Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO210G0145 Papaver somniferum HOM05D007536 ORTHO05D009390 8.3e-87 325.5 159 100.0
TAR636G1433 Trochodendron aralioides HOM05D007536 ORTHO05D009390 4.3e-27 127.1 127 51.2
MBI10_g13809_MAGBIO Magnolia biondii HOM05D007536 ORTHO05D009390 1.6e-26 125.2 123 53.7
Nn1g02810 Nelumbo nucifera HOM05D007536 ORTHO05D009390 9.0e-25 119.4 126 48.4
Aqoxy5G00211 Aquilegia oxysepala HOM05D007536 ORTHO05D009390 5.9e-24 116.7 117 51.3
Dinv24676 Davidia involucrata HOM05D007536 ORTHO05D009390 7.6e-24 116.3 126 45.2
Dinv18987 Davidia involucrata HOM05D007536 ORTHO05D009390 2.9e-23 114.4 126 46.8
GSVIVG01023504001 Vitis vinifera HOM05D007536 ORTHO05D009390 2.7e-21 107.8 171 37.4
ClCG03G009740 Citrullus lanatus HOM05D007536 ORTHO05D009390 1.8e-20 105.1 134 39.6
TAR362G0895 Trochodendron aralioides HOM05D007536 ORTHO05D009390 1.8e-20 105.1 126 44.4
Hma1.2p1_2103F.1_g314080 Hydrangea macrophylla HOM05D007536 ORTHO05D009390 2.3e-20 104.8 126 40.5
Lj2C43T1 Lonicera japonica HOM05D007536 ORTHO05D009390 6.7e-20 103.2 123 41.5
CiPaw.15G107000 Carya illinoinensis HOM05D007536 ORTHO05D009390 8.7e-20 102.8 131 41.2
CDE04G1469 Ceratophyllum demersum HOM05D007536 ORTHO05D009390 1.5e-19 102.1 112 48.2
QL03p030462 Quercus lobata HOM05D007536 ORTHO05D009390 1.5e-19 102.1 119 42.9
CSS0008501 Camellia sinensis var. sinensis HOM05D007536 ORTHO05D009390 7.4e-19 99.8 126 42.1
Sed0012628 Sechium edule HOM05D007536 ORTHO05D009390 7.4e-19 99.8 146 36.3
Manes.08G053700 Manihot esculenta HOM05D007536 ORTHO05D009390 9.7e-19 99.4 114 45.6
MELO3C010129.2 Cucumis melo HOM05D007536 ORTHO05D009390 3.7e-18 97.4 133 37.6
MBI07_g16910_MAGBIO Magnolia biondii HOM05D007536 ORTHO05D009390 8.2e-18 96.3 107 46.7
Gohir.D11G257700 Gossypium hirsutum HOM05D007536 ORTHO05D009390 1.8e-17 95.1 133 38.3
Gorai.007G276000 Gossypium raimondii HOM05D007536 ORTHO05D009390 1.8e-17 95.1 133 38.3
AUR62004838 Chenopodium quinoa HOM05D007536 ORTHO05D009390 3.1e-17 94.4 174 36.8
Ciclev10019470m.g Citrus clementina HOM05D007536 ORTHO05D009390 3.1e-17 94.4 158 34.8
Sed0002849 Sechium edule HOM05D007536 ORTHO05D009390 3.1e-17 94.4 135 37.8
Oeu000315.1 Olea europaea HOM05D007536 ORTHO05D009390 9.1e-17 92.8 139 32.4
Cpa.g.sc162.41 Carica papaya HOM05D007536 ORTHO05D009390 1.2e-16 92.4 126 37.3
Prupe.6G350100 Prunus persica HOM05D007536 ORTHO05D009390 1.5e-16 92.0 126 37.3
Haze_04425 Corylus avellana HOM05D007536 ORTHO05D009390 2.0e-16 91.7 133 38.3
Thecc.05G270900 Theobroma cacao HOM05D007536 ORTHO05D009390 2.0e-16 91.7 127 39.4
FAN05G1587 Fragaria x ananassa HOM05D007536 ORTHO05D009390 3.4e-16 90.9 130 37.7
FAN14G3895 Fragaria x ananassa HOM05D007536 ORTHO05D009390 4.5e-16 90.5 115 40.9
FvH4_6g01910 Fragaria vesca HOM05D007536 ORTHO05D009390 5.9e-16 90.1 130 37.7
FAN05G2252 Fragaria x ananassa HOM05D007536 ORTHO05D009390 5.9e-16 90.1 115 40.9
FAN14G0137 Fragaria x ananassa HOM05D007536 ORTHO05D009390 5.9e-16 90.1 130 37.7
Nitab4.5_0003780g0060 Nicotiana tabacum HOM05D007536 ORTHO05D009390 5.9e-16 90.1 122 36.9
Peaxi162Scf00528g00022 Petunia axillaris HOM05D007536 ORTHO05D009390 1.0e-15 89.4 132 37.1
ATR0736G097 Amborella trichopoda HOM05D007536 ORTHO05D009390 1.3e-15 89.0 58 63.8
FAN09G4642 Fragaria x ananassa HOM05D007536 ORTHO05D009390 1.3e-15 89.0 130 37.7
MD04G1230200 Malus domestica HOM05D007536 ORTHO05D009390 1.3e-15 89.0 126 39.7
Sc20g0000630 Simmondsia chinensis HOM05D007536 ORTHO05D009390 1.3e-15 89.0 127 39.4
Lalb_Chr02g0149121 Lupinus albus HOM05D007536 ORTHO05D009390 2.2e-15 88.2 111 40.5
Sopen04g005180 Solanum pennellii HOM05D007536 ORTHO05D009390 2.2e-15 88.2 136 36.8
Gohir.A13G167300 Gossypium hirsutum HOM05D007536 ORTHO05D009390 2.9e-15 87.8 136 36.8
Cc02_g08820 Coffea canephora HOM05D007536 ORTHO05D009390 3.8e-15 87.4 143 32.9
Sp1g07270 Schrenkiella parvula HOM05D007536 ORTHO05D009390 3.8e-15 87.4 129 38.8
COL.COLO4_15481 Corchorus olitorius HOM05D007536 ORTHO05D009390 5.0e-15 87.0 123 38.2
CsaV3_1G045080 Cucumis sativus L. HOM05D007536 ORTHO05D009390 5.0e-15 87.0 126 36.5
vmacro10366 Vaccinium macrocarpon HOM05D007536 ORTHO05D009390 5.0e-15 87.0 145 36.6
Solyc04g010050.4 Solanum lycopersicum HOM05D007536 ORTHO05D009390 6.5e-15 86.7 126 38.1
Atru.chr2.985 Acer truncatum HOM05D007536 ORTHO05D009390 8.5e-15 86.3 126 35.7
Gohir.D13G172800 Gossypium hirsutum HOM05D007536 ORTHO05D009390 1.4e-14 85.5 129 35.7
Gorai.013G187800 Gossypium raimondii HOM05D007536 ORTHO05D009390 1.4e-14 85.5 129 35.7
Potri.019G019200 Populus trichocarpa HOM05D007536 ORTHO05D009390 1.4e-14 85.5 126 35.7
Nitab4.5_0006737g0040 Nicotiana tabacum HOM05D007536 ORTHO05D009390 1.9e-14 85.1 122 35.2
RcHm_v2.0_Chr3g0449641 Rosa chinensis HOM05D007536 ORTHO05D009390 4.2e-14 84.0 130 35.4
TWI38G0843 Tripterygium wilfordii HOM05D007536 ORTHO05D009390 4.2e-14 84.0 126 37.3
Ah.04g163100 Amaranthus hybridus HOM05D007536 ORTHO05D009390 5.5e-14 83.6 60 58.3
Gohir.A11G247400 Gossypium hirsutum HOM05D007536 ORTHO05D009390 5.5e-14 83.6 130 33.8
Actinidia34755 Actinidia chinensis HOM05D007536 ORTHO05D009390 7.2e-14 83.2 77 51.9
AUR62040928 Chenopodium quinoa HOM05D007536 ORTHO05D009390 9.4e-14 82.8 73 53.4
Sabra19G0031900 Salix brachista HOM05D007536 ORTHO05D009390 9.4e-14 82.8 106 39.6
Phvul.008G151830 Phaseolus vulgaris HOM05D007536 ORTHO05D009390 1.2e-13 82.4 109 43.1
MSTRG.10543 Avicennia marina HOM05D007536 ORTHO05D009390 1.6e-13 82.0 122 32.8
Glyma.20G222900 Glycine max HOM05D007536 ORTHO05D009390 3.6e-13 80.9 109 42.2
Migut.L01514 Erythranthe guttata HOM05D007536 ORTHO05D009390 4.6e-13 80.5 149 32.2
Carub.0001s0797 Capsella rubella HOM05D007536 ORTHO05D009390 6.1e-13 80.1 151 33.1
Rhsim09G0137000 Rhododendron simsii HOM05D007536 ORTHO05D009390 6.1e-13 80.1 121 38.0
C08p49910 Brassica napus HOM05D007536 ORTHO05D009390 7.9e-13 79.7 66 48.5
Lalb_Chr21g0311181 Lupinus albus HOM05D007536 ORTHO05D009390 7.9e-13 79.7 110 35.5
Aa31LG11G11200 Aethionema arabicum HOM05D007536 ORTHO05D009390 1.0e-12 79.3 60 55.0
SalBow1G3025 Salvia bowleyana HOM05D007536 ORTHO05D009390 1.4e-12 79.0 56 58.9
AT1G08610 Arabidopsis thaliana HOM05D007536 ORTHO05D009390 1.8e-12 78.6 128 35.2
BraA09t41926Z Brassica rapa HOM05D007536 ORTHO05D009390 1.8e-12 78.6 67 49.3
VMungo0720G1101 Vigna mungo HOM05D007536 ORTHO05D009390 1.8e-12 78.6 114 40.4
BcaC07g41933 Brassica carinata HOM05D007536 ORTHO05D009390 2.3e-12 78.2 66 47.0
BolC8t52519H Brassica oleracea HOM05D007536 ORTHO05D009390 2.3e-12 78.2 66 47.0
Duzib177G0261 Durio zibethinus HOM05D007536 ORTHO05D009390 2.3e-12 78.2 126 33.3
THA.LOC104821264 Tarenaya hassleriana HOM05D007536 ORTHO05D009390 2.3e-12 78.2 147 34.0
CANSAT54G0748 Cannabis sativa HOM05D007536 ORTHO05D009390 3.0e-12 77.8 154 33.8
COL.COLO4_15479 Corchorus olitorius HOM05D007536 ORTHO05D009390 3.0e-12 77.8 124 36.3
CAN.G358.142 Capsicum annuum HOM05D007536 ORTHO05D009390 5.1e-12 77.0 136 31.6
CARHR008520 Cardamine hirsuta HOM05D007536 ORTHO05D009390 5.1e-12 77.0 134 34.3
A09p65820 Brassica napus HOM05D007536 ORTHO05D009390 8.8e-12 76.3 67 47.8
DCAR_023085 Daucus carota HOM05D007536 ORTHO05D009390 2.0e-11 75.1 132 35.6
FAN02G3965 Fragaria x ananassa HOM05D007536 ORTHO05D009390 3.3e-11 74.3 63 52.4
Thhalv10007213m.g Eutrema salsugineum HOM05D007536 ORTHO05D009390 4.4e-11 73.9 63 47.6
TPR.G22324 Trifolium pratense HOM05D007536 ORTHO05D009390 4.4e-11 73.9 105 41.0
Medtr1g080120 Medicago truncatula HOM05D007536 ORTHO05D009390 7.4e-11 73.2 63 52.4
Lj5g0027095 Lotus japonicus HOM05D007536 ORTHO05D009390 1.3e-10 72.4 110 36.4
Ca_10014_v3 Cicer arietinum L. HOM05D007536 ORTHO05D009390 2.2e-10 71.6 70 50.0
Eucgr.B02149 Eucalyptus grandis HOM05D007536 ORTHO05D009390 2.8e-10 71.2 77 45.5
PGR142G0030 Punica granatum HOM05D007536 ORTHO05D009390 2.8e-10 71.2 120 35.0
AL1G19040 Arabidopsis lyrata HOM05D007536 ORTHO05D009390 3.7e-10 70.9 60 48.3
PSO832G0816 Papaver somniferum HOM05D007536 ORTHO05D009390 1.2e-08 65.9 32 100.0
ECA233G3269 Erigeron canadensis HOM05D007536 ORTHO05D009390 2.0e-08 65.1 147 28.6
Lsat_1_v5_gn_8_24901 Lactuca sativa HOM05D007536 ORTHO05D009390 5.9e-08 63.5 53 45.3
HanXRQChr07g0204491 Helianthus annuus HOM05D007536 ORTHO05D009390 1.7e-07 62.0 53 47.2
Psat6g142640 Pisum sativum HOM05D007536 ORTHO05D009390 2.2e-07 61.6 113 32.7


User provided reference genes

Program Settings