schrenkiella parvula HOM05D007231 ORTHO05D009024 1.3e-79 300.4 243 63.8
BcaC05g24551 Brassica carinata HOM05D007231 ORTHO05D009024 4.8e-79 298.5 249 63.5
C05p01780 Brassica napus HOM05D007231 ORTHO05D009024 6.3e-79 298.1 259 61.4
BolC5t28956H Brassica oleracea HOM05D007231 ORTHO05D009024 8.2e-79 297.7 255 62.0
Ca_09766_v3 Cicer arietinum L. HOM05D002055 ORTHO05D002120 1.4e-78 297.0 243 60.9
MELO3C015851.2 Cucumis melo HOM05D007231 ORTHO05D009024 1.4e-78 297.0 248 61.3
FAN27G1680 Fragaria x ananassa HOM05D007231 ORTHO05D009024 1.4e-78 297.0 262 61.1
EL10Ac7g17220 Beta vulgaris HOM05D007231 ORTHO05D009024 1.8e-78 296.6 303 54.1
VMungo0720G1677 Vigna mungo HOM05D002055 ORTHO05D002120 1.8e-78 296.6 222 67.1
Hund05352 Selenicereus undatus HOM05D007231 ORTHO05D009024 1.2e-77 293.9 252 62.3
Carub.0001s0236 Capsella rubella HOM05D007231 ORTHO05D009024 1.5e-77 293.5 249 60.6
CDE04G0796 Ceratophyllum demersum HOM05D007231 ORTHO05D009024 7.7e-77 291.2 242 61.2
SGA_v2.0_scaffold1G00456 Striga asiatica HOM05D007231 ORTHO05D009024 1.7e-76 290.0 248 58.9
TWI14G0923 Tripterygium wilfordii HOM05D002055 ORTHO05D002120 8.5e-76 287.7 200 71.0
Psat6g125920 Pisum sativum HOM05D007231 ORTHO05D009024 1.1e-75 287.3 244 60.2
Sed0024964 Sechium edule HOM05D002055 ORTHO05D002120 7.2e-75 284.6 234 60.7
CSS0040014 Camellia sinensis var. sinensis HOM05D007231 ORTHO05D009024 6.7e-73 278.1 190 70.5
FAN20G2044 Fragaria x ananassa HOM05D007231 ORTHO05D009024 8.8e-73 277.7 303 52.8
Ciclev10022442m.g Citrus clementina HOM05D007231 ORTHO05D009024 3.3e-72 275.8 188 70.2
Medtr1g072510 Medicago truncatula HOM05D007231 ORTHO05D009024 7.4e-72 274.6 232 58.6
Duzib138G1636 Durio zibethinus HOM05D007231 ORTHO05D009024 1.8e-70 270.0 252 59.5
ATR0626G005 Amborella trichopoda HOM05D007231 ORTHO05D009024 6.9e-70 268.1 224 60.7
Os12g0144000 Oryza sativa ssp. japonica HOM05D007231 ORTHO05D009024 9.1e-70 267.7 243 56.0
Os11g0147100 Oryza sativa ssp. japonica HOM05D007231 ORTHO05D009024 4.5e-69 265.4 248 53.6
PGR044G2216 Punica granatum HOM05D007231 ORTHO05D009024 4.5e-69 265.4 188 69.7
Zm00001eb342980 Zea mays HOM05D007231 ORTHO05D009024 1.1e-67 260.8 246 52.4
unitig_0.g109 Utricularia gibba HOM05D007231 ORTHO05D009024 2.5e-67 259.6 209 57.9
Zm00001eb196600 Zea mays HOM05D007231 ORTHO05D009024 6.1e-66 255.0 249 53.4
ClCG09G006940 Citrullus lanatus HOM05D002055 ORTHO05D002120 1.8e-65 253.4 200 64.0
HPP92_016066 Vanilla planifolia HOM05D006695 ORTHO05D008239 3.5e-61 239.2 202 60.4
AUR62039907 Chenopodium quinoa HOM05D007231 ORTHO05D009024 4.4e-56 222.2 152 67.8
Sc05g0004910 Simmondsia chinensis HOM05D007231 ORTHO05D009024 4.8e-55 218.8 161 67.1
SEGI_15193 Sequoiadendron giganteum HOM05D007231 ORTHO05D009024 2.2e-39 166.8 221 41.6
Mapoly0057s0044 Marchantia polymorpha HOM05D007231 ORTHO05D009024 1.8e-33 147.1 222 40.1
TPR.G19967 Trifolium pratense HOM05D007231 ORTHO05D009024 2.6e-32 143.3 117 58.1
SMO137G0298 Selaginella moellendorffii HOM05D007231 ORTHO05D009024 1.0e-25 121.3 208 37.0
SMO170G0043 Selaginella moellendorffii HOM05D007231 ORTHO05D009024 2.3e-25 120.2 208 36.5
Pp3c4_28170 Physcomitrium patens HOM05D007231 ORTHO05D009024 2.9e-23 113.2 216 33.8
AagrBONN_evm.TU.Sc2ySwM_117.667 Anthoceros agrestis HOM05D007231 ORTHO05D009024 2.7e-21 106.7 169 34.3
Cc01_g19320 Coffea canephora HOM05D007231 ORTHO05D009024 1.3e-20 104.4 137 48.2
CDE02G1070 Ceratophyllum demersum HOM05D007231 ORTHO05D009024 2.3e-17 93.6 130 40.8
MCO13G326 Micromonas commoda HOM05D007231 ORTHO05D009024 3.1e-17 93.2 185 33.5
Cre01.g040100 Chlamydomonas reinhardtii HOM05D007231 ORTHO05D009024 2.0e-16 90.5 197 31.5
TPR.G24733 Trifolium pratense HOM05D007231 ORTHO05D009024 5.4e-14 82.4 68 60.3
BcaC05g24635 Brassica carinata HOM05D007231 ORTHO05D009024 1.2e-13 81.3 76 55.3
CDE02G2493 Ceratophyllum demersum HOM05D007231 ORTHO05D009024 1.1e-09 68.2 67 55.2


User provided reference genes

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