Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO210G0096 Papaver somniferum HOM05D005155 ORTHO05D006266 3.6e-164 581.6 323 100.0
PSO782G4695 Papaver somniferum HOM05D005155 ORTHO05D006266 3.5e-151 538.5 323 90.7
PSO782G5585 Papaver somniferum HOM05D005155 ORTHO05D006266 6.1e-95 351.7 299 69.6
Dinv21322 Davidia involucrata HOM05D005155 ORTHO05D006266 9.8e-69 264.6 330 51.2
Rhsim04G0007200 Rhododendron simsii HOM05D005155 ORTHO05D006266 1.2e-66 257.7 331 52.9
CSS0035525 Camellia sinensis var. sinensis HOM05D005155 ORTHO05D006266 3.5e-66 256.1 317 53.0
Actinidia20603 Actinidia chinensis HOM05D005155 ORTHO05D006266 7.8e-66 255.0 316 53.5
Glyma.19G235800 Glycine max HOM05D005155 ORTHO05D006266 1.3e-65 254.2 330 50.6
Potri.014G170500 Populus trichocarpa HOM05D005155 ORTHO05D006266 6.6e-65 251.9 327 48.0
Prupe.3G194600 Prunus persica HOM05D005155 ORTHO05D006266 1.5e-64 250.8 336 50.3
PSO782G0752 Papaver somniferum HOM05D005155 ORTHO05D006266 3.3e-64 249.6 230 70.9
Actinidia20617 Actinidia chinensis HOM05D005155 ORTHO05D006266 9.5e-64 248.1 294 54.4
Phvul.006G092400 Phaseolus vulgaris HOM05D005155 ORTHO05D006266 9.5e-64 248.1 330 48.5
CsaV3_7G002370 Cucumis sativus L. HOM05D005155 ORTHO05D006266 1.2e-63 247.7 318 51.6
Hma1.2p1_0629F.1_g192150 Hydrangea macrophylla HOM05D005155 ORTHO05D006266 1.2e-63 247.7 335 50.1
Nitab4.5_0004941g0060 Nicotiana tabacum HOM05D005155 ORTHO05D006266 1.2e-63 247.7 323 52.9
Actinidia24711 Actinidia chinensis HOM05D005155 ORTHO05D006266 1.6e-63 247.3 295 51.2
Ciclev10015959m.g Citrus clementina HOM05D005155 ORTHO05D006266 6.2e-63 245.4 333 50.2
Dinv05324 Davidia involucrata HOM05D005155 ORTHO05D006266 8.1e-63 245.0 312 52.2
Glyma.03G238300 Glycine max HOM05D005155 ORTHO05D006266 1.1e-62 244.6 327 48.6
PGR044G0745 Punica granatum HOM05D005155 ORTHO05D006266 1.1e-62 244.6 319 49.2
GSVIVG01030126001 Vitis vinifera HOM05D005155 ORTHO05D006266 1.1e-62 244.6 281 53.7
Aqoxy3G04181 Aquilegia oxysepala HOM05D005155 ORTHO05D006266 1.8e-62 243.8 328 52.4
Sed0007088 Sechium edule HOM05D005155 ORTHO05D006266 3.1e-62 243.0 328 48.5
Haze_24928 Corylus avellana HOM05D005155 ORTHO05D006266 1.2e-61 241.1 338 50.3
MELO3C024180.2 Cucumis melo HOM05D005155 ORTHO05D006266 1.5e-61 240.7 317 49.2
Gohir.D11G154600 Gossypium hirsutum HOM05D005155 ORTHO05D006266 2.0e-61 240.4 330 49.7
ClCG02G003040 Citrullus lanatus HOM05D005155 ORTHO05D006266 2.6e-61 240.0 318 50.3
Cpa.g.sc136.55 Carica papaya HOM05D005155 ORTHO05D006266 3.4e-61 239.6 318 48.7
Nitab4.5_0003086g0050 Nicotiana tabacum HOM05D005155 ORTHO05D006266 7.5e-61 238.4 325 48.9
DCAR_021083 Daucus carota HOM05D005155 ORTHO05D006266 1.7e-60 237.3 329 51.4
Gorai.007G164700 Gossypium raimondii HOM05D005155 ORTHO05D006266 2.2e-60 236.9 330 48.8
Manes.13G059900 Manihot esculenta HOM05D005155 ORTHO05D006266 2.9e-60 236.5 328 47.3
Gohir.D07G170200 Gossypium hirsutum HOM05D005155 ORTHO05D006266 4.9e-60 235.7 315 48.6
MBI04_g26115_MAGBIO Magnolia biondii HOM05D005155 ORTHO05D006266 4.9e-60 235.7 344 46.5
VMungo0540G1824 Vigna mungo HOM05D005155 ORTHO05D006266 6.4e-60 235.3 332 50.0
Duzib211G0098 Durio zibethinus HOM05D005155 ORTHO05D006266 8.3e-60 235.0 315 49.5
Sc20g0004590 Simmondsia chinensis HOM05D005155 ORTHO05D006266 1.1e-59 234.6 326 48.2
Atru.chr6.3431 Acer truncatum HOM05D005155 ORTHO05D006266 1.4e-59 234.2 313 48.6
Gorai.001G190100 Gossypium raimondii HOM05D005155 ORTHO05D006266 1.4e-59 234.2 315 48.6
Eucgr.K01388 Eucalyptus grandis HOM05D005155 ORTHO05D006266 1.9e-59 233.8 331 50.2
Lj4g0024217 Lotus japonicus HOM05D005155 ORTHO05D006266 4.1e-59 232.6 337 44.2
TWI75G0909 Tripterygium wilfordii HOM05D005155 ORTHO05D006266 5.4e-59 232.3 319 48.0
Ah.08g210400 Amaranthus hybridus HOM05D005155 ORTHO05D006266 9.2e-59 231.5 274 51.5
Thecc.01G199500 Theobroma cacao HOM05D005155 ORTHO05D006266 2.7e-58 229.9 327 46.2
Cfa014201 Carpinus fangiana HOM05D005155 ORTHO05D006266 3.5e-58 229.6 338 48.5
Gohir.A07G163100 Gossypium hirsutum HOM05D005155 ORTHO05D006266 3.5e-58 229.6 311 46.6
TAR629G2368 Trochodendron aralioides HOM05D005155 ORTHO05D006266 3.5e-58 229.6 332 46.7
CSS0023894 Camellia sinensis var. sinensis HOM05D005155 ORTHO05D006266 4.6e-58 229.2 330 49.4
THA.LOC104802634 Tarenaya hassleriana HOM05D005155 ORTHO05D006266 6.0e-58 228.8 295 49.5
TPR.G3861 Trifolium pratense HOM05D005155 ORTHO05D006266 3.0e-57 226.5 332 45.8
CiPaw.04G197900 Carya illinoinensis HOM05D005155 ORTHO05D006266 3.9e-57 226.1 334 45.8
Ah.08g219720 Amaranthus hybridus HOM05D005155 ORTHO05D006266 1.9e-56 223.8 273 50.2
CANSAT64G2107 Cannabis sativa HOM05D005155 ORTHO05D006266 9.5e-56 221.5 318 49.1
Duzib138G0133 Durio zibethinus HOM05D005155 ORTHO05D006266 9.5e-56 221.5 291 51.2
Oeu022053.1 Olea europaea HOM05D005155 ORTHO05D006266 9.5e-56 221.5 315 46.3
Psat7g043480 Pisum sativum HOM05D005155 ORTHO05D006266 2.1e-55 220.3 327 44.6
Lalb_Chr21g0315451 Lupinus albus HOM05D005155 ORTHO05D006266 2.8e-55 219.9 333 44.7
Carub.0008s0781 Capsella rubella HOM05D005155 ORTHO05D006266 1.1e-54 218.0 310 46.8
Thhalv10004636m.g Eutrema salsugineum HOM05D005155 ORTHO05D006266 2.4e-54 216.9 311 45.7
PGSC0003DMG400004112 Solanum tuberosum HOM05D005155 ORTHO05D006266 5.2e-54 215.7 347 44.1
AL8G20970 Arabidopsis lyrata HOM05D005155 ORTHO05D006266 6.8e-54 215.3 307 44.6
Sopen05g001730 Solanum pennellii HOM05D005155 ORTHO05D006266 6.8e-54 215.3 327 46.5
Solyc05g005730.4 Solanum lycopersicum HOM05D005155 ORTHO05D006266 2.6e-53 213.4 333 45.0
HPP92_009941 Vanilla planifolia HOM05D005155 ORTHO05D006266 2.6e-53 213.4 336 44.0
AT5G48240 Arabidopsis thaliana HOM05D005155 ORTHO05D006266 1.7e-52 210.7 307 47.9
MD09G1131700 Malus domestica HOM05D005155 ORTHO05D006266 2.2e-52 210.3 326 46.3
AUR62030994 Chenopodium quinoa HOM05D005155 ORTHO05D006266 2.9e-52 209.9 248 50.4
Haze_12586 Corylus avellana HOM05D005155 ORTHO05D006266 2.9e-52 209.9 218 57.3
arahy.Tifrunner.gnm1.ann1.ZBS9GV Arachis hypogaea HOM05D005155 ORTHO05D006266 4.9e-52 209.1 318 47.2
Peaxi162Scf00359g00214 Petunia axillaris HOM05D005155 ORTHO05D006266 1.1e-51 208.0 321 46.7
arahy.Tifrunner.gnm1.ann1.FV1RU3 Arachis hypogaea HOM05D005155 ORTHO05D006266 2.4e-51 206.8 318 46.9
A09p04360 Brassica napus HOM05D005155 ORTHO05D006266 2.4e-51 206.8 312 45.5
Sp2g18610 Schrenkiella parvula HOM05D005155 ORTHO05D006266 3.2e-51 206.5 323 43.7
C09p04670 Brassica napus HOM05D005155 ORTHO05D006266 1.2e-50 204.5 312 45.5
COL.COLO4_19654 Corchorus olitorius HOM05D005155 ORTHO05D006266 1.2e-50 204.5 169 66.9
Nn3g19477 Nelumbo nucifera HOM05D005155 ORTHO05D006266 2.1e-50 203.8 289 45.7
THA.LOC104819027 Tarenaya hassleriana HOM05D005155 ORTHO05D006266 2.1e-50 203.8 310 43.5
CAN.G1447.4 Capsicum annuum HOM05D005155 ORTHO05D006266 6.0e-50 202.2 337 42.7
TPR.G35685 Trifolium pratense HOM05D005155 ORTHO05D006266 1.0e-49 201.4 355 42.3
unitig_26.g9470 Utricularia gibba HOM05D003767 ORTHO05D004507 1.3e-49 201.1 273 46.9
EL10Ac5g10791 Beta vulgaris HOM05D005155 ORTHO05D006266 1.7e-49 200.7 297 47.5
Aa31LG4G7530 Aethionema arabicum HOM05D005155 ORTHO05D006266 2.3e-49 200.3 323 41.8
Migut.M00065 Erythranthe guttata HOM05D005155 ORTHO05D006266 3.0e-49 199.9 336 44.6
FAN02G4414 Fragaria x ananassa HOM05D005155 ORTHO05D006266 3.0e-49 199.9 330 44.5
Cc02_g33980 Coffea canephora HOM05D005155 ORTHO05D006266 3.9e-49 199.5 285 46.3
FAN05G3842 Fragaria x ananassa HOM05D005155 ORTHO05D006266 5.1e-49 199.1 330 43.9
FAN09G4460 Fragaria x ananassa HOM05D005155 ORTHO05D006266 8.7e-49 198.4 330 43.0
CAN.G715.5 Capsicum annuum HOM05D005155 ORTHO05D006266 1.5e-48 197.6 283 46.3
C07p38970 Brassica napus HOM05D005155 ORTHO05D006266 1.9e-48 197.2 313 43.5
A06p39310 Brassica napus HOM05D005155 ORTHO05D006266 3.3e-48 196.4 224 51.8
CDE09G0959 Ceratophyllum demersum HOM05D005155 ORTHO05D006266 3.3e-48 196.4 274 44.9
BolC9t53395H Brassica oleracea HOM05D005155 ORTHO05D006266 2.8e-47 193.4 342 41.5
SGA_v2.0_scaffold181G39700 Striga asiatica HOM05D005155 ORTHO05D006266 2.8e-47 193.4 374 39.0
HanXRQChr01g0006811 Helianthus annuus HOM05D005155 ORTHO05D006266 8.1e-47 191.8 318 45.6
BcaB04g19566 Brassica carinata HOM05D005155 ORTHO05D006266 1.4e-46 191.0 327 42.2
BraA09t36073Z Brassica rapa HOM05D005155 ORTHO05D006266 1.4e-46 191.0 347 40.6
CARHR286520 Cardamine hirsuta HOM05D005155 ORTHO05D006266 1.8e-46 190.7 313 46.0
CARHR218550 Cardamine hirsuta HOM05D005155 ORTHO05D006266 4.0e-46 189.5 277 48.0
Lsat_1_v5_gn_0_13881 Lactuca sativa HOM05D005155 ORTHO05D006266 4.0e-46 189.5 280 48.2
BcaC04g23785 Brassica carinata HOM05D005155 ORTHO05D006266 6.9e-46 188.7 314 43.6
FvH4_6g40390 Fragaria vesca HOM05D005155 ORTHO05D006266 2.0e-45 187.2 330 40.3
Os11g0266000 Oryza sativa ssp. japonica HOM05D005155 ORTHO05D006266 1.3e-44 184.5 201 49.3
RcHm_v2.0_Chr2g0155591 Rosa chinensis HOM05D005155 ORTHO05D006266 1.3e-44 184.5 329 40.1
Nn1g02050 Nelumbo nucifera HOM05D005155 ORTHO05D006266 6.4e-44 182.2 306 42.5
BraA06t26845Z Brassica rapa HOM05D005155 ORTHO05D006266 1.1e-43 181.4 263 43.7
BcaC06g30816 Brassica carinata HOM05D005155 ORTHO05D006266 4.2e-43 179.5 222 50.5
Zm00001eb298370 Zea mays HOM05D005155 ORTHO05D006266 4.2e-43 179.5 201 52.2
Gohir.A11G147700 Gossypium hirsutum HOM05D005155 ORTHO05D006266 2.7e-42 176.8 306 43.8
Psat5g216800 Pisum sativum HOM05D005155 ORTHO05D006266 7.8e-42 175.3 266 46.6
Ca_02017_v3 Cicer arietinum L. HOM05D005155 ORTHO05D006266 2.3e-41 173.7 309 42.4
SalBow7G0407 Salvia bowleyana HOM05D005155 ORTHO05D006266 2.3e-41 173.7 331 44.1
MSTRG.6620 Avicennia marina HOM05D005155 ORTHO05D006266 1.9e-40 170.6 229 50.2
ATR0225G032 Amborella trichopoda HOM05D005155 ORTHO05D006266 2.1e-39 167.2 329 37.1
MD17G1119200 Malus domestica HOM05D005155 ORTHO05D006266 1.8e-38 164.1 253 44.7
ECA248G0062 Erigeron canadensis HOM05D005155 ORTHO05D006266 2.4e-38 163.7 362 39.0
FAN14G3535 Fragaria x ananassa HOM05D005155 ORTHO05D006266 2.4e-38 163.7 353 36.3
SEGI_31719 Sequoiadendron giganteum HOM05D005155 ORTHO05D006266 7.6e-37 158.7 209 47.4
BolC7t44418H Brassica oleracea HOM05D005155 ORTHO05D006266 8.4e-36 155.2 199 50.8
QL04p067008 Quercus lobata HOM05D005155 ORTHO05D006266 9.3e-35 151.8 507 31.6
Lj1A800T38 Lonicera japonica HOM05D005155 ORTHO05D006266 4.8e-31 139.4 320 37.8
Cc00_g18660 Coffea canephora HOM05D005155 ORTHO05D006266 3.4e-29 133.3 123 60.2
Cc00_g14350 Coffea canephora HOM05D005155 ORTHO05D006266 1.3e-28 131.3 113 61.9
CiPaw.03G283900 Carya illinoinensis HOM05D005155 ORTHO05D006266 2.9e-28 130.2 340 34.4
AUR62008242 Chenopodium quinoa HOM05D005155 ORTHO05D006266 6.0e-26 122.5 198 39.9
Cc07_g20190 Coffea canephora HOM05D005155 ORTHO05D006266 5.1e-25 119.4 108 59.3
Nn1g02049 Nelumbo nucifera HOM05D005155 ORTHO05D006266 5.1e-25 119.4 179 46.9
AagrBONN_evm.TU.Sc2ySwM_368.2873 Anthoceros agrestis HOM05D005155 ORTHO05D006266 6.2e-23 112.5 200 37.5
QL01p014609 Quercus lobata HOM05D005155 ORTHO05D006266 1.0e-17 95.1 115 47.8
Mapoly0148s0006 Marchantia polymorpha HOM05D005155 ORTHO05D006266 3.9e-17 93.2 212 34.9
Hma1.2p1_1388F.1_g279940 Hydrangea macrophylla HOM05D005155 ORTHO05D006266 1.1e-16 91.7 66 69.7
Pp3c22_320 Physcomitrium patens HOM05D005155 ORTHO05D006266 4.8e-15 86.3 188 34.0
Pp3c22_322 Physcomitrium patens HOM05D005155 ORTHO05D006266 4.8e-15 86.3 188 34.0
CBR_g23113 Chara braunii HOM05D005155 ORTHO05D006266 2.2e-12 77.4 196 30.6
Cc07_g20180 Coffea canephora HOM05D005155 ORTHO05D006266 5.0e-12 76.3 104 45.2
MD17G1119400 Malus domestica HOM05D005155 ORTHO05D006266 3.0e-09 67.0 74 48.6
QL03p064628 Quercus lobata HOM05D005155 ORTHO05D006266 5.1e-09 66.2 324 29.3
PRCOL_00000835 Prasinoderma coloniale HOM05D005155 ORTHO05D006266 1.3e-07 61.6 175 36.0
Lj1A800T39 Lonicera japonica HOM05D005155 ORTHO05D006266 6.3e-07 59.3 53 60.4
Cc00_g29960 Coffea canephora HOM05D005155 ORTHO05D006266 1.4e-06 58.2 88 44.3


User provided reference genes

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