Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO173G0010 Papaver somniferum HOM05D004164 ORTHO05D004891 2.4e-198 695.3 347 100.0
PSO832G0925 Papaver somniferum HOM05D004164 ORTHO05D004891 1.6e-162 576.2 334 84.7
PSO761G0549 Papaver somniferum HOM05D004164 ORTHO05D004891 3.8e-159 565.1 348 80.2
PSO782G1386 Papaver somniferum HOM05D004164 ORTHO05D004891 1.4e-158 563.1 335 83.0
PSO063G3797 Papaver somniferum HOM05D004164 ORTHO05D004891 7.9e-157 557.4 332 80.4
PSO173G0166 Papaver somniferum HOM05D004164 ORTHO05D004891 6.0e-149 531.2 262 100.0
Nn3g21861 Nelumbo nucifera HOM05D004164 ORTHO05D004891 1.9e-147 526.2 333 76.3
TAR365G1146 Trochodendron aralioides HOM05D004164 ORTHO05D004891 7.2e-142 507.7 332 72.3
Nn4g25427 Nelumbo nucifera HOM05D004164 ORTHO05D004891 5.7e-139 498.0 333 70.3
PSO781G0333 Papaver somniferum HOM05D004164 ORTHO05D004891 1.4e-137 493.4 330 74.5
PSO210G5660 Papaver somniferum HOM05D004164 ORTHO05D004891 1.4e-132 476.9 343 66.8
PSO210G6256 Papaver somniferum HOM05D004164 ORTHO05D004891 4.8e-130 468.4 341 65.4
PSO761G0590 Papaver somniferum HOM05D004164 ORTHO05D004891 4.8e-130 468.4 335 66.9
PSO832G1962 Papaver somniferum HOM05D004164 ORTHO05D004891 2.0e-128 463.0 333 67.3
PSO507G0030 Papaver somniferum HOM05D004164 ORTHO05D004891 5.9e-128 461.5 334 67.1
PSO832G4194 Papaver somniferum HOM05D004164 ORTHO05D004891 1.9e-126 456.4 333 64.6
PSO507G0017 Papaver somniferum HOM05D004164 ORTHO05D004891 2.1e-125 453.0 333 63.7
MBI18_g36466_MAGBIO Magnolia biondii HOM05D004164 ORTHO05D004891 3.0e-124 449.1 343 65.9
MBI18_g40410_MAGBIO Magnolia biondii HOM05D004164 ORTHO05D004891 1.1e-123 447.2 333 64.3
PSO832G2156 Papaver somniferum HOM05D004164 ORTHO05D004891 2.0e-123 446.4 333 63.7
Aqoxy2G03733 Aquilegia oxysepala HOM05D004164 ORTHO05D004891 5.9e-120 434.9 322 66.5
PSO761G0410 Papaver somniferum HOM05D004164 ORTHO05D004891 2.9e-111 406.0 333 58.3
PSO646G0001 Papaver somniferum HOM05D004164 ORTHO05D004891 2.7e-104 382.9 195 96.9
Duzib132G1201 Durio zibethinus HOM05D004164 ORTHO05D004891 1.6e-96 357.1 330 54.8
Aa31LG1G17650 Aethionema arabicum HOM05D004164 ORTHO05D004891 3.5e-96 355.9 328 53.7
Lj4g0000280 Lotus japonicus HOM05D004164 ORTHO05D004891 7.8e-96 354.8 329 53.5
Gohir.D12G015900 Gossypium hirsutum HOM05D004164 ORTHO05D004891 1.7e-95 353.6 333 55.0
Gorai.008G016000 Gossypium raimondii HOM05D004164 ORTHO05D004891 1.7e-95 353.6 333 55.0
Thecc.02G135100 Theobroma cacao HOM05D004164 ORTHO05D004891 2.3e-95 353.2 331 54.4
CSS0040430 Camellia sinensis var. sinensis HOM05D004164 ORTHO05D004891 3.9e-95 352.4 332 53.9
HanXRQChr10g0291731 Helianthus annuus HOM05D004164 ORTHO05D004891 3.9e-95 352.4 330 53.3
TAR381G0722 Trochodendron aralioides HOM05D004164 ORTHO05D004891 3.9e-95 352.4 333 52.9
Thhalv10004559m.g Eutrema salsugineum HOM05D004164 ORTHO05D004891 1.1e-94 350.9 328 54.3
Gohir.A12G015600 Gossypium hirsutum HOM05D004164 ORTHO05D004891 1.5e-94 350.5 333 54.7
CSS0002795 Camellia sinensis var. sinensis HOM05D004164 ORTHO05D004891 1.9e-94 350.1 329 53.8
AL8G41570 Arabidopsis lyrata HOM05D004164 ORTHO05D004891 2.5e-94 349.7 331 52.6
BcaC01g02680 Brassica carinata HOM05D004164 ORTHO05D004891 3.3e-94 349.4 328 53.4
BolC3t18463H Brassica oleracea HOM05D004164 ORTHO05D004891 3.3e-94 349.4 328 53.4
MD05G1043200 Malus domestica HOM05D004164 ORTHO05D004891 3.3e-94 349.4 337 52.8
Sp2g27310 Schrenkiella parvula HOM05D004164 ORTHO05D004891 5.6e-94 348.6 328 54.0
VMungo0540G2402 Vigna mungo HOM05D004164 ORTHO05D004891 5.6e-94 348.6 330 53.3
Aqoxy6G02071 Aquilegia oxysepala HOM05D004164 ORTHO05D004891 7.3e-94 348.2 330 53.6
AL8G41600 Arabidopsis lyrata HOM05D004164 ORTHO05D004891 7.3e-94 348.2 331 52.3
A06p30940 Brassica napus HOM05D004164 ORTHO05D004891 7.3e-94 348.2 336 52.4
BraA06t26033Z Brassica rapa HOM05D004164 ORTHO05D004891 7.3e-94 348.2 336 52.4
CARHR278160 Cardamine hirsuta HOM05D004164 ORTHO05D004891 7.3e-94 348.2 333 52.3
Actinidia24002 Actinidia chinensis HOM05D004164 ORTHO05D004891 9.5e-94 347.8 330 53.0
arahy.Tifrunner.gnm1.ann1.XH6BES Arachis hypogaea HOM05D004164 ORTHO05D004891 1.2e-93 347.4 330 53.0
BcaB02g09775 Brassica carinata HOM05D004164 ORTHO05D004891 1.6e-93 347.1 333 52.6
Carub.0008s2504 Capsella rubella HOM05D004164 ORTHO05D004891 1.6e-93 347.1 328 54.3
AT5G64250 Arabidopsis thaliana HOM05D004164 ORTHO05D004891 2.1e-93 346.7 331 52.9
Gohir.A04G114200 Gossypium hirsutum HOM05D004164 ORTHO05D004891 2.1e-93 346.7 334 53.9
TPR.G10321 Trifolium pratense HOM05D004164 ORTHO05D004891 2.1e-93 346.7 330 52.1
C03p62030 Brassica napus HOM05D004164 ORTHO05D004891 2.8e-93 346.3 328 53.0
PSO210G2683 Papaver somniferum HOM05D004164 ORTHO05D004891 2.8e-93 346.3 330 53.0
THA.LOC104799917 Tarenaya hassleriana HOM05D004164 ORTHO05D004891 2.8e-93 346.3 330 52.7
Eucgr.G00847 Eucalyptus grandis HOM05D004164 ORTHO05D004891 6.1e-93 345.1 330 51.8
PGR042G3604 Punica granatum HOM05D004164 ORTHO05D004891 6.1e-93 345.1 334 51.5
TWI14G1169 Tripterygium wilfordii HOM05D004164 ORTHO05D004891 6.1e-93 345.1 330 53.0
Sed0011830 Sechium edule HOM05D004164 ORTHO05D004891 8.0e-93 344.7 329 52.0
Hma1.2p1_0784F.1_g217100 Hydrangea macrophylla HOM05D004164 ORTHO05D004891 1.4e-92 344.0 333 52.9
Lj6g0000010 Lotus japonicus HOM05D004164 ORTHO05D004891 1.4e-92 344.0 329 52.0
MELO3C018623.2 Cucumis melo HOM05D004164 ORTHO05D004891 1.8e-92 343.6 329 51.7
Glyma.08G178100 Glycine max HOM05D004164 ORTHO05D004891 3.1e-92 342.8 330 52.4
Cc02_g21290 Coffea canephora HOM05D004164 ORTHO05D004891 4.0e-92 342.4 330 52.4
FAN18G3873 Fragaria x ananassa HOM05D004164 ORTHO05D004891 4.0e-92 342.4 330 52.1
Ciclev10028812m.g Citrus clementina HOM05D004164 ORTHO05D004891 5.2e-92 342.0 328 53.0
Zm00001eb033580 Zea mays HOM05D004164 ORTHO05D004891 1.5e-91 340.5 329 52.3
Dinv24178 Davidia involucrata HOM05D004164 ORTHO05D004891 2.0e-91 340.1 333 51.1
Cfa005671 Carpinus fangiana HOM05D004164 ORTHO05D004891 2.6e-91 339.7 328 51.5
CiPaw.05G034200 Carya illinoinensis HOM05D004164 ORTHO05D004891 2.6e-91 339.7 330 52.1
QL11p022503 Quercus lobata HOM05D004164 ORTHO05D004891 3.4e-91 339.3 330 50.6
TWI59G0238 Tripterygium wilfordii HOM05D004164 ORTHO05D004891 3.4e-91 339.3 330 51.8
RcHm_v2.0_Chr6g0271551 Rosa chinensis HOM05D004164 ORTHO05D004891 5.8e-91 338.6 330 52.1
Atru.chr6.1169 Acer truncatum HOM05D004164 ORTHO05D004891 9.8e-91 337.8 329 51.1
vmacro01837 Vaccinium macrocarpon HOM05D004164 ORTHO05D004891 9.8e-91 337.8 329 52.3
Ca_16502_v3 Cicer arietinum L. HOM05D004164 ORTHO05D004891 1.3e-90 337.4 330 51.8
ClCG09G015620 Citrullus lanatus HOM05D004164 ORTHO05D004891 1.3e-90 337.4 329 52.0
Lalb_Chr20g0122971 Lupinus albus HOM05D004164 ORTHO05D004891 1.3e-90 337.4 330 52.4
Lsat_1_v5_gn_5_108141 Lactuca sativa HOM05D004164 ORTHO05D004891 2.2e-90 336.7 330 50.3
GSVIVG01015759001 Vitis vinifera HOM05D004164 ORTHO05D004891 2.2e-90 336.7 330 51.5
CANSAT11G1236 Cannabis sativa HOM05D004164 ORTHO05D004891 2.9e-90 336.3 337 51.0
ECA234G4615 Erigeron canadensis HOM05D004164 ORTHO05D004891 2.9e-90 336.3 330 50.6
Potri.017G051800 Populus trichocarpa HOM05D004164 ORTHO05D004891 2.9e-90 336.3 329 52.3
PGSC0003DMG400012550 Solanum tuberosum HOM05D004164 ORTHO05D004891 3.7e-90 335.9 330 51.5
Pp3c2_200 Physcomitrium patens HOM05D004164 ORTHO05D004891 4.9e-90 335.5 324 50.9
Sabra17G0043400 Salix brachista HOM05D004164 ORTHO05D004891 8.3e-90 334.7 330 50.9
SabraUnG0002700 Salix brachista HOM05D004164 ORTHO05D004891 8.3e-90 334.7 330 50.9
CsaV3_7G006720 Cucumis sativus L. HOM05D004164 ORTHO05D004891 1.1e-89 334.3 316 52.8
Manes.07G033800 Manihot esculenta HOM05D004164 ORTHO05D004891 1.1e-89 334.3 334 51.2
Peaxi162Scf01060g00013 Petunia axillaris HOM05D004164 ORTHO05D004891 1.4e-89 334.0 330 50.9
Ah.01g022180 Amaranthus hybridus HOM05D004164 ORTHO05D004891 1.9e-89 333.6 331 49.8
Phvul.006G205400 Phaseolus vulgaris HOM05D004164 ORTHO05D004891 1.9e-89 333.6 330 51.8
Prupe.8G064000 Prunus persica HOM05D004164 ORTHO05D004891 2.4e-89 333.2 329 51.1
ATR0782G002 Amborella trichopoda HOM05D004164 ORTHO05D004891 3.2e-89 332.8 321 53.6
CAN.G523.53 Capsicum annuum HOM05D004164 ORTHO05D004891 3.2e-89 332.8 330 50.6
Medtr3g069190 Medicago truncatula HOM05D004164 ORTHO05D004891 7.0e-89 331.6 330 51.2
Sopen01g047880 Solanum pennellii HOM05D004164 ORTHO05D004891 7.0e-89 331.6 330 50.6
Solyc01g105370.4 Solanum lycopersicum HOM05D004164 ORTHO05D004891 9.2e-89 331.3 330 50.6
MSTRG.20292 Avicennia marina HOM05D004164 ORTHO05D004891 2.0e-88 330.1 329 50.5
AUR62013150 Chenopodium quinoa HOM05D004164 ORTHO05D004891 3.5e-88 329.3 345 50.7
Psat5g128640 Pisum sativum HOM05D004164 ORTHO05D004891 6.0e-88 328.6 330 51.2
Hund00072 Selenicereus undatus HOM05D004164 ORTHO05D004891 7.8e-88 328.2 330 48.8
Gorai.012G142600 Gossypium raimondii HOM05D004164 ORTHO05D004891 1.3e-87 327.4 334 51.5
Sc08g0003530 Simmondsia chinensis HOM05D004164 ORTHO05D004891 2.3e-87 326.6 328 50.9
Lj5A235T51 Lonicera japonica HOM05D004164 ORTHO05D004891 3.0e-87 326.2 330 49.4
Nitab4.5_0000863g0200 Nicotiana tabacum HOM05D004164 ORTHO05D004891 5.0e-87 325.5 330 49.7
Mapoly0043s0005 Marchantia polymorpha HOM05D004164 ORTHO05D004891 8.6e-87 324.7 332 49.1
DCAR_001777 Daucus carota HOM05D004164 ORTHO05D004891 1.5e-86 323.9 330 50.3
RcHm_v2.0_Chr6g0271711 Rosa chinensis HOM05D004164 ORTHO05D004891 5.6e-86 322.0 331 50.5
Migut.B00589 Erythranthe guttata HOM05D004164 ORTHO05D004891 1.6e-85 320.5 335 49.3
Cpa.g.sc42.29 Carica papaya HOM05D004164 ORTHO05D004891 2.3e-84 316.6 349 49.6
arahy.Tifrunner.gnm1.ann1.IF3X13 Arachis hypogaea HOM05D004164 ORTHO05D004891 8.9e-84 314.7 330 49.7
Rhsim11G0139400 Rhododendron simsii HOM05D004164 ORTHO05D004891 8.9e-84 314.7 327 50.8
SalBow5G1609 Salvia bowleyana HOM05D004164 ORTHO05D004891 1.5e-83 313.9 361 46.3
SalBow5G4318 Salvia bowleyana HOM05D004164 ORTHO05D004891 2.0e-83 313.5 361 46.3
Gohir.D04G155600 Gossypium hirsutum HOM05D004164 ORTHO05D004891 3.4e-83 312.8 334 49.7
SMO143G0159 Selaginella moellendorffii HOM05D004164 ORTHO05D004891 1.7e-82 310.5 329 45.3
PSO507G0015 Papaver somniferum HOM05D004164 ORTHO05D004891 1.2e-80 304.3 216 67.6
Oeu007975.1 Olea europaea HOM05D004164 ORTHO05D004891 2.3e-79 300.1 401 42.1
FvH4_5g07040 Fragaria vesca HOM05D004164 ORTHO05D004891 3.9e-79 299.3 282 51.4
PSO541G2216 Papaver somniferum HOM05D004164 ORTHO05D004891 1.1e-78 297.7 197 75.1
AagrBONN_evm.TU.Sc2ySwM_228.2787 Anthoceros agrestis HOM05D004164 ORTHO05D004891 1.2e-77 294.3 324 45.1
EL10Ac9g21504 Beta vulgaris HOM05D004164 ORTHO05D004891 2.6e-75 286.6 330 44.8
HPP92_004281 Vanilla planifolia HOM05D004164 ORTHO05D004891 4.4e-75 285.8 329 45.6
Os08g0485400 Oryza sativa ssp. japonica HOM05D004164 ORTHO05D004891 1.4e-73 280.8 272 52.9
MBI02_g02171_MAGBIO Magnolia biondii HOM05D004164 ORTHO05D004891 1.2e-72 277.7 282 49.3
AUR62010154 Chenopodium quinoa HOM05D004164 ORTHO05D004891 3.3e-70 269.6 344 44.2
Nn2g14913 Nelumbo nucifera HOM05D004164 ORTHO05D004891 2.1e-69 266.9 333 47.7
SGA_v2.0_scaffold83G26314 Striga asiatica HOM05D004164 ORTHO05D004891 2.7e-64 250.0 355 40.3
Lj6g0021052 Lotus japonicus HOM05D004164 ORTHO05D004891 2.8e-61 240.0 227 52.4
FAN15G1714 Fragaria x ananassa HOM05D004164 ORTHO05D004891 2.4e-60 236.9 227 52.9
Prupe.8G063800 Prunus persica HOM05D004164 ORTHO05D004891 1.4e-57 227.6 214 53.3
PSO400G0001 Papaver somniferum HOM05D004164 ORTHO05D004891 2.1e-48 197.2 98 100.0
Haze_10597 Corylus avellana HOM05D004164 ORTHO05D004891 9.6e-46 188.3 232 43.1
Nitab4.5_0002401g0010 Nicotiana tabacum HOM05D004164 ORTHO05D004891 9.0e-36 155.2 149 54.4
Actinidia26597 Actinidia chinensis HOM05D004164 ORTHO05D004891 1.2e-35 154.8 144 50.7
FAN24G1884 Fragaria x ananassa HOM05D004164 ORTHO05D004891 1.2e-35 154.8 177 46.3
FvH4_2g11900 Fragaria vesca HOM05D004164 ORTHO05D004891 2.9e-34 150.2 143 53.1
TPR.G9891 Trifolium pratense HOM05D004164 ORTHO05D004891 2.5e-30 137.1 175 44.0
Pp3s30_626 Physcomitrium patens HOM05D004164 ORTHO05D004891 2.2e-29 134.0 361 30.5
MD05G1043700 Malus domestica HOM05D004164 ORTHO05D004891 1.5e-27 127.9 222 37.4
PRCOL_00000119 Prasinoderma coloniale HOM05D004164 ORTHO05D004891 2.2e-26 124.0 348 28.2
Cfa026765 Carpinus fangiana HOM05D004164 ORTHO05D004891 1.4e-25 121.3 355 31.3
TPR.G11284 Trifolium pratense HOM05D004164 ORTHO05D004891 2.1e-24 117.5 120 48.3
FvH4_2g11890 Fragaria vesca HOM05D004164 ORTHO05D004891 2.8e-21 107.1 135 45.9
FAN24G2526 Fragaria x ananassa HOM05D004164 ORTHO05D004891 4.5e-19 99.8 105 48.6
MBI18_g38521_MAGBIO Magnolia biondii HOM05D004164 ORTHO05D004891 5.9e-19 99.4 157 40.1
Cfa023826 Carpinus fangiana HOM05D004164 ORTHO05D004891 1.9e-17 94.4 302 29.1
TPR.G19821 Trifolium pratense HOM05D004164 ORTHO05D004891 1.9e-17 94.4 162 36.4
Cfa026889 Carpinus fangiana HOM05D004164 ORTHO05D004891 1.5e-14 84.7 365 25.5
MCO10G397 Micromonas commoda HOM05D004164 ORTHO05D004891 1.2e-11 75.1 314 27.4
Prupe.8G063900 Prunus persica HOM05D004164 ORTHO05D004891 3.8e-10 70.1 63 44.4
CSS0002492 Camellia sinensis var. sinensis HOM05D004164 ORTHO05D004891 5.0e-10 69.7 57 52.6
Hma1.2p1_0784F.1_g217070 Hydrangea macrophylla HOM05D004164 ORTHO05D004891 6.5e-10 69.3 70 44.3
COL.COLO4_01173 Corchorus olitorius HOM05D004164 ORTHO05D004891 1.1e-09 68.6 164 29.9
Nn5g30063 Nelumbo nucifera HOM05D004164 ORTHO05D004891 3.6e-08 63.5 52 51.9
TAR019G0004 Trochodendron aralioides HOM05D004164 ORTHO05D004891 6.1e-08 62.8 67 46.3
TPR.G10092 Trifolium pratense HOM05D004164 ORTHO05D004891 1.4e-07 61.6 76 43.4
TAR622G0536 Trochodendron aralioides HOM05D004164 ORTHO05D000005 1.4e-07 61.6 59 44.1
MD10G1050600 Malus domestica HOM05D004164 ORTHO05D004891 6.7e-07 59.3 119 26.9
Zm00001eb051650 Zea mays HOM05D004164 ORTHO05D004891 7.5e-06 55.8 40 52.5


User provided reference genes

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