Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO170G6378 Papaver somniferum HOM05D005310 ORTHO05D006920 2.9e-57 224.9 107 100.0
PSO210G5690 Papaver somniferum HOM05D005310 ORTHO05D006920 1.2e-26 123.2 77 76.6
RcHm_v2.0_Chr5g0011651 Rosa chinensis HOM05D005310 ORTHO05D006920 3.4e-18 95.1 76 61.8
Atru.chr10.1571 Acer truncatum HOM05D005310 ORTHO05D006920 5.8e-18 94.4 77 59.7
Nn3g21104 Nelumbo nucifera HOM05D005310 ORTHO05D006920 5.8e-18 94.4 77 59.7
TAR627G0081 Trochodendron aralioides HOM05D005310 ORTHO05D006920 7.6e-18 94.0 77 58.4
Gohir.D06G138800 Gossypium hirsutum HOM05D005310 ORTHO05D006920 1.7e-17 92.8 77 58.4
Eucgr.E02785 Eucalyptus grandis HOM05D005310 ORTHO05D006920 2.2e-17 92.4 77 55.8
Gohir.A06G133700 Gossypium hirsutum HOM05D005310 ORTHO05D006920 2.2e-17 92.4 77 58.4
Thhalv10024714m.g Eutrema salsugineum HOM05D005310 ORTHO05D006920 2.9e-17 92.0 77 55.8
Lj4g0024191 Lotus japonicus HOM05D005310 ORTHO05D006920 2.9e-17 92.0 76 56.6
CiPaw.09G137200 Carya illinoinensis HOM05D005310 ORTHO05D006920 3.8e-17 91.7 77 61.0
Lj1A1175T55 Lonicera japonica HOM05D005310 ORTHO05D006920 3.8e-17 91.7 77 55.8
GSVIVG01021256001 Vitis vinifera HOM05D005310 ORTHO05D006920 3.8e-17 91.7 77 57.1
Cc02_g15590 Coffea canephora HOM05D005310 ORTHO05D006920 6.4e-17 90.9 77 54.5
COL.COLO4_31237 Corchorus olitorius HOM05D005310 ORTHO05D006920 6.4e-17 90.9 77 58.4
Duzib192G0594 Durio zibethinus HOM05D005310 ORTHO05D006920 6.4e-17 90.9 77 58.4
C01p12850 Brassica napus HOM05D005310 ORTHO05D006920 8.4e-17 90.5 77 55.8
Carub.0007s2242 Capsella rubella HOM05D005310 ORTHO05D006920 8.4e-17 90.5 77 57.1
CAN.G411.52 Capsicum annuum HOM05D005310 ORTHO05D006920 8.4e-17 90.5 77 57.1
Dinv32338 Davidia involucrata HOM05D005310 ORTHO05D006920 8.4e-17 90.5 77 54.5
Oeu040921.3 Olea europaea HOM05D005310 ORTHO05D006920 8.4e-17 90.5 77 59.7
THA.LOC104806167 Tarenaya hassleriana HOM05D005310 ORTHO05D006920 8.4e-17 90.5 77 55.8
Gorai.010G161400 Gossypium raimondii HOM05D005310 ORTHO05D006920 1.1e-16 90.1 77 57.1
Solyc02g072160.4 Solanum lycopersicum HOM05D005310 ORTHO05D006920 1.1e-16 90.1 77 55.8
Aqoxy1G01994 Aquilegia oxysepala HOM05D005310 ORTHO05D006920 1.4e-16 89.7 76 57.9
Ciclev10018335m.g Citrus clementina HOM05D005310 ORTHO05D006920 1.4e-16 89.7 77 57.1
Haze_05380 Corylus avellana HOM05D005310 ORTHO05D006920 1.4e-16 89.7 77 58.4
Dinv12753 Davidia involucrata HOM05D005310 ORTHO05D006920 1.4e-16 89.7 77 57.1
FAN11G0629 Fragaria x ananassa HOM05D005310 ORTHO05D006920 1.4e-16 89.7 76 59.2
FAN21G2773 Fragaria x ananassa HOM05D005310 ORTHO05D006920 1.4e-16 89.7 76 59.2
AL7G35440 Arabidopsis lyrata HOM05D005310 ORTHO05D006920 1.9e-16 89.4 77 54.5
AT4G18810 Arabidopsis thaliana HOM05D005310 ORTHO05D006920 1.9e-16 89.4 77 54.5
BolC1t01261H Brassica oleracea HOM05D005310 ORTHO05D006920 1.9e-16 89.4 77 55.8
FvH4_3g07310 Fragaria vesca HOM05D005310 ORTHO05D006920 1.9e-16 89.4 76 59.2
FAN16G3592 Fragaria x ananassa HOM05D005310 ORTHO05D006920 1.9e-16 89.4 76 59.2
MD00G1009300 Malus domestica HOM05D005310 ORTHO05D006920 1.9e-16 89.4 76 56.6
MD05G1295400 Malus domestica HOM05D005310 ORTHO05D006920 1.9e-16 89.4 76 56.6
TWI53G0456 Tripterygium wilfordii HOM05D005310 ORTHO05D006920 1.9e-16 89.4 77 57.1
A01p10840 Brassica napus HOM05D005310 ORTHO05D006920 2.4e-16 89.0 77 54.5
BraA01t01031Z Brassica rapa HOM05D005310 ORTHO05D006920 2.4e-16 89.0 77 54.5
Nitab4.5_0000437g0070 Nicotiana tabacum HOM05D005310 ORTHO05D006920 2.4e-16 89.0 77 54.5
Sp7g17520 Schrenkiella parvula HOM05D005310 ORTHO05D006920 2.4e-16 89.0 77 53.2
Cpa.g.sc7.109 Carica papaya HOM05D005310 ORTHO05D006920 3.2e-16 88.6 77 53.2
Prupe.4G066900 Prunus persica HOM05D005310 ORTHO05D006920 3.2e-16 88.6 76 56.6
Sopen02g021140 Solanum pennellii HOM05D005310 ORTHO05D006920 3.2e-16 88.6 77 54.5
vmacro16023 Vaccinium macrocarpon HOM05D005310 ORTHO05D006920 3.2e-16 88.6 77 54.5
Hma1.2p1_2416F.1_g321730 Hydrangea macrophylla HOM05D005310 ORTHO05D006920 4.2e-16 88.2 76 60.5
Hma1.2p1_2416F.1_g321740 Hydrangea macrophylla HOM05D005310 ORTHO05D006920 4.2e-16 88.2 76 60.5
Aa31LG6G1520 Aethionema arabicum HOM05D005310 ORTHO05D006920 5.5e-16 87.8 77 54.5
Ca_17897_v3 Cicer arietinum L. HOM05D005310 ORTHO05D006920 7.1e-16 87.4 76 53.9
ATR0012G016 Amborella trichopoda HOM05D005310 ORTHO05D006920 9.3e-16 87.0 77 53.2
CARHR225670 Cardamine hirsuta HOM05D005310 ORTHO05D006920 9.3e-16 87.0 77 54.5
Sed0028201 Sechium edule HOM05D005310 ORTHO05D006920 9.3e-16 87.0 77 54.5
Sc05g0006870 Simmondsia chinensis HOM05D005310 ORTHO05D006920 9.3e-16 87.0 76 55.3
Actinidia02744 Actinidia chinensis HOM05D005310 ORTHO05D006920 1.2e-15 86.7 77 57.1
Actinidia07651 Actinidia chinensis HOM05D005310 ORTHO05D006920 1.2e-15 86.7 77 57.1
MELO3C002677.2 Cucumis melo HOM05D005310 ORTHO05D006920 1.2e-15 86.7 77 54.5
Manes.16G042900 Manihot esculenta HOM05D005310 ORTHO05D006920 1.2e-15 86.7 77 54.5
Nitab4.5_0005937g0010 Nicotiana tabacum HOM05D005310 ORTHO05D006920 1.2e-15 86.7 77 53.2
Psat7g068720 Pisum sativum HOM05D005310 ORTHO05D006920 1.2e-15 86.7 76 53.9
QL05p049965 Quercus lobata HOM05D005310 ORTHO05D006920 1.2e-15 86.7 76 57.9
Peaxi162Scf00202g01112 Petunia axillaris HOM05D005310 ORTHO05D006920 1.6e-15 86.3 77 53.2
TPR.G6733 Trifolium pratense HOM05D005310 ORTHO05D006920 1.6e-15 86.3 76 53.9
CsaV3_1G033090 Cucumis sativus L. HOM05D005310 ORTHO05D006920 2.1e-15 85.9 77 54.5
PGSC0003DMG400028420 Solanum tuberosum HOM05D005310 ORTHO05D006920 2.1e-15 85.9 77 53.2
Medtr8g087310 Medicago truncatula HOM05D005310 ORTHO05D006920 2.7e-15 85.5 76 53.9
Rhsim02G0147000 Rhododendron simsii HOM05D005310 ORTHO05D006920 3.5e-15 85.1 77 54.5
RcHm_v2.0_Chr0c19g0500071 Rosa chinensis HOM05D005310 ORTHO05D006920 3.5e-15 85.1 71 59.2
VMungo0251G0247 Vigna mungo HOM05D005310 ORTHO05D006920 3.5e-15 85.1 76 51.3
arahy.Tifrunner.gnm1.ann1.W2RHW2 Arachis hypogaea HOM05D005310 ORTHO05D006920 4.6e-15 84.7 77 50.6
Glyma.08G118400 Glycine max HOM05D005310 ORTHO05D006920 7.9e-15 84.0 76 52.6
Potri.004G061200 Populus trichocarpa HOM05D005310 ORTHO05D006920 1.0e-14 83.6 77 51.9
Zm00001eb204900 Zea mays HOM05D005310 ORTHO05D006920 1.3e-14 83.2 77 54.5
FAN25G3188 Fragaria x ananassa HOM05D005310 ORTHO05D006920 1.8e-14 82.8 82 52.4
Phvul.002G241100 Phaseolus vulgaris HOM05D005310 ORTHO05D006920 1.8e-14 82.8 76 50.0
ECA248G0338 Erigeron canadensis HOM05D005310 ORTHO05D006920 2.3e-14 82.4 77 53.2
Glyma.05G161000 Glycine max HOM05D005310 ORTHO05D006920 2.3e-14 82.4 76 51.3
Sabra04G0040500 Salix brachista HOM05D005310 ORTHO05D006920 2.3e-14 82.4 77 53.2
CSS0016268 Camellia sinensis var. sinensis HOM05D005310 ORTHO05D006920 3.0e-14 82.0 76 52.6
PGR042G1369 Punica granatum HOM05D005310 ORTHO05D006920 3.0e-14 82.0 77 50.6
SGA_v2.0_scaffold16G07714 Striga asiatica HOM05D005310 ORTHO05D006920 3.0e-14 82.0 78 52.6
DCAR_027984 Daucus carota HOM05D005310 ORTHO05D006920 3.9e-14 81.6 77 50.6
unitig_0.g743 Utricularia gibba HOM05D005310 ORTHO05D006920 3.9e-14 81.6 76 51.3
SalBow8G4237 Salvia bowleyana HOM05D005310 ORTHO05D006920 8.7e-14 80.5 77 50.6
Thecc.06G165700 Theobroma cacao HOM05D005310 ORTHO05D006920 8.7e-14 80.5 78 53.8
Ah.14g086990 Amaranthus hybridus HOM05D005310 ORTHO05D006920 1.1e-13 80.1 77 48.1
EL10Ac8g20559 Beta vulgaris HOM05D005310 ORTHO05D006920 1.1e-13 80.1 77 49.4
AUR62041821 Chenopodium quinoa HOM05D005310 ORTHO05D006920 2.5e-13 79.0 77 46.8
HanXRQChr11g0343901 Helianthus annuus HOM05D005310 ORTHO05D006920 7.4e-13 77.4 77 49.4
HPP92_004025 Vanilla planifolia HOM05D005310 ORTHO05D006920 7.4e-13 77.4 76 50.0
Os02g0234500 Oryza sativa ssp. japonica HOM05D005310 ORTHO05D006920 9.6e-13 77.0 77 50.6
HPP92_004012 Vanilla planifolia HOM05D005310 ORTHO05D006920 3.7e-12 75.1 76 48.7
Lalb_Chr12g0204951 Lupinus albus HOM05D005310 ORTHO05D006920 8.2e-12 73.9 77 45.5
Hund04397 Selenicereus undatus HOM05D005310 ORTHO05D006920 8.2e-12 73.9 77 48.1
CDE04G2110 Ceratophyllum demersum HOM05D005310 ORTHO05D006920 1.8e-11 72.8 76 48.7
SEGI_40960 Sequoiadendron giganteum HOM05D005310 ORTHO05D006920 2.4e-11 72.4 77 49.4
AUR62039478 Chenopodium quinoa HOM05D005310 ORTHO05D006920 3.1e-11 72.0 72 45.8
ClCG03G007450 Citrullus lanatus HOM05D005310 ORTHO05D006920 3.1e-11 72.0 69 50.7
Lsat_1_v5_gn_1_110100 Lactuca sativa HOM05D005310 ORTHO05D006920 3.1e-11 72.0 70 52.9
HanXRQChr13g0424421 Helianthus annuus HOM05D005310 ORTHO05D006920 4.5e-10 68.2 71 47.9
AagrBONN_evm.TU.Sc2ySwM_362.2005 Anthoceros agrestis HOM05D005310 ORTHO05D006920 3.0e-06 55.5 77 39.0
Mapoly0037s0097 Marchantia polymorpha HOM05D005310 ORTHO05D006920 3.9e-06 55.1 76 38.2
SMO119G0157 Selaginella moellendorffii HOM05D005310 ORTHO05D006920 3.9e-06 55.1 77 44.2


User provided reference genes

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