Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO198G0032 Papaver somniferum HOM05D004787 ORTHO05D006972 4.7e-138 494.6 260 100.0
PSO407G0282 Papaver somniferum HOM05D004787 ORTHO05D006972 4.0e-89 332.0 222 82.0
PSO478G4874 Papaver somniferum HOM05D004787 ORTHO05D006972 1.2e-85 320.5 223 80.7
PSO063G3648 Papaver somniferum HOM05D004787 ORTHO05D006972 1.8e-84 316.6 230 74.8
PSO063G5300 Papaver somniferum HOM05D004787 ORTHO05D006972 5.1e-84 315.1 230 74.3
PSO063G1019 Papaver somniferum HOM05D004787 ORTHO05D006972 2.1e-77 293.1 220 75.0
PSO409G0034 Papaver somniferum HOM05D004787 ORTHO05D006972 9.7e-75 284.3 218 72.5
PSO063G0043 Papaver somniferum HOM05D004787 ORTHO05D006972 8.2e-74 281.2 208 75.5
PSO478G1956 Papaver somniferum HOM05D004787 ORTHO05D006972 1.1e-70 270.8 183 82.0
PSO063G4343 Papaver somniferum HOM05D004787 ORTHO05D304254 9.7e-59 231.1 128 91.4
PSO063G2684 Papaver somniferum HOM05D004787 ORTHO05D304724 1.7e-58 230.3 128 91.4
PSO063G0274 Papaver somniferum HOM05D004787 ORTHO05D006972 1.0e-55 221.1 159 76.1
PSO478G0028 Papaver somniferum HOM05D004787 ORTHO05D006972 1.1e-51 207.6 216 60.6
PSO409G0053 Papaver somniferum HOM05D004787 ORTHO05D006972 8.5e-47 191.4 218 53.7
PSO339G1514 Papaver somniferum HOM05D004787 ORTHO05D303367 3.3e-43 179.5 222 52.3
PSO339G2032 Papaver somniferum HOM05D004787 ORTHO05D006972 3.3e-43 179.5 222 51.8
PSO339G2591 Papaver somniferum HOM05D004787 ORTHO05D006972 4.8e-42 175.6 226 50.9
PSO478G2704 Papaver somniferum HOM05D004787 ORTHO05D303020 6.3e-42 175.3 111 82.9
PSO675G3772 Papaver somniferum HOM05D004787 ORTHO05D302583 2.6e-35 153.3 214 49.5
PSO675G1486 Papaver somniferum HOM05D004787 ORTHO05D006972 1.2e-32 144.4 203 46.3
MSTRG.15622 Avicennia marina HOM05D004787 ORTHO05D006972 2.3e-28 130.2 194 45.4
Glyma.18G045800 Glycine max HOM05D004787 ORTHO05D006972 8.9e-28 128.3 210 41.4
PSO384G4943 Papaver somniferum HOM05D004787 ORTHO05D303805 2.0e-27 127.1 80 86.2
Phvul.006G085100 Phaseolus vulgaris HOM05D004787 ORTHO05D006972 2.0e-27 127.1 210 41.0
Hma1.2p1_0034F.1_g021480 Hydrangea macrophylla HOM05D004787 ORTHO05D006972 7.5e-27 125.2 194 43.8
Lj6g0012338 Lotus japonicus HOM05D004787 ORTHO05D006972 7.5e-27 125.2 210 40.5
TAR629G0710 Trochodendron aralioides HOM05D004787 ORTHO05D006972 7.5e-27 125.2 208 43.3
Lalb_Chr18g0053891 Lupinus albus HOM05D004787 ORTHO05D006972 1.3e-26 124.4 210 40.5
TPR.G37333 Trifolium pratense HOM05D004787 ORTHO05D006972 1.3e-26 124.4 210 39.5
Cfa008000 Carpinus fangiana HOM05D004787 ORTHO05D006972 1.7e-26 124.0 210 41.4
PSO170G0972 Papaver somniferum HOM05D004787 ORTHO05D303930 1.7e-26 124.0 80 85.0
PGR004G1381 Punica granatum HOM05D004787 ORTHO05D006972 1.7e-26 124.0 210 40.5
HanXRQChr16g0532401 Helianthus annuus HOM05D004787 ORTHO05D006972 4.9e-26 122.5 211 41.2
Prupe.3G013000 Prunus persica HOM05D004787 ORTHO05D006972 4.9e-26 122.5 210 41.0
Aqoxy3G04198 Aquilegia oxysepala HOM05D004787 ORTHO05D006972 6.3e-26 122.1 210 42.4
arahy.Tifrunner.gnm1.ann1.0Y5IZW Arachis hypogaea HOM05D004787 ORTHO05D006972 6.3e-26 122.1 220 37.3
Duzib138G0253 Durio zibethinus HOM05D004787 ORTHO05D006972 6.3e-26 122.1 194 43.3
Actinidia40400 Actinidia chinensis HOM05D004787 ORTHO05D006972 1.1e-25 121.3 207 40.1
CSS0018052 Camellia sinensis var. sinensis HOM05D004787 ORTHO05D006972 1.1e-25 121.3 208 39.9
ECA246G0632 Erigeron canadensis HOM05D004787 ORTHO05D006972 1.8e-25 120.6 209 40.7
Potri.004G076600 Populus trichocarpa HOM05D004787 ORTHO05D006972 1.8e-25 120.6 199 42.2
Ciclev10011482m.g Citrus clementina HOM05D004787 ORTHO05D006972 2.4e-25 120.2 194 42.8
CsaV3_5G024370 Cucumis sativus L. HOM05D004787 ORTHO05D006972 2.4e-25 120.2 210 41.0
Migut.K00983 Erythranthe guttata HOM05D004787 ORTHO05D006972 2.4e-25 120.2 194 43.8
PSO384G2298 Papaver somniferum HOM05D004787 ORTHO05D006972 2.4e-25 120.2 174 51.1
TWI53G0480 Tripterygium wilfordii HOM05D004787 ORTHO05D006972 3.1e-25 119.8 207 40.6
Atru.chr1.1965 Acer truncatum HOM05D004787 ORTHO05D006972 4.1e-25 119.4 208 41.3
Gohir.A12G052700 Gossypium hirsutum HOM05D004787 ORTHO05D006972 4.1e-25 119.4 199 41.7
MD11G1181900 Malus domestica HOM05D004787 ORTHO05D006972 4.1e-25 119.4 194 41.8
Nn4g24844 Nelumbo nucifera HOM05D004787 ORTHO05D006972 4.1e-25 119.4 212 40.6
GSVIVG01001945001 Vitis vinifera HOM05D004787 ORTHO05D006972 4.1e-25 119.4 194 42.8
Manes.02G082200 Manihot esculenta HOM05D004787 ORTHO05D006972 5.4e-25 119.0 194 42.8
Medtr3g064180 Medicago truncatula HOM05D004787 ORTHO05D006972 5.4e-25 119.0 210 39.0
RcHm_v2.0_Chr3g0487991 Rosa chinensis HOM05D004787 ORTHO05D006972 5.4e-25 119.0 194 41.8
PGSC0003DMG400019729 Solanum tuberosum HOM05D004787 ORTHO05D006972 5.4e-25 119.0 193 42.0
SGA_v2.0_scaffold45G17100 Striga asiatica HOM05D004787 ORTHO05D006972 5.4e-25 119.0 204 42.2
Ca_15115_v3 Cicer arietinum L. HOM05D004787 ORTHO05D006972 7.0e-25 118.6 210 39.0
Hund06861 Selenicereus undatus HOM05D004787 ORTHO05D006972 7.0e-25 118.6 190 40.0
Solyc02g081410.3 Solanum lycopersicum HOM05D004787 ORTHO05D006972 7.0e-25 118.6 193 42.0
Sopen02g026040 Solanum pennellii HOM05D004787 ORTHO05D006972 7.0e-25 118.6 193 42.0
CiPaw.03G008000 Carya illinoinensis HOM05D004787 ORTHO05D006972 9.2e-25 118.2 194 41.8
Gohir.D12G051200 Gossypium hirsutum HOM05D004787 ORTHO05D006972 9.2e-25 118.2 194 42.3
Gorai.008G054500 Gossypium raimondii HOM05D004787 ORTHO05D006972 9.2e-25 118.2 194 42.3
PSO063G5381 Papaver somniferum HOM05D004787 ORTHO05D006972 9.2e-25 118.2 194 42.8
MELO3C025106.2 Cucumis melo HOM05D004787 ORTHO05D006972 1.2e-24 117.9 210 40.0
FvH4_1g27560 Fragaria vesca HOM05D004787 ORTHO05D006972 1.2e-24 117.9 194 41.2
PSO782G3524 Papaver somniferum HOM05D004787 ORTHO05D006972 1.2e-24 117.9 194 42.8
Psat5g143840 Pisum sativum HOM05D004787 ORTHO05D006972 1.2e-24 117.9 194 40.2
GSVIVG01035282001 Vitis vinifera HOM05D004787 ORTHO05D006972 1.2e-24 117.9 194 42.8
ClCG01G008420 Citrullus lanatus HOM05D004787 ORTHO05D006972 2.0e-24 117.1 194 41.8
Thecc.04G058600 Theobroma cacao HOM05D004787 ORTHO05D006972 2.0e-24 117.1 194 42.3
arahy.Tifrunner.gnm1.ann1.QP3PIR Arachis hypogaea HOM05D004787 ORTHO05D006972 3.5e-24 116.3 224 36.6
Peaxi162Scf00344g02023 Petunia axillaris HOM05D004787 ORTHO05D006972 3.5e-24 116.3 204 38.2
SMO276G0035 Selaginella moellendorffii HOM05D004787 ORTHO05D006972 3.5e-24 116.3 216 36.6
QL02p054528 Quercus lobata HOM05D004787 ORTHO05D006972 4.5e-24 115.9 194 41.8
PSO170G1852 Papaver somniferum HOM05D004787 ORTHO05D302361 5.9e-24 115.5 95 77.9
PSO210G5779 Papaver somniferum HOM05D004787 ORTHO05D303704 5.9e-24 115.5 95 77.9
Lsat_1_v5_gn_3_69560 Lactuca sativa HOM05D004787 ORTHO05D006972 7.8e-24 115.2 227 38.3
CDE05G1440 Ceratophyllum demersum HOM05D004787 ORTHO05D006972 1.0e-23 114.8 220 39.5
FAN28G1012 Fragaria x ananassa HOM05D004787 ORTHO05D006972 1.0e-23 114.8 190 39.5
FAN28G1537 Fragaria x ananassa HOM05D004787 ORTHO05D006972 1.7e-23 114.0 208 38.5
FAN19G0382 Fragaria x ananassa HOM05D004787 ORTHO05D006972 2.3e-23 113.6 190 38.9
FAN26G3076 Fragaria x ananassa HOM05D004787 ORTHO05D006972 2.3e-23 113.6 207 36.7
Lsat_1_v5_gn_3_69520 Lactuca sativa HOM05D004787 ORTHO05D006972 2.9e-23 113.2 219 38.8
Thhalv10020476m.g Eutrema salsugineum HOM05D004787 ORTHO05D006972 3.8e-23 112.8 196 40.8
EL10Ac4g08906 Beta vulgaris HOM05D004787 ORTHO05D006972 8.6e-23 111.7 195 39.5
Sp3g01740 Schrenkiella parvula HOM05D004787 ORTHO05D006972 1.1e-22 111.3 196 40.3
Dinv28256 Davidia involucrata HOM05D004787 ORTHO05D006972 1.5e-22 110.9 194 41.8
Eucgr.F02919 Eucalyptus grandis HOM05D004787 ORTHO05D006972 1.5e-22 110.9 210 38.6
Zm00001eb259490 Zea mays HOM05D004787 ORTHO05D006972 1.5e-22 110.9 209 39.2
AT3G02710 Arabidopsis thaliana HOM05D004787 ORTHO05D006972 1.9e-22 110.5 196 39.8
BNapus_Darmor_BZH_scaffold_99p00220 Brassica napus HOM05D004787 ORTHO05D006972 1.9e-22 110.5 196 39.3
Os02g0831300 Oryza sativa ssp. japonica HOM05D004787 ORTHO05D006972 2.5e-22 110.2 194 40.7
SEGI_38823 Sequoiadendron giganteum HOM05D004787 ORTHO05D006972 2.5e-22 110.2 208 38.0
Carub.0003s0181 Capsella rubella HOM05D004787 ORTHO05D006972 3.3e-22 109.8 196 40.3
THA.LOC104820926 Tarenaya hassleriana HOM05D004787 ORTHO05D006972 3.3e-22 109.8 212 38.2
BNapus_Darmor_BZH_scaffold_122p00190 Brassica napus HOM05D004787 ORTHO05D006972 5.6e-22 109.0 197 38.6
AL3G12100 Arabidopsis lyrata HOM05D004787 ORTHO05D006972 7.3e-22 108.6 196 39.8
CARHR076710 Cardamine hirsuta HOM05D004787 ORTHO05D006972 1.2e-21 107.8 196 40.3
BolC1t05882H Brassica oleracea HOM05D004787 ORTHO05D006972 2.8e-21 106.7 206 37.4
Cc07_g12650 Coffea canephora HOM05D004787 ORTHO05D006972 6.1e-21 105.5 156 42.3
BraA01t04622Z Brassica rapa HOM05D004787 ORTHO05D006972 1.0e-20 104.8 210 35.2
Aa31LG5G13180 Aethionema arabicum HOM05D004787 ORTHO05D006972 1.4e-20 104.4 233 35.2
Haze_14069 Corylus avellana HOM05D004787 ORTHO05D006972 1.4e-20 104.4 207 37.7
DCAR_003396 Daucus carota HOM05D004787 ORTHO05D006972 1.4e-20 104.4 206 37.9
VMungo0540G0637 Vigna mungo HOM05D004787 ORTHO05D006972 4.0e-20 102.8 206 35.9
Mapoly0108s0041 Marchantia polymorpha HOM05D004787 ORTHO05D006972 6.8e-20 102.1 194 38.7
MBI06_g02537_MAGBIO Magnolia biondii HOM05D004787 ORTHO05D006972 8.9e-20 101.7 227 34.8
Lj4C250G12 Lonicera japonica HOM05D004787 ORTHO05D006972 1.7e-18 97.4 204 36.3
Rhsim07G0211400 Rhododendron simsii HOM05D004787 ORTHO05D006972 1.7e-18 97.4 204 35.8
Sed0001995 Sechium edule HOM05D004787 ORTHO05D006972 4.9e-18 95.9 154 44.8
Pp3c23_13180 Physcomitrium patens HOM05D004787 ORTHO05D006972 6.4e-18 95.5 196 36.2
Pp3c23_13183 Physcomitrium patens HOM05D004787 ORTHO05D006972 6.4e-18 95.5 196 36.2
AUR62037503 Chenopodium quinoa HOM05D004787 ORTHO05D006972 8.3e-18 95.1 203 34.5
PSO541G2889 Papaver somniferum HOM05D004787 ORTHO05D303989 1.1e-17 94.7 128 45.3
Ah.04g162910 Amaranthus hybridus HOM05D004787 ORTHO05D006972 1.4e-17 94.4 193 35.2
CANSAT35G0608 Cannabis sativa HOM05D004787 ORTHO05D006972 1.4e-17 94.4 204 34.8
PSO759G0004 Papaver somniferum HOM05D004787 ORTHO05D302987 1.4e-17 94.4 56 83.9
AUR62004748 Chenopodium quinoa HOM05D004787 ORTHO05D006972 2.4e-17 93.6 203 34.5
Sabra04G0050800 Salix brachista HOM05D004787 ORTHO05D006972 1.2e-16 91.3 194 36.1
Nitab4.5_0003412g0040 Nicotiana tabacum HOM05D004787 ORTHO05D006972 1.7e-15 87.4 227 33.9
vmacro20447 Vaccinium macrocarpon HOM05D004787 ORTHO05D006972 2.3e-15 87.0 149 38.9
PSO447G0093 Papaver somniferum HOM05D004787 ORTHO05D304571 3.3e-14 83.2 120 46.7
AagrBONN_evm.TU.Sc2ySwM_228.1941__1942 Anthoceros agrestis HOM05D004787 ORTHO05D006972 4.3e-14 82.8 152 36.8
CBR_g66787 Chara braunii HOM05D004787 ORTHO05D006972 2.8e-13 80.1 209 31.6
Oeu031707.1 Olea europaea HOM05D004787 ORTHO05D006972 1.1e-12 78.2 114 42.1
SalBow5G5112 Salvia bowleyana HOM05D004787 ORTHO05D006972 1.1e-12 78.2 185 34.6
Nitab4.5_0000483g0190 Nicotiana tabacum HOM05D004787 ORTHO05D006972 4.0e-12 76.3 214 31.8
Hma1.2p1_0034F.1_g021490 Hydrangea macrophylla HOM05D004787 ORTHO05D006972 1.7e-10 70.9 134 40.3
ATR0618G058 Amborella trichopoda HOM05D004787 ORTHO05D006972 2.9e-10 70.1 184 32.1
Sc09g0004590 Simmondsia chinensis HOM05D004787 ORTHO05D006972 1.4e-09 67.8 138 37.0
unitig_32.g10735 Utricularia gibba HOM05D004787 ORTHO05D006972 3.2e-09 66.6 106 40.6
AL1G49080 Arabidopsis lyrata HOM05D004787 ORTHO05D006972 5.4e-09 65.9 138 39.1
Cpa.g.sc108.3 Carica papaya HOM05D004787 ORTHO05D006972 3.5e-08 63.2 111 36.9
MCO05G673 Micromonas commoda HOM05D004787 ORTHO05D006972 5.0e-07 59.3 191 29.3
PSO832G3890 Papaver somniferum HOM05D000071 ORTHO05D003524 1.9e-06 57.4 53 60.4


User provided reference genes

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