Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO170G6838 Papaver somniferum HOM05D004174 ORTHO05D004624 5.6e-253 877.1 432 100.0
PSO455G0049 Papaver somniferum HOM05D004174 ORTHO05D004624 2.5e-245 851.7 434 97.0
Nn8g39387 Nelumbo nucifera HOM05D004174 ORTHO05D004624 3.8e-169 598.6 406 72.2
TAR383G0558 Trochodendron aralioides HOM05D004174 ORTHO05D004624 1.2e-167 593.6 397 74.6
Aqoxy7G02096 Aquilegia oxysepala HOM05D004174 ORTHO05D004624 1.6e-167 593.2 422 72.3
RcHm_v2.0_Chr2g0089131 Rosa chinensis HOM05D004174 ORTHO05D004624 8.9e-166 587.4 405 73.3
Dinv36548 Davidia involucrata HOM05D004174 ORTHO05D004624 1.2e-165 587.0 388 75.3
Prupe.7G239600 Prunus persica HOM05D004174 ORTHO05D004624 1.2e-165 587.0 410 72.2
CiPaw.03G241700 Carya illinoinensis HOM05D004174 ORTHO05D004624 2.0e-165 586.3 417 71.2
TWI34G0924 Tripterygium wilfordii HOM05D004174 ORTHO05D004624 2.8e-164 582.4 422 71.1
Cfa003346 Carpinus fangiana HOM05D004174 ORTHO05D004624 4.9e-164 581.6 424 70.8
MD02G1035600 Malus domestica HOM05D004174 ORTHO05D004624 1.4e-163 580.1 400 72.0
Thecc.09G123000 Theobroma cacao HOM05D004174 ORTHO05D004624 1.8e-163 579.7 432 70.1
FAN19G0954 Fragaria x ananassa HOM05D004174 ORTHO05D004624 2.4e-163 579.3 421 69.8
FvH4_1g03600 Fragaria vesca HOM05D004174 ORTHO05D004624 3.1e-163 578.9 421 69.8
Oeu058056.1 Olea europaea HOM05D004174 ORTHO05D004624 9.2e-163 577.4 388 71.9
FAN28G1355 Fragaria x ananassa HOM05D004174 ORTHO05D004624 2.7e-162 575.9 405 71.6
FAN23G0992 Fragaria x ananassa HOM05D004174 ORTHO05D004624 3.5e-162 575.5 415 70.4
Nitab4.5_0006698g0010 Nicotiana tabacum HOM05D004174 ORTHO05D004624 7.8e-162 574.3 423 69.5
MD00G1107300 Malus domestica HOM05D004174 ORTHO05D004624 3.9e-161 572.0 411 70.3
Haze_25614 Corylus avellana HOM05D004174 ORTHO05D004624 6.6e-161 571.2 390 73.3
Aa31LG8G2170 Aethionema arabicum HOM05D004174 ORTHO05D004624 1.1e-160 570.5 423 68.1
Gohir.D13G204700 Gossypium hirsutum HOM05D004174 ORTHO05D004624 1.5e-160 570.1 435 68.0
Atru.chr7.1197 Acer truncatum HOM05D004174 ORTHO05D004624 1.9e-160 569.7 407 69.8
Cc06_g08790 Coffea canephora HOM05D004174 ORTHO05D004624 1.9e-160 569.7 396 71.5
Gohir.A13G199200 Gossypium hirsutum HOM05D004174 ORTHO05D004624 1.9e-160 569.7 414 70.3
Migut.J01169 Erythranthe guttata HOM05D004174 ORTHO05D004624 2.5e-160 569.3 394 70.6
ClCG11G002850 Citrullus lanatus HOM05D004174 ORTHO05D004624 3.3e-160 568.9 398 70.6
Ciclev10008313m.g Citrus clementina HOM05D004174 ORTHO05D004624 4.3e-160 568.5 421 67.9
Carub.0006s1845 Capsella rubella HOM05D004174 ORTHO05D004624 5.6e-160 568.2 422 67.8
MSTRG.19607 Avicennia marina HOM05D004174 ORTHO05D004624 7.3e-160 567.8 388 70.9
Nitab4.5_0000106g0230 Nicotiana tabacum HOM05D004174 ORTHO05D004624 7.3e-160 567.8 423 67.8
COL.COLO4_05761 Corchorus olitorius HOM05D004174 ORTHO05D004624 9.5e-160 567.4 398 71.6
Hma1.2p1_0665F.1_g199150 Hydrangea macrophylla HOM05D004174 ORTHO05D004624 9.5e-160 567.4 401 71.3
Thhalv10013566m.g Eutrema salsugineum HOM05D004174 ORTHO05D004624 1.2e-159 567.0 401 68.6
Gorai.013G233600 Gossypium raimondii HOM05D004174 ORTHO05D004624 1.6e-159 566.6 435 67.8
QL02p087765 Quercus lobata HOM05D004174 ORTHO05D004624 2.1e-159 566.2 389 73.0
AL6G31620 Arabidopsis lyrata HOM05D004174 ORTHO05D004624 2.8e-159 565.8 421 68.2
CARHR192760 Cardamine hirsuta HOM05D004174 ORTHO05D004624 2.8e-159 565.8 413 67.6
Potri.006G154200 Populus trichocarpa HOM05D004174 ORTHO05D004624 2.8e-159 565.8 389 72.0
BcaC03g13730 Brassica carinata HOM05D004174 ORTHO05D004624 3.6e-159 565.5 390 70.5
FAN26G3217 Fragaria x ananassa HOM05D004174 ORTHO05D004624 8.0e-159 564.3 413 69.5
Eucgr.C04181 Eucalyptus grandis HOM05D004174 ORTHO05D004624 1.0e-158 563.9 392 71.4
PGSC0003DMG400024321 Solanum tuberosum HOM05D004174 ORTHO05D004624 1.0e-158 563.9 391 71.9
Peaxi162Scf02490g00007 Petunia axillaris HOM05D004174 ORTHO05D004624 1.8e-158 563.1 398 69.8
Manes.14G130500 Manihot esculenta HOM05D004174 ORTHO05D004624 3.1e-158 562.4 420 68.6
Potri.018G070400 Populus trichocarpa HOM05D004174 ORTHO05D004624 3.1e-158 562.4 400 69.8
vmacro06177 Vaccinium macrocarpon HOM05D004174 ORTHO05D004624 3.1e-158 562.4 420 68.3
THA.LOC104811038 Tarenaya hassleriana HOM05D004174 ORTHO05D004624 5.2e-158 561.6 398 68.8
AT5G20070 Arabidopsis thaliana HOM05D004174 ORTHO05D004624 8.9e-158 560.8 423 65.7
BcaB05g22875 Brassica carinata HOM05D004174 ORTHO05D004624 1.5e-157 560.1 389 69.7
MBI04_g24208_MAGBIO Magnolia biondii HOM05D004174 ORTHO05D004624 1.5e-157 560.1 420 68.8
Hund09144 Selenicereus undatus HOM05D004174 ORTHO05D004624 1.5e-157 560.1 395 70.4
Duzib150G0384 Durio zibethinus HOM05D004174 ORTHO05D004624 2.6e-157 559.3 395 70.9
A02p06020 Brassica napus HOM05D004174 ORTHO05D004624 4.4e-157 558.5 390 70.0
BraA02t05553Z Brassica rapa HOM05D004174 ORTHO05D004624 4.4e-157 558.5 390 70.0
Sopen06g031500 Solanum pennellii HOM05D004174 ORTHO05D004624 4.4e-157 558.5 425 68.0
Sp6g24340 Schrenkiella parvula HOM05D004174 ORTHO05D004624 5.8e-157 558.1 402 67.7
MELO3C004525.2 Cucumis melo HOM05D004174 ORTHO05D004624 9.8e-157 557.4 398 69.3
CsaV3_2G002690 Cucumis sativus L. HOM05D004174 ORTHO05D004624 9.8e-157 557.4 398 69.1
Manes.06G050000 Manihot esculenta HOM05D004174 ORTHO05D004624 9.8e-157 557.4 420 67.9
Actinidia07434 Actinidia chinensis HOM05D004174 ORTHO05D004624 1.3e-156 557.0 419 67.5
EL10Ac8g18616 Beta vulgaris HOM05D004174 ORTHO05D004624 1.3e-156 557.0 418 67.5
SalBow3G2402 Salvia bowleyana HOM05D004174 ORTHO05D004624 2.2e-156 556.2 402 68.7
PGR102G0881 Punica granatum HOM05D004174 ORTHO05D004624 3.7e-156 555.4 434 64.5
Solyc06g075080.4 Solanum lycopersicum HOM05D004174 ORTHO05D004624 6.4e-156 554.7 425 67.8
TWI32G1270 Tripterygium wilfordii HOM05D004174 ORTHO05D004624 8.3e-156 554.3 423 67.8
Actinidia26403 Actinidia chinensis HOM05D004174 ORTHO05D004624 1.4e-155 553.5 425 66.6
BcaB01g04811 Brassica carinata HOM05D004174 ORTHO05D004624 2.4e-155 552.7 425 66.1
Duzib187G0531 Durio zibethinus HOM05D004174 ORTHO05D004624 9.2e-155 550.8 417 68.8
THA.LOC104799651 Tarenaya hassleriana HOM05D004174 ORTHO05D004624 9.2e-155 550.8 398 67.6
COL.COLO4_17917 Corchorus olitorius HOM05D004174 ORTHO05D004624 2.0e-154 549.7 395 71.6
Sabra18G0061500 Salix brachista HOM05D004174 ORTHO05D004624 2.7e-154 549.3 427 66.3
BolC3t13612H Brassica oleracea HOM05D004174 ORTHO05D004624 3.5e-154 548.9 427 64.6
Psat1g025760 Pisum sativum HOM05D004174 ORTHO05D004624 4.6e-154 548.5 414 68.8
Ca_03159_v3 Cicer arietinum L. HOM05D004174 ORTHO05D004624 7.8e-154 547.7 410 68.0
Sed0019119 Sechium edule HOM05D004174 ORTHO05D004624 7.8e-154 547.7 388 70.6
CANSAT11G0280 Cannabis sativa HOM05D004174 ORTHO05D004624 1.0e-153 547.4 420 68.3
Sc18g0000710 Simmondsia chinensis HOM05D004174 ORTHO05D004624 1.7e-153 546.6 395 69.4
Lalb_Chr23g0275331 Lupinus albus HOM05D004174 ORTHO05D004624 3.0e-153 545.8 417 66.2
A03p09800 Brassica napus HOM05D004174 ORTHO05D004624 3.9e-153 545.4 420 66.4
BraA03t10295Z Brassica rapa HOM05D004174 ORTHO05D004624 3.9e-153 545.4 420 66.4
BNapus_Darmor_BZH_scaffold_38p01820 Brassica napus HOM05D004174 ORTHO05D004624 6.6e-153 544.7 390 68.7
C03p11380 Brassica napus HOM05D004174 ORTHO05D004624 1.5e-152 543.5 427 64.4
HanXRQChr12g0368841 Helianthus annuus HOM05D004174 ORTHO05D004624 1.9e-152 543.1 422 65.6
SGA_v2.0_scaffold229G43324 Striga asiatica HOM05D004174 ORTHO05D004624 7.3e-152 541.2 417 65.5
CSS0035220 Camellia sinensis var. sinensis HOM05D004174 ORTHO05D004624 9.5e-152 540.8 364 74.7
Lj1g0010752 Lotus japonicus HOM05D004174 ORTHO05D004624 9.5e-152 540.8 393 69.2
CAN.G1966.1 Capsicum annuum HOM05D004174 ORTHO05D004624 1.2e-151 540.4 410 65.6
Medtr2g054680 Medicago truncatula HOM05D004174 ORTHO05D004624 2.1e-151 539.7 393 70.0
DCAR_017828 Daucus carota HOM05D004174 ORTHO05D004624 6.2e-151 538.1 385 68.8
TPR.G31095 Trifolium pratense HOM05D004174 ORTHO05D004624 3.1e-150 535.8 396 69.9
Lsat_1_v5_gn_8_58900 Lactuca sativa HOM05D004174 ORTHO05D004624 9.8e-149 530.8 389 67.9
Phvul.009G197200 Phaseolus vulgaris HOM05D004174 ORTHO05D004624 5.4e-147 525.0 416 65.4
VMungo1309G2067 Vigna mungo HOM05D004174 ORTHO05D004624 3.5e-146 522.3 419 65.2
Glyma.06G216700 Glycine max HOM05D004174 ORTHO05D004624 7.8e-146 521.2 430 65.3
HanXRQChr06g0180241 Helianthus annuus HOM05D004174 ORTHO05D004624 3.0e-145 519.2 398 63.6
MD15G1175700 Malus domestica HOM05D004174 ORTHO05D004624 9.5e-144 514.2 463 60.9
HanXRQChr03g0062501 Helianthus annuus HOM05D004174 ORTHO05D004624 1.2e-143 513.8 393 65.1
Rhsim03G0246500 Rhododendron simsii HOM05D004174 ORTHO05D004624 6.8e-142 508.1 344 72.1
MELO3C026643.2 Cucumis melo HOM05D004174 ORTHO05D004624 8.9e-142 507.7 402 64.7
Gohir.D08G260000 Gossypium hirsutum HOM05D004174 ORTHO05D004624 1.2e-141 507.3 391 66.5
Lsat_1_v5_gn_7_42401 Lactuca sativa HOM05D004174 ORTHO05D004624 3.4e-141 505.8 395 63.0
Gorai.004G277900 Gossypium raimondii HOM05D004174 ORTHO05D004624 9.9e-141 504.2 397 66.0
ATR1156G006 Amborella trichopoda HOM05D004174 ORTHO05D004624 1.7e-140 503.4 428 61.7
DCAR_009201 Daucus carota HOM05D004174 ORTHO05D004624 1.9e-139 500.0 397 64.2
Psat4g040360 Pisum sativum HOM05D004174 ORTHO05D004624 3.2e-139 499.2 386 64.5
Lalb_Chr08g0234871 Lupinus albus HOM05D004174 ORTHO05D004624 9.2e-139 497.7 389 65.3
HPP92_000685 Vanilla planifolia HOM05D004174 ORTHO05D004624 1.6e-138 496.9 391 65.7
HPP92_000661 Vanilla planifolia HOM05D004174 ORTHO05D004624 6.0e-138 495.0 399 64.4
CDE02G3646 Ceratophyllum demersum HOM05D004174 ORTHO05D004624 7.8e-138 494.6 390 64.4
Medtr4g113990 Medicago truncatula HOM05D004174 ORTHO05D004624 1.3e-137 493.8 384 64.1
TPR.G10694 Trifolium pratense HOM05D004174 ORTHO05D004624 3.9e-137 492.3 397 62.7
Glyma.17G116600 Glycine max HOM05D004174 ORTHO05D004624 1.1e-136 490.7 402 61.4
Lalb_Chr07g0178801 Lupinus albus HOM05D004174 ORTHO05D004624 4.3e-136 488.8 391 63.2
ECA240G3275 Erigeron canadensis HOM05D004174 ORTHO05D004624 5.6e-136 488.4 350 67.1
arahy.Tifrunner.gnm1.ann1.SBVG8E Arachis hypogaea HOM05D004174 ORTHO05D004624 1.6e-135 486.9 422 58.8
VMungo1215G2625 Vigna mungo HOM05D004174 ORTHO05D004624 3.6e-135 485.7 393 63.1
GSVIVG01015501001 Vitis vinifera HOM05D004174 ORTHO05D004624 3.6e-135 485.7 293 79.5
Zm00001eb377430 Zea mays HOM05D004174 ORTHO05D004624 2.4e-134 483.0 406 61.8
Phvul.003G162700 Phaseolus vulgaris HOM05D004174 ORTHO05D004624 1.2e-133 480.7 392 62.0
arahy.Tifrunner.gnm1.ann1.E6UBTJ Arachis hypogaea HOM05D004174 ORTHO05D004624 2.0e-133 479.9 434 57.6
AUR62033476 Chenopodium quinoa HOM05D004174 ORTHO05D004624 5.8e-133 478.4 432 60.9
Sed0008859 Sechium edule HOM05D004174 ORTHO05D004624 1.4e-131 473.8 389 62.0
Os06g0141166 Oryza sativa ssp. japonica HOM05D004174 ORTHO05D004624 3.3e-128 462.6 415 58.6
Dinv41532 Davidia involucrata HOM05D004174 ORTHO05D004624 6.9e-126 454.9 354 65.8
SEGI_17043 Sequoiadendron giganteum HOM05D004174 ORTHO05D004624 9.3e-123 444.5 390 58.7
FAN26G0665 Fragaria x ananassa HOM05D004174 ORTHO05D004624 1.0e-121 441.0 242 84.7
ClCG06G010920 Citrullus lanatus HOM05D004174 ORTHO05D004624 2.5e-120 436.4 423 54.8
Ah.02g124290 Amaranthus hybridus HOM05D004174 ORTHO05D004624 1.0e-108 397.9 235 77.9
Ah.14g080300 Amaranthus hybridus HOM05D004174 ORTHO05D004624 1.0e-108 397.9 232 78.9
Lj7A632G45 Lonicera japonica HOM05D004174 ORTHO05D004624 4.8e-103 379.0 287 69.0
Gohir.A08G239300 Gossypium hirsutum HOM05D004174 ORTHO05D004624 4.5e-93 345.9 286 65.0
AagrBONN_evm.TU.Sc2ySwM_368.699 Anthoceros agrestis HOM05D004174 ORTHO05D004624 2.5e-91 340.1 251 63.7
SEGI_09002 Sequoiadendron giganteum HOM05D004174 ORTHO05D004624 4.2e-91 339.3 273 58.2
Lj4A460T58 Lonicera japonica HOM05D004174 ORTHO05D004624 3.0e-89 333.2 234 67.5
Pp3c3_2090 Physcomitrium patens HOM05D004174 ORTHO05D004624 8.8e-89 331.6 398 46.7
Mapoly0103s0044 Marchantia polymorpha HOM05D004174 ORTHO05D004624 4.3e-88 329.3 422 45.0
SMO169G0291 Selaginella moellendorffii HOM05D004174 ORTHO05D004624 9.7e-88 328.2 250 62.8
Lj4g0002160 Lotus japonicus HOM05D004174 ORTHO05D004624 1.8e-86 323.9 292 57.9
AUR62030487 Chenopodium quinoa HOM05D004174 ORTHO05D004624 2.0e-77 293.9 172 83.1
AUR62011109 Chenopodium quinoa HOM05D004174 ORTHO05D004624 1.0e-73 281.6 182 77.5
Glyma.05G008302 Glycine max HOM05D004174 ORTHO05D004624 3.4e-64 250.0 160 73.8
SEGI_03330 Sequoiadendron giganteum HOM05D004174 ORTHO05D004624 1.9e-59 234.2 286 44.8
BolC2t07007H Brassica oleracea HOM05D004174 ORTHO05D004624 3.5e-53 213.4 206 53.4
AUR62015314 Chenopodium quinoa HOM05D004174 ORTHO05D004624 5.0e-44 183.0 164 57.9
Cre09.g396900 Chlamydomonas reinhardtii HOM05D004174 ORTHO05D004624 1.6e-42 177.9 227 41.9
Cpa.g.sc648.3 Carica papaya HOM05D004174 ORTHO05D004624 3.6e-42 176.8 189 52.9
Cc11_g15180 Coffea canephora HOM05D004174 ORTHO05D004624 2.3e-41 174.1 103 80.6
AUR62011090 Chenopodium quinoa HOM05D003948 ORTHO05D004610 6.0e-37 159.5 207 49.3
Ah.14g080310 Amaranthus hybridus HOM05D004174 ORTHO05D004624 2.3e-36 157.5 189 50.3
MD02G1035400 Malus domestica HOM05D004174 ORTHO05D004624 4.3e-35 153.3 82 85.4
Haze_27339 Corylus avellana HOM05D004174 ORTHO05D004624 2.8e-34 150.6 156 51.3
SEGI_13131 Sequoiadendron giganteum HOM05D004174 ORTHO05D004624 6.2e-34 149.4 299 36.1
Cfa023976 Carpinus fangiana HOM05D003934 ORTHO05D005108 8.9e-33 145.6 429 29.1
Pp3c14_12120 Physcomitrium patens HOM05D004174 ORTHO05D004624 2.4e-30 137.5 249 36.1
Sabra06G0122300 Salix brachista HOM05D004174 ORTHO05D004624 1.0e-28 132.1 249 39.0
MCO10G159 Micromonas commoda HOM05D004174 ORTHO05D004624 3.3e-27 127.1 274 32.1
Lj4C460T3 Lonicera japonica HOM05D004174 ORTHO05D004624 5.6e-27 126.3 77 75.3
Mapoly0019s0154 Marchantia polymorpha HOM05D004174 ORTHO05D004624 3.6e-26 123.6 291 32.3
Ah.12g053390 Amaranthus hybridus HOM05D004174 ORTHO05D004624 5.8e-24 116.3 68 76.5
Ah.12g055680 Amaranthus hybridus HOM05D004174 ORTHO05D004624 1.3e-23 115.2 68 76.5
Ah.05g171270 Amaranthus hybridus HOM05D004174 ORTHO05D004624 2.9e-23 114.0 68 75.0
CBR_g46446 Chara braunii HOM05D004174 ORTHO05D004624 1.0e-20 105.5 247 30.8
PRCOL_00006603 Prasinoderma coloniale HOM05D004174 ORTHO05D004624 8.6e-20 102.4 205 33.2
VMungo0647G2130 Vigna mungo HOM05D004174 ORTHO05D004624 1.2e-18 98.6 146 40.4
Cre13.g582476 Chlamydomonas reinhardtii HOM05D004174 ORTHO05D004624 4.6e-13 80.1 94 47.9
VMungo1215G0447 Vigna mungo HOM05D006361 ORTHO05D007824 9.6e-11 72.4 67 49.3
SMO141G0190 Selaginella moellendorffii HOM05D004174 ORTHO05D004624 3.6e-10 70.5 119 39.5
Ah.12g053410 Amaranthus hybridus HOM05D004174 ORTHO05D004624 1.1e-09 68.9 38 78.9
BcaNung04410 Brassica carinata HOM05D005723 ORTHO05D005968 1.9e-06 58.2 181 27.1
A05p02710 Brassica napus HOM05D005723 ORTHO05D005968 2.4e-06 57.8 185 26.5
MD12G1056700 Malus domestica HOM05D005723 ORTHO05D005968 9.3e-06 55.8 168 28.6
Sp4g24280 Schrenkiella parvula HOM05D005723 ORTHO05D005968 9.3e-06 55.8 144 28.5


User provided reference genes

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