Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO170G6846 Papaver somniferum HOM05D005191 ORTHO05D006725 0.0e+00 1444.1 720 100.0
PSO017G2350 Papaver somniferum HOM05D005191 ORTHO05D006725 0.0e+00 1414.1 720 97.4
TAR625G1134 Trochodendron aralioides HOM05D005191 ORTHO05D006725 0.0e+00 1133.2 720 77.4
Aqoxy7G02403 Aquilegia oxysepala HOM05D005191 ORTHO05D006725 0.0e+00 1118.6 703 78.0
Nn2g12129 Nelumbo nucifera HOM05D005191 ORTHO05D006725 0.0e+00 1094.0 703 75.4
Cfa002299 Carpinus fangiana HOM05D005191 ORTHO05D006725 1.6e-308 1062.4 719 72.3
QL02p090053 Quercus lobata HOM05D005191 ORTHO05D006725 1.1e-306 1056.2 717 72.0
CiPaw.03G249200 Carya illinoinensis HOM05D005191 ORTHO05D006725 9.5e-306 1053.1 703 72.5
CSS0021683 Camellia sinensis var. sinensis HOM05D005191 ORTHO05D006725 1.2e-303 1046.2 723 71.5
Thecc.09G133700 Theobroma cacao HOM05D005191 ORTHO05D006725 2.0e-300 1035.4 703 71.1
Gorai.004G107900 Gossypium raimondii HOM05D005191 ORTHO05D006725 3.6e-297 1024.6 716 69.3
Potri.006G065000 Populus trichocarpa HOM05D005191 ORTHO05D006725 8.9e-296 1020.0 724 69.3
Gohir.A08G088900 Gossypium hirsutum HOM05D005191 ORTHO05D006725 1.2e-295 1019.6 703 70.1
Prupe.7G249300 Prunus persica HOM05D005191 ORTHO05D006725 1.7e-294 1015.8 717 69.9
TWI63G0111 Tripterygium wilfordii HOM05D005191 ORTHO05D006725 1.6e-292 1009.2 703 69.4
RcHm_v2.0_Chr2g0087561 Rosa chinensis HOM05D005191 ORTHO05D006725 3.3e-290 1001.5 703 69.1
Rhsim03G0251800 Rhododendron simsii HOM05D005191 ORTHO05D006725 9.5e-290 1000.0 754 66.3
Lj7A435G51 Lonicera japonica HOM05D005191 ORTHO05D006725 1.2e-289 999.6 725 68.8
CANSAT11G2540 Cannabis sativa HOM05D005191 ORTHO05D006725 2.8e-289 998.4 729 67.2
COL.COLO4_15579 Corchorus olitorius HOM05D005191 ORTHO05D006725 1.4e-288 996.1 703 69.7
TWI32G0152 Tripterygium wilfordii HOM05D005191 ORTHO05D006725 2.3e-288 995.3 703 68.3
Ciclev10007583m.g Citrus clementina HOM05D005191 ORTHO05D006725 6.8e-288 993.8 703 68.6
MD02G1022800 Malus domestica HOM05D005191 ORTHO05D006725 2.0e-287 992.3 703 68.6
MD15G1165500 Malus domestica HOM05D005191 ORTHO05D006725 7.6e-287 990.3 716 68.2
Sc18g0000280 Simmondsia chinensis HOM05D005191 ORTHO05D006725 1.3e-286 989.6 716 67.7
FvH4_1g02530 Fragaria vesca HOM05D005191 ORTHO05D006725 5.4e-285 984.2 703 68.3
FAN19G1407 Fragaria x ananassa HOM05D005191 ORTHO05D006725 1.6e-284 982.6 719 67.2
Glyma.17G110600 Glycine max HOM05D005191 ORTHO05D006725 2.1e-284 982.2 719 68.0
FAN23G0864 Fragaria x ananassa HOM05D005191 ORTHO05D006725 6.0e-284 980.7 703 68.0
FAN26G1428 Fragaria x ananassa HOM05D005191 ORTHO05D006725 6.0e-284 980.7 703 68.0
Potri.018G125171 Populus trichocarpa HOM05D005191 ORTHO05D006725 1.0e-283 979.9 703 69.0
Potri.T124807 Populus trichocarpa HOM05D005191 ORTHO05D006725 3.0e-283 978.4 703 68.8
CAN.G1663.1 Capsicum annuum HOM05D005191 ORTHO05D006725 2.5e-282 975.3 703 66.7
FAN28G1162 Fragaria x ananassa HOM05D005191 ORTHO05D006725 5.6e-282 974.2 714 66.9
Sopen07g001100 Solanum pennellii HOM05D005191 ORTHO05D006725 5.6e-282 974.2 721 65.2
Glyma.13G160800 Glycine max HOM05D005191 ORTHO05D006725 8.1e-281 970.3 704 68.9
Lalb_Chr12g0198261 Lupinus albus HOM05D005191 ORTHO05D006725 3.4e-279 964.9 722 66.1
ECA236G3625 Erigeron canadensis HOM05D005191 ORTHO05D006725 5.8e-279 964.1 704 66.6
Gohir.D08G100100 Gossypium hirsutum HOM05D005191 ORTHO05D006725 5.8e-279 964.1 673 69.1
Cc06_g08000 Coffea canephora HOM05D005191 ORTHO05D006725 1.3e-278 963.0 720 65.6
Cc06_g08010 Coffea canephora HOM05D005191 ORTHO05D006725 1.3e-278 963.0 720 65.6
AUR62013300 Chenopodium quinoa HOM05D005191 ORTHO05D006725 1.7e-278 962.6 708 67.5
Eucgr.E03534 Eucalyptus grandis HOM05D005191 ORTHO05D006725 1.7e-278 962.6 714 67.1
MSTRG.26350 Avicennia marina HOM05D005191 ORTHO05D006725 2.2e-278 962.2 721 66.0
Lsat_1_v5_gn_8_61061 Lactuca sativa HOM05D005191 ORTHO05D006725 5.4e-277 957.6 686 67.1
Migut.K00420 Erythranthe guttata HOM05D005191 ORTHO05D006725 2.1e-276 955.7 722 65.5
Phvul.003G169500 Phaseolus vulgaris HOM05D005191 ORTHO05D006725 2.1e-276 955.7 716 66.5
Nitab4.5_0000374g0090 Nicotiana tabacum HOM05D005191 ORTHO05D006725 4.6e-276 954.5 703 65.3
VMungo1215G2132 Vigna mungo HOM05D005191 ORTHO05D006725 6.0e-276 954.1 703 67.4
Sed0022210 Sechium edule HOM05D005191 ORTHO05D006725 5.1e-275 951.0 703 66.7
arahy.Tifrunner.gnm1.ann1.0L2UMW Arachis hypogaea HOM05D005191 ORTHO05D006725 1.6e-273 946.0 703 66.0
Cpa.g.sc46.51 Carica papaya HOM05D005191 ORTHO05D006725 4.8e-273 944.5 703 66.6
arahy.Tifrunner.gnm1.ann1.W0WM15 Arachis hypogaea HOM05D005191 ORTHO05D006725 8.1e-273 943.7 703 65.9
Solyc07g007810.3 Solanum lycopersicum HOM05D005191 ORTHO05D006725 5.3e-272 941.0 721 63.7
CsaV3_1G027890 Cucumis sativus L. HOM05D005191 ORTHO05D006725 9.0e-272 940.3 703 66.9
HanXRQChr05g0143851 Helianthus annuus HOM05D005191 ORTHO05D006725 3.4e-271 938.3 704 66.2
Lj4g0015768 Lotus japonicus HOM05D005191 ORTHO05D006725 5.8e-271 937.6 721 64.8
Manes.06G046300 Manihot esculenta HOM05D005191 ORTHO05D006725 2.2e-270 935.6 720 64.6
SGA_v2.0_scaffold63G21813 Striga asiatica HOM05D005191 ORTHO05D006725 2.2e-270 935.6 705 65.7
THA.LOC104826555 Tarenaya hassleriana HOM05D005191 ORTHO05D006725 6.4e-270 934.1 704 65.1
Peaxi162Scf00088g01225 Petunia axillaris HOM05D005191 ORTHO05D006725 1.1e-269 933.3 725 63.2
Sabra18G0106500 Salix brachista HOM05D005191 ORTHO05D006725 1.3e-267 926.4 727 64.2
ATR0800G098 Amborella trichopoda HOM05D005191 ORTHO05D006725 5.6e-266 921.0 661 68.2
Psat4g036440 Pisum sativum HOM05D005191 ORTHO05D006725 6.2e-265 917.5 713 64.4
Duzib150G0407 Durio zibethinus HOM05D005191 ORTHO05D006725 9.0e-264 913.7 709 64.7
ClCG06G011590 Citrullus lanatus HOM05D005191 ORTHO05D006725 5.8e-263 911.0 754 62.1
Dinv41468 Davidia involucrata HOM05D005191 ORTHO05D006725 3.8e-262 908.3 602 74.3
TPR.G7618 Trifolium pratense HOM05D005191 ORTHO05D006725 1.2e-260 903.3 710 63.1
EL10Ac8g18733 Beta vulgaris HOM05D005191 ORTHO05D006725 1.0e-259 900.2 829 56.6
AUR62011184 Chenopodium quinoa HOM05D005191 ORTHO05D006725 1.4e-256 889.8 720 63.2
Hund26552 Selenicereus undatus HOM05D005191 ORTHO05D006725 5.8e-255 884.4 716 62.3
A06p26710 Brassica napus HOM05D005191 ORTHO05D006725 1.5e-247 859.8 705 61.3
DCAR_009327 Daucus carota HOM05D005191 ORTHO05D006725 7.6e-247 857.4 715 61.8
Nitab4.5_0005159g0010 Nicotiana tabacum HOM05D005191 ORTHO05D006725 7.6e-247 857.4 615 65.5
PGR142G3543 Punica granatum HOM05D005191 ORTHO05D006725 1.1e-245 853.6 706 62.2
Aa31LG8G12200 Aethionema arabicum HOM05D005191 ORTHO05D006725 9.3e-245 850.5 704 61.1
BcaC01g02222 Brassica carinata HOM05D005191 ORTHO05D006725 3.6e-244 848.6 705 61.0
C03p67700 Brassica napus HOM05D005191 ORTHO05D006725 3.6e-244 848.6 705 61.0
BcaB02g10775 Brassica carinata HOM05D005191 ORTHO05D006725 8.7e-243 844.0 713 60.4
BolSC21t60229H Brassica oleracea HOM05D005191 ORTHO05D006725 5.7e-242 841.3 709 60.2
Sp3g26260 Schrenkiella parvula HOM05D005191 ORTHO05D006725 9.7e-242 840.5 704 59.7
Actinidia26371 Actinidia chinensis HOM05D005191 ORTHO05D006725 2.9e-238 828.9 703 61.2
AT2G11000 Arabidopsis thaliana HOM05D005191 ORTHO05D006725 2.9e-238 828.9 704 60.1
AL3G44790 Arabidopsis lyrata HOM05D005191 ORTHO05D006725 5.0e-238 828.2 706 60.2
Carub.0003s2755 Capsella rubella HOM05D005191 ORTHO05D006725 2.7e-236 822.4 704 59.5
Atru.chr7.1956 Acer truncatum HOM05D005191 ORTHO05D006725 1.1e-234 817.0 525 74.1
BraA06t25606Z Brassica rapa HOM05D005191 ORTHO05D006725 6.5e-230 801.2 723 57.8
Medtr4g115450 Medicago truncatula HOM05D005191 ORTHO05D006725 1.0e-227 793.9 590 65.8
SEGI_14008 Sequoiadendron giganteum HOM05D005191 ORTHO05D006725 2.1e-212 743.0 713 55.3
MELO3C010304.2 Cucumis melo HOM05D005191 ORTHO05D006725 3.5e-207 725.7 717 55.2
SalBow1G1849 Salvia bowleyana HOM05D005191 ORTHO05D006725 2.3e-203 713.0 622 56.9
Thhalv10022576m.g Eutrema salsugineum HOM05D005191 ORTHO05D006725 5.2e-203 711.8 609 58.9
GSVIVG01015604001 Vitis vinifera HOM05D005191 ORTHO05D006725 8.6e-198 694.5 474 71.1
Mapoly0005s0239 Marchantia polymorpha HOM05D005191 ORTHO05D006725 1.0e-190 671.0 745 48.6
vmacro06157 Vaccinium macrocarpon HOM05D005191 ORTHO05D006725 5.2e-187 658.7 466 70.2
Ah.14g079340 Amaranthus hybridus HOM05D005191 ORTHO05D006725 6.0e-183 645.2 474 65.6
Pp3c26_8550 Physcomitrium patens HOM05D005191 ORTHO05D006725 5.0e-182 642.1 729 47.1
HPP92_010843 Vanilla planifolia HOM05D005191 ORTHO05D006725 7.3e-181 638.3 447 68.5
Oeu052176.1 Olea europaea HOM05D005191 ORTHO05D006725 8.3e-177 624.8 473 62.6
CARHR104890 Cardamine hirsuta HOM05D005191 ORTHO05D006725 6.4e-169 598.6 441 67.1
Zm00001eb192130 Zea mays HOM05D005191 ORTHO05D006725 1.9e-165 587.0 420 68.1
AagrBONN_evm.TU.Sc2ySwM_344.2372 Anthoceros agrestis HOM05D005191 ORTHO05D006725 1.4e-160 570.9 689 45.7
Haze_25489 Corylus avellana HOM05D005191 ORTHO05D006725 3.0e-158 563.1 441 66.4
Hund26401 Selenicereus undatus HOM05D005191 ORTHO05D006725 1.7e-153 547.4 480 57.7
Ca_21665_v3 Cicer arietinum L. HOM05D005191 ORTHO05D006725 7.4e-149 531.9 384 68.0
Os02g0803250 Oryza sativa ssp. japonica HOM05D005191 ORTHO05D006725 1.4e-144 517.7 684 43.6
unitig_0.g2715 Utricularia gibba HOM05D005191 ORTHO05D006725 9.7e-133 478.4 414 60.6
CBR_g29413 Chara braunii HOM05D005191 ORTHO05D006725 4.1e-131 473.0 770 38.4
Haze_25491 Corylus avellana HOM05D005191 ORTHO05D006725 5.0e-129 466.1 381 60.9
SMO174G0034 Selaginella moellendorffii HOM05D005191 ORTHO05D006725 2.5e-125 453.8 736 38.0
CDE05G1862 Ceratophyllum demersum HOM05D005191 ORTHO05D006725 2.0e-122 444.1 362 64.4
Actinidia38723 Actinidia chinensis HOM05D005191 ORTHO05D006725 8.8e-110 402.1 294 70.4
Ca_06948_v3 Cicer arietinum L. HOM05D005191 ORTHO05D006725 1.3e-105 388.3 327 60.6
Sabra06G0047500 Salix brachista HOM05D005191 ORTHO05D006725 1.7e-105 387.9 308 62.0
GSVIVG01002648001 Vitis vinifera HOM05D005191 ORTHO05D006725 1.7e-81 308.1 185 80.5
vmacro06156 Vaccinium macrocarpon HOM05D005191 ORTHO05D006725 4.0e-70 270.4 245 56.3
Psat6g224720 Pisum sativum HOM05D005191 ORTHO05D006725 1.1e-67 262.3 200 64.0
CDE05G1976 Ceratophyllum demersum HOM05D005191 ORTHO05D006725 1.5e-48 198.7 157 60.5
FAN06G0842 Fragaria x ananassa HOM05D005191 ORTHO05D006725 1.6e-47 195.3 315 39.4
Rhsim13G0106800 Rhododendron simsii HOM05D005191 ORTHO05D006725 4.3e-40 170.6 143 64.3
unitig_0.g2716 Utricularia gibba HOM05D005191 ORTHO05D006725 2.2e-36 158.3 150 55.3
PRCOL_00001705 Prasinoderma coloniale HOM05D005191 ORTHO05D006725 1.9e-32 145.2 549 26.2
Cre06.g300650 Chlamydomonas reinhardtii HOM05D005191 ORTHO05D006725 2.5e-32 144.8 821 23.3
Actinidia38722 Actinidia chinensis HOM05D005191 ORTHO05D006725 7.4e-32 143.3 162 48.1
TPR.G8947 Trifolium pratense HOM05D005191 ORTHO05D006725 4.8e-31 140.6 90 74.4
Nitab4.5_0005159g0020 Nicotiana tabacum HOM05D005191 ORTHO05D006725 2.6e-29 134.8 107 65.4
FAN06G5005 Fragaria x ananassa HOM05D005191 ORTHO05D006725 1.7e-28 132.1 267 33.7
RcHm_v2.0_Chr5g0051701 Rosa chinensis HOM05D005191 ORTHO05D006725 8.7e-25 119.8 123 51.2
FvH4_7g23890 Fragaria vesca HOM05D005191 ORTHO05D006725 1.9e-24 118.6 150 45.3
FAN10G2766 Fragaria x ananassa HOM05D005191 ORTHO05D006725 3.7e-23 114.4 83 68.7
FAN10G4062 Fragaria x ananassa HOM05D005191 ORTHO05D006725 9.0e-22 109.8 126 50.8
FAN26G2291 Fragaria x ananassa HOM05D005191 ORTHO05D006725 5.8e-21 107.1 88 60.2
MBI13_g29624_MAGBIO Magnolia biondii HOM05D005191 ORTHO05D006725 1.3e-20 105.9 64 76.6
FAN15G1193 Fragaria x ananassa HOM05D002169 ORTHO05D006927 6.7e-17 93.6 74 60.8
Rhsim05G0138400 Rhododendron simsii HOM05D005191 ORTHO05D006725 8.2e-15 86.7 122 49.2
FvH4_1g29180 Fragaria vesca HOM05D005191 ORTHO05D025363 7.2e-11 73.6 51 68.6
GSVIVG01012804001 Vitis vinifera HOM05D005191 ORTHO05D006725 1.0e-09 69.7 56 60.7
Rhsim10G0150400 Rhododendron simsii HOM05D005191 ORTHO05D030537 1.4e-09 69.3 52 65.4
COL.COLO4_23752 Corchorus olitorius HOM05D005191 ORTHO05D016248 5.1e-09 67.4 62 59.7
COL.COLO4_21409 Corchorus olitorius HOM05D005191 ORTHO05D016248 1.7e-07 62.4 57 61.4
Sp3g26280 Schrenkiella parvula HOM05D005191 ORTHO05D012938 8.2e-07 60.1 39 69.2


User provided reference genes

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