Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO210G0029 Papaver somniferum HOM05D005370 ORTHO05D006659 9.6e-122 440.3 238 100.0
PSO238G0055 Papaver somniferum HOM05D005370 ORTHO05D006659 6.0e-116 421.0 238 95.0
Sabra02G0036500 Salix brachista HOM05D005370 ORTHO05D006659 7.5e-66 254.6 248 61.3
Potri.002G045500 Populus trichocarpa HOM05D005370 ORTHO05D006659 1.7e-65 253.4 246 60.2
Prupe.1G175900 Prunus persica HOM05D005370 ORTHO05D006659 5.0e-62 241.9 241 57.7
MBI15_g19756_MAGBIO Magnolia biondii HOM05D005370 ORTHO05D006659 6.6e-62 241.5 243 59.7
QL06p015215 Quercus lobata HOM05D005370 ORTHO05D006659 2.1e-60 236.5 245 55.9
Aqoxy3G04193 Aquilegia oxysepala HOM05D005370 ORTHO05D006659 3.6e-60 235.7 241 57.7
Manes.01G202000 Manihot esculenta HOM05D005370 ORTHO05D006659 6.1e-60 235.0 242 57.4
GSVIVG01018102001 Vitis vinifera HOM05D005370 ORTHO05D006659 1.4e-59 233.8 243 56.8
TWI18G0973 Tripterygium wilfordii HOM05D005370 ORTHO05D006659 4.0e-59 232.3 242 55.0
CSS0021022 Camellia sinensis var. sinensis HOM05D005370 ORTHO05D006659 1.2e-58 230.7 242 57.9
CiPaw.02G117200 Carya illinoinensis HOM05D005370 ORTHO05D006659 1.5e-58 230.3 245 54.7
CANSAT11G0223 Cannabis sativa HOM05D005370 ORTHO05D006659 5.8e-58 228.4 246 53.7
AUR62032263 Chenopodium quinoa HOM05D005370 ORTHO05D006659 5.8e-58 228.4 248 54.0
TWI12G0023 Tripterygium wilfordii HOM05D005370 ORTHO05D006659 5.8e-58 228.4 242 55.0
Cfa018256 Carpinus fangiana HOM05D005370 ORTHO05D006659 7.5e-58 228.0 259 54.1
ECA236G0510 Erigeron canadensis HOM05D005370 ORTHO05D006659 7.5e-58 228.0 239 55.2
Nn3g19501 Nelumbo nucifera HOM05D005370 ORTHO05D006659 9.8e-58 227.6 238 55.0
RcHm_v2.0_Chr4g0389631 Rosa chinensis HOM05D005370 ORTHO05D006659 2.2e-57 226.5 244 54.9
Ca_14753_v3 Cicer arietinum L. HOM05D005370 ORTHO05D006659 2.9e-57 226.1 244 54.1
Thecc.04G244800 Theobroma cacao HOM05D005370 ORTHO05D006659 2.9e-57 226.1 241 56.4
Gorai.005G046600 Gossypium raimondii HOM05D005370 ORTHO05D006659 3.7e-57 225.7 241 55.2
Ca_24537_v3 Cicer arietinum L. HOM05D005370 ORTHO05D006659 4.9e-57 225.3 244 54.1
COL.COLO4_15774 Corchorus olitorius HOM05D005370 ORTHO05D006659 4.9e-57 225.3 241 54.4
Sopen04g034560 Solanum pennellii HOM05D005370 ORTHO05D006659 4.9e-57 225.3 258 53.9
FAN17G2982 Fragaria x ananassa HOM05D005370 ORTHO05D006659 6.4e-57 224.9 242 53.7
FAN22G1699 Fragaria x ananassa HOM05D005370 ORTHO05D006659 6.4e-57 224.9 242 53.7
Ciclev10006717m.g Citrus clementina HOM05D005370 ORTHO05D006659 8.3e-57 224.6 242 55.4
HanXRQChr02g0032381 Helianthus annuus HOM05D005370 ORTHO05D006659 8.3e-57 224.6 241 56.8
Lsat_1_v5_gn_8_94841 Lactuca sativa HOM05D005370 ORTHO05D006659 1.4e-56 223.8 244 56.6
TAR362G0430 Trochodendron aralioides HOM05D005370 ORTHO05D006659 1.9e-56 223.4 233 56.2
Gohir.A02G035301 Gossypium hirsutum HOM05D005370 ORTHO05D006659 2.4e-56 223.0 241 54.4
Gohir.D02G042266 Gossypium hirsutum HOM05D005370 ORTHO05D006659 2.4e-56 223.0 241 54.8
CANSAT11G2293 Cannabis sativa HOM05D005370 ORTHO05D006659 3.2e-56 222.6 246 52.4
EL10Ac5g10469 Beta vulgaris HOM05D005370 ORTHO05D006659 4.1e-56 222.2 250 53.6
FvH4_4g02310 Fragaria vesca HOM05D005370 ORTHO05D006659 5.4e-56 221.9 238 53.4
Lj5g0014373 Lotus japonicus HOM05D005370 ORTHO05D006659 7.0e-56 221.5 238 54.6
Solyc04g080950.3 Solanum lycopersicum HOM05D005370 ORTHO05D006659 7.0e-56 221.5 256 53.9
Lalb_Chr02g0142451 Lupinus albus HOM05D005370 ORTHO05D006659 9.2e-56 221.1 243 55.6
AUR62011949 Chenopodium quinoa HOM05D005370 ORTHO05D006659 1.2e-55 220.7 250 52.8
VMungo0720G0865 Vigna mungo HOM05D005370 ORTHO05D006659 1.2e-55 220.7 240 53.3
Migut.D00369 Erythranthe guttata HOM05D005370 ORTHO05D006659 3.5e-55 219.2 239 54.4
Phvul.007G177000 Phaseolus vulgaris HOM05D005370 ORTHO05D006659 4.6e-55 218.8 241 51.9
Cc01_g08030 Coffea canephora HOM05D005370 ORTHO05D006659 2.3e-54 216.5 239 55.2
MELO3C005475.2 Cucumis melo HOM05D005370 ORTHO05D006659 2.3e-54 216.5 248 54.4
CsaV3_5G004690 Cucumis sativus L. HOM05D005370 ORTHO05D006659 1.1e-53 214.2 248 54.4
SalBow4G0733 Salvia bowleyana HOM05D005370 ORTHO05D006659 3.3e-53 212.6 242 52.1
PGSC0003DMG400003760 Solanum tuberosum HOM05D005370 ORTHO05D006659 4.3e-53 212.2 248 52.4
SGA_v2.0_scaffold3169G54286 Striga asiatica HOM05D005370 ORTHO05D006659 4.3e-53 212.2 257 51.8
Medtr1g070900 Medicago truncatula HOM05D005370 ORTHO05D006659 7.3e-53 211.5 241 53.1
DCAR_023471 Daucus carota HOM05D005370 ORTHO05D006659 9.5e-53 211.1 237 50.6
Peaxi162Scf00434g00622 Petunia axillaris HOM05D005370 ORTHO05D006659 1.2e-52 210.7 243 53.1
Ah.11g050020 Amaranthus hybridus HOM05D005370 ORTHO05D006659 1.6e-52 210.3 248 52.8
SGA_v2.0_scaffold580G53040 Striga asiatica HOM05D005370 ORTHO05D006659 1.6e-52 210.3 248 52.8
Sed0023556 Sechium edule HOM05D005370 ORTHO05D006659 4.7e-52 208.8 244 52.0
FAN12G2588 Fragaria x ananassa HOM05D005370 ORTHO05D006659 8.0e-52 208.0 227 52.4
Duzib052G0322 Durio zibethinus HOM05D005370 ORTHO05D006659 1.8e-51 206.8 294 45.9
Nn1g02548 Nelumbo nucifera HOM05D005370 ORTHO05D000069 2.0e-50 203.4 209 59.3
ATR0665G285 Amborella trichopoda HOM05D005370 ORTHO05D006659 3.7e-49 199.1 243 51.0
DCAR_028371 Daucus carota HOM05D005370 ORTHO05D006659 3.7e-49 199.1 237 48.9
HPP92_015262 Vanilla planifolia HOM05D005370 ORTHO05D006659 3.7e-49 199.1 242 49.2
CAN.G851.23 Capsicum annuum HOM05D005370 ORTHO05D006659 1.1e-48 197.6 261 49.4
Haze_11274 Corylus avellana HOM05D005370 ORTHO05D006659 1.4e-48 197.2 221 54.3
Prupe.2G050700 Prunus persica HOM05D005370 ORTHO05D006659 3.2e-48 196.1 242 48.3
MD04G1026200 Malus domestica HOM05D005370 ORTHO05D006659 4.1e-48 195.7 210 52.9
Sc24g0004270 Simmondsia chinensis HOM05D005370 ORTHO05D006659 7.0e-48 194.9 218 50.9
Glyma.10G031500 Glycine max HOM05D005370 ORTHO05D006659 2.7e-47 193.0 242 49.6
Dinv22486 Davidia involucrata HOM05D005370 ORTHO05D006659 2.3e-46 189.9 207 55.1
arahy.Tifrunner.gnm1.ann1.XNPI4G Arachis hypogaea HOM05D005370 ORTHO05D006659 3.9e-46 189.1 244 50.4
Oeu025788.2 Olea europaea HOM05D005370 ORTHO05D006659 8.6e-46 188.0 210 54.8
arahy.Tifrunner.gnm1.ann1.T9F7M4 Arachis hypogaea HOM05D005370 ORTHO05D006659 7.3e-45 184.9 221 53.8
CDE07G1268 Ceratophyllum demersum HOM05D005370 ORTHO05D006659 2.8e-44 183.0 241 49.0
Thhalv10017901m.g Eutrema salsugineum HOM05D005370 ORTHO05D006659 1.1e-43 181.0 238 46.6
arahy.Tifrunner.gnm1.ann1.7J2YFM Arachis hypogaea HOM05D005370 ORTHO05D006659 5.2e-43 178.7 242 49.2
Actinidia27521 Actinidia chinensis HOM05D005370 ORTHO05D006659 1.2e-42 177.6 250 48.4
ClCG01G004480 Citrullus lanatus HOM05D005370 ORTHO05D006659 1.2e-42 177.6 229 50.7
Cpa.g.sc58.39 Carica papaya HOM05D005370 ORTHO05D006659 3.4e-42 176.0 207 51.2
CARHR179930 Cardamine hirsuta HOM05D005370 ORTHO05D006659 9.9e-42 174.5 238 45.4
TPR.G39035 Trifolium pratense HOM05D005370 ORTHO05D000069 4.9e-41 172.2 211 50.7
BraA06t27643Z Brassica rapa HOM05D005370 ORTHO05D006659 3.2e-40 169.5 243 44.9
Hund02875 Selenicereus undatus HOM05D005370 ORTHO05D006659 3.2e-40 169.5 236 45.3
Sp2g08480 Schrenkiella parvula HOM05D005370 ORTHO05D006659 4.1e-40 169.1 237 45.1
BcaC06g31683 Brassica carinata HOM05D005370 ORTHO05D006659 9.2e-40 167.9 239 46.0
A06p47750 Brassica napus HOM05D005370 ORTHO05D006659 1.2e-39 167.5 239 44.8
BcaC06g34636 Brassica carinata HOM05D005370 ORTHO05D006659 2.7e-39 166.4 237 45.6
C07p26250 Brassica napus HOM05D005370 ORTHO05D006659 2.7e-39 166.4 237 45.6
BolC7t43153H Brassica oleracea HOM05D005370 ORTHO05D006659 2.7e-39 166.4 237 45.6
AL8G16570 Arabidopsis lyrata HOM05D005370 ORTHO05D006659 1.0e-38 164.5 240 43.8
Psat3g119240 Pisum sativum HOM05D005370 ORTHO05D006659 2.3e-38 163.3 229 47.2
Prupe.1G027700 Prunus persica HOM05D005370 ORTHO05D006659 3.0e-38 162.9 189 53.4
Haze_21184 Corylus avellana HOM05D005370 ORTHO05D006659 5.1e-38 162.2 302 39.4
AT5G43680 Arabidopsis thaliana HOM05D005370 ORTHO05D006659 1.1e-37 161.0 237 43.5
Carub.0008s0497 Capsella rubella HOM05D005370 ORTHO05D006659 9.5e-37 157.9 237 42.6
MSTRG.18281 Avicennia marina HOM05D005370 ORTHO05D006659 2.8e-36 156.4 141 58.9
Psat5g092160 Pisum sativum HOM05D009633 ORTHO05D011907 6.2e-36 155.2 115 65.2
SGA_v2.0_scaffold138G35287 Striga asiatica HOM05D005370 ORTHO05D006659 3.1e-35 152.9 105 72.4
Nitab4.5_0001840g0120 Nicotiana tabacum HOM05D005370 ORTHO05D006659 4.0e-35 152.5 126 64.3
Nitab4.5_0002156g0030 Nicotiana tabacum HOM05D005370 ORTHO05D006659 6.8e-35 151.8 126 64.3
PGSC0003DMG400017885 Solanum tuberosum HOM05D005370 ORTHO05D006659 2.0e-34 150.2 128 65.6
Zm00001eb201750 Zea mays HOM05D005370 ORTHO05D006659 2.6e-34 149.8 268 40.3
Nitab4.5_0001903g0040 Nicotiana tabacum HOM05D005370 ORTHO05D006659 2.2e-33 146.7 96 71.9
Nitab4.5_0001423g0070 Nicotiana tabacum HOM05D005370 ORTHO05D006659 2.9e-33 146.4 272 41.2
Glyma.02G142900 Glycine max HOM05D005370 ORTHO05D006659 1.9e-32 143.7 103 70.9
CDE03G0266 Ceratophyllum demersum HOM05D005370 ORTHO05D006659 4.2e-32 142.5 203 45.3
Eucgr.G02606 Eucalyptus grandis HOM05D005370 ORTHO05D006659 7.8e-31 138.3 188 49.5
Mapoly0029s0143 Marchantia polymorpha HOM05D005370 ORTHO05D006659 1.1e-29 134.4 261 37.2
Aa31LG5G3560 Aethionema arabicum HOM05D005370 ORTHO05D006659 9.6e-29 131.3 234 39.3
Pp3c17_23420 Physcomitrium patens HOM05D005370 ORTHO05D006659 2.1e-28 130.2 241 40.2
Psat1g083920 Pisum sativum HOM05D005370 ORTHO05D006659 1.8e-27 127.1 174 44.8
SGA_v2.0_scaffold1G00551 Striga asiatica HOM05D006471 ORTHO05D008157 2.4e-27 126.7 95 66.3
Psat0s8363g0040 Pisum sativum HOM05D005370 ORTHO05D006659 4.0e-27 125.9 174 44.3
Os11g0550900 Oryza sativa ssp. japonica HOM05D005370 ORTHO05D006659 1.7e-25 120.6 246 35.4
Sopen01g042090 Solanum pennellii HOM05D005370 ORTHO05D006659 9.3e-24 114.8 174 46.6
CBR_g32014 Chara braunii HOM05D005370 ORTHO05D006659 6.0e-23 112.1 260 31.9
AagrBONN_evm.TU.Sc2ySwM_228.5248 Anthoceros agrestis HOM05D005370 ORTHO05D006659 2.3e-22 110.2 225 38.7
Nn8g40523 Nelumbo nucifera HOM05D005370 ORTHO05D006659 3.3e-21 106.3 100 56.0
MBI11_g15920_MAGBIO Magnolia biondii HOM05D005370 ORTHO05D006659 4.0e-19 99.4 146 47.3
Psat3g119160 Pisum sativum HOM05D005370 ORTHO05D006659 9.9e-18 94.7 163 39.3
SEGI_11901 Sequoiadendron giganteum HOM05D005370 ORTHO05D006659 2.2e-17 93.6 66 68.2
Nitab4.5_0004235g0010 Nicotiana tabacum HOM05D005370 ORTHO05D006659 9.3e-16 88.2 62 66.1
Duzib212G0616 Durio zibethinus HOM05D005370 ORTHO05D006659 2.7e-15 86.7 175 38.3
Cc01_g05510 Coffea canephora HOM05D005370 ORTHO05D006659 3.5e-15 86.3 62 69.4
Actinidia19979 Actinidia chinensis HOM05D005370 ORTHO05D006659 7.9e-15 85.1 92 55.4
Psat1g084080 Pisum sativum HOM05D005370 ORTHO05D006659 2.3e-14 83.6 139 41.0
Thhalv10003352m.g Eutrema salsugineum HOM05D005370 ORTHO05D006659 3.0e-14 83.2 184 36.4
Psat3g119360 Pisum sativum HOM05D005370 ORTHO05D006659 3.0e-14 83.2 53 71.7
MBI02_g40862_MAGBIO Magnolia biondii HOM05D005370 ORTHO05D006659 5.1e-14 82.4 157 42.0
MBI16_g44196_MAGBIO Magnolia biondii HOM05D005370 ORTHO05D006659 6.7e-14 82.0 157 41.4
MBI18_g19775_MAGBIO Magnolia biondii HOM05D005370 ORTHO05D006659 1.5e-13 80.9 172 39.0
MBI16_g45671_MAGBIO Magnolia biondii HOM05D005370 ORTHO05D006659 3.7e-12 76.3 187 37.4
Cc01_g05520 Coffea canephora HOM05D005370 ORTHO05D006659 1.5e-10 70.9 152 38.2
Solyc01g098540.3 Solanum lycopersicum HOM05D005370 ORTHO05D006659 7.6e-10 68.6 62 59.7
SEGI_21191 Sequoiadendron giganteum HOM05D005370 ORTHO05D006659 2.9e-09 66.6 95 51.6
SMO116G0410 Selaginella moellendorffii HOM05D005370 ORTHO05D006659 9.3e-08 61.6 229 27.5
SEGI_37606 Sequoiadendron giganteum HOM05D005370 ORTHO05D006659 1.3e-06 57.8 53 50.9
Os11g0551350 Oryza sativa ssp. japonica HOM05D005370 ORTHO05D006659 3.0e-06 56.6 61 44.3


User provided reference genes

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