Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO170G6909 Papaver somniferum HOM05D004845 ORTHO05D005957 0.0e+00 2105.9 1185 100.0
TAR629G3185 Trochodendron aralioides HOM05D004845 ORTHO05D005957 3.1e-261 906.0 1232 53.7
Nn1g08771 Nelumbo nucifera HOM05D004845 ORTHO05D005957 6.9e-245 851.7 1227 52.6
Dinv30397 Davidia involucrata HOM05D004845 ORTHO05D005957 4.2e-218 762.7 1268 48.5
Dinv37932 Davidia involucrata HOM05D004845 ORTHO05D005957 2.5e-210 736.9 1285 48.0
QL05p015844 Quercus lobata HOM05D004845 ORTHO05D005957 3.4e-207 726.5 1305 47.9
vmacro18819 Vaccinium macrocarpon HOM05D004845 ORTHO05D005957 9.8e-191 671.8 1283 45.4
Rhsim08G0231600 Rhododendron simsii HOM05D004845 ORTHO05D005957 2.5e-186 657.1 1228 45.7
Aqoxy7G00060 Aquilegia oxysepala HOM05D004845 ORTHO05D005957 4.3e-186 656.4 1279 45.8
RcHm_v2.0_Chr2g0142521 Rosa chinensis HOM05D004845 ORTHO05D005957 7.3e-186 655.6 1272 44.2
CiPaw.02G142000 Carya illinoinensis HOM05D004845 ORTHO05D005957 3.6e-185 653.3 1265 44.6
Atru.chr1.3636 Acer truncatum HOM05D004845 ORTHO05D005957 1.0e-184 651.7 1207 45.7
Duzib160G0801 Durio zibethinus HOM05D004845 ORTHO05D005957 1.4e-181 641.3 1236 44.7
Thecc.06G108000 Theobroma cacao HOM05D004845 ORTHO05D005957 2.4e-181 640.6 1294 45.5
Cfa003605 Carpinus fangiana HOM05D004845 ORTHO05D005957 1.6e-180 637.9 1199 46.3
Gohir.A05G133700 Gossypium hirsutum HOM05D004845 ORTHO05D005957 1.8e-176 624.4 1231 45.7
GSVIVG01016889001 Vitis vinifera HOM05D004845 ORTHO05D005957 5.2e-176 622.9 1266 40.0
FAN14G1946 Fragaria x ananassa HOM05D004845 ORTHO05D005957 4.4e-175 619.8 1278 43.4
FvH4_6g32970 Fragaria vesca HOM05D004845 ORTHO05D005957 5.8e-175 619.4 1281 43.4
Gohir.D05G135700 Gossypium hirsutum HOM05D004845 ORTHO05D005957 9.8e-175 618.6 1233 45.6
Gorai.009G139700 Gossypium raimondii HOM05D004845 ORTHO05D005957 2.9e-174 617.1 1227 45.6
FAN02G0586 Fragaria x ananassa HOM05D004845 ORTHO05D005957 4.6e-172 609.8 1235 44.1
Cc04_g02180 Coffea canephora HOM05D004845 ORTHO05D005957 3.3e-170 603.6 1282 42.2
Manes.04G137600 Manihot esculenta HOM05D004845 ORTHO05D005957 1.6e-169 601.3 1217 44.0
Potri.003G033100 Populus trichocarpa HOM05D004845 ORTHO05D005957 1.1e-168 598.6 1260 42.9
FAN09G4600 Fragaria x ananassa HOM05D004845 ORTHO05D005957 3.4e-167 593.6 1278 42.7
Prupe.3G052500 Prunus persica HOM05D004845 ORTHO05D005957 3.2e-165 587.0 1213 44.2
CANSAT56G3316 Cannabis sativa HOM05D004845 ORTHO05D005957 1.7e-163 581.3 1208 42.6
ClCG07G013620 Citrullus lanatus HOM05D004845 ORTHO05D005957 4.3e-162 576.6 1274 43.3
Glyma.07G012400 Glycine max HOM05D004845 ORTHO05D005957 7.3e-162 575.9 1224 42.8
MELO3C013040.2 Cucumis melo HOM05D004845 ORTHO05D005957 3.6e-161 573.5 1274 42.4
Ciclev10024729m.g Citrus clementina HOM05D004845 ORTHO05D005957 8.1e-161 572.4 1232 43.0
CsaV3_3G044010 Cucumis sativus L. HOM05D004845 ORTHO05D005957 8.1e-161 572.4 1273 42.9
Sed0014548 Sechium edule HOM05D004845 ORTHO05D005957 8.1e-161 572.4 1275 42.8
Duzib235G0635 Durio zibethinus HOM05D004845 ORTHO05D005957 1.8e-160 571.2 1277 42.1
MD09G1196000 Malus domestica HOM05D004845 ORTHO05D005957 1.8e-160 571.2 1231 42.1
DCAR_026375 Daucus carota HOM05D004845 ORTHO05D005957 5.8e-159 566.2 1189 42.4
Glyma.08G196100 Glycine max HOM05D004845 ORTHO05D005957 5.8e-159 566.2 1228 43.2
Sabra03G0019000 Salix brachista HOM05D004845 ORTHO05D005957 4.9e-158 563.1 1251 42.6
MSTRG.22604 Avicennia marina HOM05D004845 ORTHO05D005957 1.0e-155 555.4 1273 41.4
Peaxi162Scf00038g01322 Petunia axillaris HOM05D004845 ORTHO05D005957 2.1e-153 547.7 1269 40.4
Medtr8g015620 Medicago truncatula HOM05D004845 ORTHO05D005957 5.8e-151 539.7 1223 41.1
Ca_23299_v3 Cicer arietinum L. HOM05D004845 ORTHO05D005957 1.1e-149 535.4 1231 40.8
Sopen03g040190 Solanum pennellii HOM05D004845 ORTHO05D005957 1.7e-147 528.1 1273 40.5
arahy.Tifrunner.gnm1.ann1.JSQ5P9 Arachis hypogaea HOM05D004845 ORTHO05D005957 1.9e-146 524.6 1221 41.2
FAN05G2503 Fragaria x ananassa HOM05D004845 ORTHO05D005957 2.5e-146 524.2 1426 37.6
Hund07666 Selenicereus undatus HOM05D004845 ORTHO05D005957 5.6e-146 523.1 1199 40.5
Migut.I01002 Erythranthe guttata HOM05D004845 ORTHO05D005957 9.6e-146 522.3 1216 40.4
Manes.11G028800 Manihot esculenta HOM05D004845 ORTHO05D005957 9.6e-146 522.3 1285 41.4
Solyc03g121380.3 Solanum lycopersicum HOM05D004845 ORTHO05D005957 1.8e-144 518.1 1275 40.5
TWI31G1049 Tripterygium wilfordii HOM05D004845 ORTHO05D005957 5.8e-143 513.1 1303 39.7
Sc12g0009860 Simmondsia chinensis HOM05D004845 ORTHO05D005957 6.4e-142 509.6 1205 41.8
Oeu052809.1 Olea europaea HOM05D004845 ORTHO05D005957 8.4e-142 509.2 1104 40.9
Lj3g0006882 Lotus japonicus HOM05D004845 ORTHO05D005957 2.4e-141 507.7 1269 39.6
Sed0023831 Sechium edule HOM05D004845 ORTHO05D005957 1.6e-140 505.0 1274 40.9
CAN.G1668.10 Capsicum annuum HOM05D004845 ORTHO05D005957 6.7e-139 499.6 1170 40.1
COL.COLO4_30609 Corchorus olitorius HOM05D004845 ORTHO05D005957 4.3e-138 496.9 1220 36.1
Cpa.g.sc131.35 Carica papaya HOM05D004845 ORTHO05D005957 7.4e-138 496.1 1180 42.6
Actinidia32134 Actinidia chinensis HOM05D004845 ORTHO05D005957 3.7e-137 493.8 1068 43.8
arahy.Tifrunner.gnm1.ann1.7F0ZFP Arachis hypogaea HOM05D004845 ORTHO05D005957 1.2e-135 488.8 1239 40.1
EL10Ac9g21102 Beta vulgaris HOM05D004845 ORTHO05D005957 5.8e-135 486.5 1202 40.5
Lalb_Chr04g0263091 Lupinus albus HOM05D004845 ORTHO05D005957 5.8e-135 486.5 1238 40.1
MD17G1176700 Malus domestica HOM05D004845 ORTHO05D005957 2.9e-134 484.2 1287 40.2
Phvul.010G141800 Phaseolus vulgaris HOM05D004845 ORTHO05D005957 4.9e-134 483.4 1229 39.1
PGR102G0505 Punica granatum HOM05D004845 ORTHO05D005957 1.4e-133 481.9 1261 41.1
VMungo0331G0639 Vigna mungo HOM05D004845 ORTHO05D005957 1.0e-131 475.7 1230 38.7
HanXRQChr09g0276331 Helianthus annuus HOM05D004845 ORTHO05D005957 1.2e-127 462.2 1226 39.6
Lj3g0020048 Lotus japonicus HOM05D004845 ORTHO05D005957 1.3e-126 458.8 1243 38.4
ATR0730G184 Amborella trichopoda HOM05D004845 ORTHO05D005957 1.2e-124 452.2 1222 39.3
ECA232G1750 Erigeron canadensis HOM05D004845 ORTHO05D005957 1.1e-122 445.7 1244 38.3
THA.LOC104817934 Tarenaya hassleriana HOM05D004845 ORTHO05D005957 4.3e-122 443.7 1312 34.9
Oeu026736.3 Olea europaea HOM05D004845 ORTHO05D005957 6.9e-120 436.4 1211 35.0
Thhalv10019924m.g Eutrema salsugineum HOM05D004845 ORTHO05D005957 1.2e-119 435.6 1194 37.0
Lsat_1_v5_gn_4_95940 Lactuca sativa HOM05D004845 ORTHO05D005957 2.5e-117 427.9 1194 38.6
THA.LOC104810560 Tarenaya hassleriana HOM05D004845 ORTHO05D005957 7.2e-117 426.4 1321 35.3
AUR62038325 Chenopodium quinoa HOM05D004845 ORTHO05D005957 9.4e-117 426.0 1212 34.1
CDE10G0270 Ceratophyllum demersum HOM05D004845 ORTHO05D005957 7.9e-116 422.9 1187 38.0
SGA_v2.0_scaffold71G23747 Striga asiatica HOM05D004845 ORTHO05D005957 1.5e-114 418.7 1165 35.4
Carub.0003s2130 Capsella rubella HOM05D004845 ORTHO05D005957 2.5e-114 417.9 1223 37.5
AL3G35330 Arabidopsis lyrata HOM05D004845 ORTHO05D005957 3.7e-113 414.1 1204 37.5
Sp3g19330 Schrenkiella parvula HOM05D004845 ORTHO05D005957 4.8e-113 413.7 1178 37.2
AT3G21290 Arabidopsis thaliana HOM05D004845 ORTHO05D005957 2.9e-110 404.4 1195 37.0
AUR62023919 Chenopodium quinoa HOM05D004845 ORTHO05D005957 4.2e-109 400.6 1225 33.1
Zm00001eb006560 Zea mays HOM05D004845 ORTHO05D005957 9.4e-109 399.4 1284 35.5
DCAR_007608 Daucus carota HOM05D004845 ORTHO05D005957 1.2e-108 399.1 1185 36.5
Ah.01g016900 Amaranthus hybridus HOM05D004845 ORTHO05D005957 1.8e-104 385.2 1138 37.3
HanXRQChr05g0140141 Helianthus annuus HOM05D004845 ORTHO05D005957 7.0e-104 383.3 1196 32.6
CSS0001379 Camellia sinensis var. sinensis HOM05D004845 ORTHO05D005957 1.3e-102 379.0 827 45.0
Eucgr.J02886 Eucalyptus grandis HOM05D004845 ORTHO05D005957 5.2e-99 367.1 1041 40.6
Zm00001eb401540 Zea mays HOM05D004845 ORTHO05D005957 2.6e-98 364.8 1220 35.0
BcaB06g26218 Brassica carinata HOM05D004845 ORTHO05D005957 2.0e-95 355.1 1264 33.9
BraA05t21625Z Brassica rapa HOM05D004845 ORTHO05D005957 1.3e-94 352.4 1153 34.7
Lj5C49T6 Lonicera japonica HOM05D004845 ORTHO05D005957 1.3e-94 352.4 1011 35.9
Nitab4.5_0004848g0010 Nicotiana tabacum HOM05D004845 ORTHO05D005957 1.3e-94 352.4 1213 35.4
A05p27330 Brassica napus HOM05D004845 ORTHO05D005957 6.5e-94 350.1 1153 34.6
BcaC05g28184 Brassica carinata HOM05D004845 ORTHO05D005957 2.7e-92 344.7 1149 34.9
C05p42240 Brassica napus HOM05D004845 ORTHO05D005957 2.7e-92 344.7 1149 34.9
BolC5t32952H Brassica oleracea HOM05D004845 ORTHO05D005957 2.7e-92 344.7 1149 34.9
Aa31LG8G7990 Aethionema arabicum HOM05D004845 ORTHO05D005957 6.1e-92 343.6 1194 37.4
MBI01_g37799_MAGBIO Magnolia biondii HOM05D004845 ORTHO05D005957 1.2e-90 339.3 754 37.9
SEGI_05846 Sequoiadendron giganteum HOM05D004845 ORTHO05D005957 1.3e-89 335.9 1283 33.4
CDE10G0876 Ceratophyllum demersum HOM05D004845 ORTHO05D005957 9.4e-85 319.7 388 52.6
Psat4g193760 Pisum sativum HOM05D004845 ORTHO05D005957 1.6e-84 318.9 1062 37.0
SEGI_07021 Sequoiadendron giganteum HOM05D004845 ORTHO05D005957 2.3e-78 298.5 1253 32.7
Actinidia21742 Actinidia chinensis HOM05D004845 ORTHO05D005957 9.8e-74 283.1 886 33.0
SGA_v2.0_scaffold45G16992 Striga asiatica HOM05D004845 ORTHO05D005957 2.9e-73 281.6 1171 28.7
TPR.G8763 Trifolium pratense HOM05D004845 ORTHO05D005957 8.3e-73 280.0 1263 33.1
Haze_15920 Corylus avellana HOM05D004845 ORTHO05D005957 9.8e-66 256.5 559 37.6
unitig_749.g14048 Utricularia gibba HOM05D004845 ORTHO05D005957 1.9e-64 252.3 946 34.2
CARHR097190 Cardamine hirsuta HOM05D004845 ORTHO05D005957 4.1e-64 251.1 1025 33.5
Actinidia21743 Actinidia chinensis HOM05D004845 ORTHO05D005957 2.5e-61 241.9 311 53.1
Lalb_Chr15g0087461 Lupinus albus HOM05D004845 ORTHO05D005957 4.3e-61 241.1 1087 30.3
BcaC09g49066 Brassica carinata HOM05D004845 ORTHO05D005957 4.9e-57 227.6 1199 29.6
HPP92_028291 Vanilla planifolia HOM05D004845 ORTHO05D005957 7.3e-53 213.8 228 54.4
CDE10G0326 Ceratophyllum demersum HOM05D004845 ORTHO05D005957 1.2e-47 196.4 696 29.9
Duzib192G0218 Durio zibethinus HOM05D004845 ORTHO05D005957 1.9e-45 189.1 248 52.0
Atru.chr1.3631 Acer truncatum HOM05D001194 ORTHO05D005909 1.1e-43 183.3 322 43.2
Lalb_Chr14g0372871 Lupinus albus HOM05D004845 ORTHO05D005957 1.8e-43 182.6 156 60.9
Mapoly0021s0057 Marchantia polymorpha HOM05D004845 ORTHO05D005957 4.4e-42 177.9 443 36.8
Medtr8g015610 Medicago truncatula HOM05D004845 ORTHO05D005957 1.7e-41 176.0 1055 26.4
Os03g0187100 Oryza sativa ssp. japonica HOM05D004845 ORTHO05D005957 4.2e-40 171.4 639 29.3
Pp3c12_1570 Physcomitrium patens HOM05D004845 ORTHO05D005957 2.3e-38 165.6 370 35.7
unitig_749.g14049 Utricularia gibba HOM05D004845 ORTHO05D005957 1.7e-30 139.4 105 60.0
BolC1t04240H Brassica oleracea HOM05D004845 ORTHO05D005957 2.3e-30 139.0 134 56.0
C01p42960 Brassica napus HOM05D004845 ORTHO05D005957 3.0e-30 138.7 121 61.2
SMO334G0114 Selaginella moellendorffii HOM05D004845 ORTHO05D005957 4.3e-29 134.8 434 33.2
Lalb_Chr14g0372881 Lupinus albus HOM05D004845 ORTHO05D005957 5.6e-29 134.4 998 30.4
HPP92_028293 Vanilla planifolia HOM05D004845 ORTHO05D005957 6.9e-27 127.5 178 41.0
AagrBONN_evm.TU.Sc2ySwM_344.5033 Anthoceros agrestis HOM05D004845 ORTHO05D005957 1.0e-22 113.6 1313 25.2
Ca_23298_v3 Cicer arietinum L. HOM05D004845 ORTHO05D005957 5.1e-22 111.3 170 43.5
SHI11164 Sapria himalayana HOM05D004845 ORTHO05D003034 6.7e-22 110.9 61 77.0
Ca_23296_v3 Cicer arietinum L. HOM05D004845 ORTHO05D005957 2.5e-21 109.0 203 41.4
Haze_15921 Corylus avellana HOM05D004845 ORTHO05D005957 1.1e-19 103.6 225 43.1
C01p42950 Brassica napus HOM05D004845 ORTHO05D005957 6.9e-19 100.9 154 38.3
CBR_g20996 Chara braunii HOM05D004845 ORTHO05D005957 2.5e-16 92.4 176 35.8
Actinidia32135 Actinidia chinensis HOM05D004845 ORTHO05D005957 1.6e-15 89.7 135 51.1
CBR_g20995 Chara braunii HOM05D004845 ORTHO05D005957 9.6e-13 80.5 120 40.8
PGSC0003DMG400002508 Solanum tuberosum HOM05D004845 ORTHO05D005957 9.6e-13 80.5 134 51.5
Zm00001eb424050 Zea mays HOM05D002942 ORTHO05D003270 2.1e-12 79.3 60 56.7
Cpa.g.sc131.32 Carica papaya HOM05D004845 ORTHO05D005957 6.9e-11 74.3 89 53.9
Medtr1g021875 Medicago truncatula HOM05D004845 ORTHO05D005957 1.3e-09 70.1 67 55.2
HPP92_028292 Vanilla planifolia HOM05D004845 ORTHO05D005957 6.7e-06 57.8 652 31.6


User provided reference genes

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