Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO170G6362 Papaver somniferum HOM05D003589 ORTHO05D005170 1.7e-180 636.0 334 100.0
Dinv25345 Davidia involucrata HOM05D003589 ORTHO05D005170 1.9e-54 217.2 345 42.0
Aqoxy4G02429 Aquilegia oxysepala HOM05D003589 ORTHO05D005170 1.2e-50 204.5 363 38.8
TAR633G1241 Trochodendron aralioides HOM05D003589 ORTHO05D005170 8.1e-50 201.8 353 41.1
Dinv16976 Davidia involucrata HOM05D003589 ORTHO05D005170 4.2e-46 189.5 356 38.2
Nn5g26845 Nelumbo nucifera HOM05D003589 ORTHO05D005170 1.7e-44 184.1 324 42.0
Manes.09G118000 Manihot esculenta HOM05D003589 ORTHO05D005170 5.1e-44 182.6 348 39.9
Dinv34487 Davidia involucrata HOM05D003589 ORTHO05D005170 1.9e-43 180.6 328 39.6
Ciclev10011425m.g Citrus clementina HOM05D003589 ORTHO05D005170 5.6e-43 179.1 232 47.0
Actinidia20793 Actinidia chinensis HOM05D003589 ORTHO05D005170 7.3e-43 178.7 232 46.1
TAR369G0333 Trochodendron aralioides HOM05D003589 ORTHO05D005170 2.8e-42 176.8 344 40.7
MBI15_g01602_MAGBIO Magnolia biondii HOM05D003589 ORTHO05D005170 1.4e-41 174.5 318 39.3
QL07p032102 Quercus lobata HOM05D003589 ORTHO05D005170 6.4e-39 165.6 351 37.0
GSVIVG01030180001 Vitis vinifera HOM05D003589 ORTHO05D005170 8.4e-39 165.2 326 38.3
vmacro08941 Vaccinium macrocarpon HOM05D003589 ORTHO05D005170 1.9e-38 164.1 278 39.6
DCAR_028921 Daucus carota HOM05D003589 ORTHO05D005170 1.2e-37 161.4 267 41.9
Gohir.D10G115400 Gossypium hirsutum HOM05D003589 ORTHO05D005170 2.7e-37 160.2 293 38.9
TWI77G0120 Tripterygium wilfordii HOM05D003589 ORTHO05D005170 3.5e-37 159.8 345 38.0
Gorai.011G127100 Gossypium raimondii HOM05D003589 ORTHO05D005170 6.0e-37 159.1 293 38.6
Thecc.04G151400 Theobroma cacao HOM05D003589 ORTHO05D005170 1.3e-36 157.9 235 42.6
TWI74G0182 Tripterygium wilfordii HOM05D003589 ORTHO05D005170 1.8e-36 157.5 353 34.6
Gohir.A10G150900 Gossypium hirsutum HOM05D003589 ORTHO05D005170 2.3e-36 157.1 301 38.5
THA.LOC104806162 Tarenaya hassleriana HOM05D003589 ORTHO05D005170 2.3e-36 157.1 307 38.1
Hma1.2p1_0264F.1_g106130 Hydrangea macrophylla HOM05D003589 ORTHO05D005170 3.0e-36 156.8 321 38.6
Gohir.A02G003200 Gossypium hirsutum HOM05D003589 ORTHO05D005170 5.1e-36 156.0 249 40.6
Peaxi162Scf00732g00259 Petunia axillaris HOM05D003589 ORTHO05D005170 5.1e-36 156.0 216 43.5
Nitab4.5_0000048g0030 Nicotiana tabacum HOM05D003589 ORTHO05D005170 6.7e-36 155.6 220 43.6
Sc20g0006980 Simmondsia chinensis HOM05D003589 ORTHO05D005170 8.7e-36 155.2 218 45.0
Gohir.D02G003600 Gossypium hirsutum HOM05D003589 ORTHO05D005170 2.5e-35 153.7 249 40.6
Gorai.005G004100 Gossypium raimondii HOM05D003589 ORTHO05D005170 2.5e-35 153.7 249 40.6
EL10Ac7g17103 Beta vulgaris HOM05D003589 ORTHO05D005170 4.3e-35 152.9 233 43.3
PGR031G3776 Punica granatum HOM05D003589 ORTHO05D005170 4.3e-35 152.9 236 42.8
Atru.chr8.113 Acer truncatum HOM05D003589 ORTHO05D005170 5.6e-35 152.5 271 38.4
Cfa017032 Carpinus fangiana HOM05D003589 ORTHO05D005170 1.3e-34 151.4 313 38.3
Ah.15g090010 Amaranthus hybridus HOM05D003589 ORTHO05D005170 2.1e-34 150.6 229 40.6
Duzib151G0965 Durio zibethinus HOM05D003589 ORTHO05D005170 2.8e-34 150.2 229 43.2
SalBow5G3966 Salvia bowleyana HOM05D003589 ORTHO05D005170 2.4e-33 147.1 281 37.0
Nitab4.5_0004433g0040 Nicotiana tabacum HOM05D003589 ORTHO05D005170 4.0e-33 146.4 255 39.6
RcHm_v2.0_Chr3g0460451 Rosa chinensis HOM05D003589 ORTHO05D005170 6.9e-33 145.6 229 44.1
Eucgr.A00727 Eucalyptus grandis HOM05D003589 ORTHO05D005170 1.2e-32 144.8 228 42.1
FAN14G2282 Fragaria x ananassa HOM05D003589 ORTHO05D005170 3.4e-32 143.3 230 43.0
Ciclev10032400m.g Citrus clementina HOM05D003589 ORTHO05D005170 5.8e-32 142.5 234 38.9
Rhsim04G0121600 Rhododendron simsii HOM05D003589 ORTHO05D005170 5.8e-32 142.5 196 45.4
CANSAT56G1879 Cannabis sativa HOM05D003589 ORTHO05D005170 7.6e-32 142.1 346 33.8
Migut.J00036 Erythranthe guttata HOM05D003589 ORTHO05D005170 2.2e-31 140.6 277 35.4
Manes.10G001600 Manihot esculenta HOM05D003589 ORTHO05D005170 2.2e-31 140.6 289 35.3
PGSC0003DMG400026790 Solanum tuberosum HOM05D003589 ORTHO05D005170 3.8e-31 139.8 262 39.3
ClCG10G022760 Citrullus lanatus HOM05D003589 ORTHO05D005170 4.9e-31 139.4 237 42.6
Sopen09g009460 Solanum pennellii HOM05D003589 ORTHO05D005170 4.9e-31 139.4 262 38.5
CSS0030619 Camellia sinensis var. sinensis HOM05D003589 ORTHO05D005170 8.4e-31 138.7 206 44.2
Carub.0005s1794 Capsella rubella HOM05D003589 ORTHO05D005170 1.1e-30 138.3 302 37.1
Psat3g118720 Pisum sativum HOM05D003589 ORTHO05D005170 1.4e-30 137.9 220 39.5
Prupe.6G293800 Prunus persica HOM05D003589 ORTHO05D005170 1.9e-30 137.5 221 43.0
Duzib114G0452 Durio zibethinus HOM05D003589 ORTHO05D005170 2.4e-30 137.1 229 38.9
Hund03699 Selenicereus undatus HOM05D003589 ORTHO05D005170 2.4e-30 137.1 343 33.8
GSVIVG01032671001 Vitis vinifera HOM05D003589 ORTHO05D005170 4.2e-30 136.3 288 39.9
FvH4_6g09850 Fragaria vesca HOM05D003589 ORTHO05D005170 5.5e-30 136.0 230 41.3
Aa31LG1G13800 Aethionema arabicum HOM05D003589 ORTHO05D005170 7.1e-30 135.6 316 34.2
FAN05G0190 Fragaria x ananassa HOM05D003589 ORTHO05D005170 7.1e-30 135.6 275 37.8
FAN05G1200 Fragaria x ananassa HOM05D003589 ORTHO05D005170 7.1e-30 135.6 275 37.8
FAN05G4521 Fragaria x ananassa HOM05D003589 ORTHO05D005170 7.1e-30 135.6 275 37.8
FAN02G1320 Fragaria x ananassa HOM05D003589 ORTHO05D005170 2.1e-29 134.0 200 45.5
Potri.006G108400 Populus trichocarpa HOM05D003589 ORTHO05D005170 2.1e-29 134.0 271 38.7
FAN09G1607 Fragaria x ananassa HOM05D003589 ORTHO05D005170 3.5e-29 133.3 230 41.7
Solyc09g015530.3 Solanum lycopersicum HOM05D003589 ORTHO05D005170 3.5e-29 133.3 267 37.5
arahy.Tifrunner.gnm1.ann1.US8I5D Arachis hypogaea HOM05D003589 ORTHO05D005170 4.6e-29 132.9 223 36.8
AUR62029766 Chenopodium quinoa HOM05D003589 ORTHO05D005170 4.6e-29 132.9 326 34.0
Lalb_Chr01g0023761 Lupinus albus HOM05D003589 ORTHO05D005170 4.6e-29 132.9 218 41.7
Sed0000653 Sechium edule HOM05D003589 ORTHO05D005170 4.6e-29 132.9 296 33.1
AUR62006418 Chenopodium quinoa HOM05D003589 ORTHO05D005170 6.0e-29 132.5 321 35.2
Nitab4.5_0002279g0060 Nicotiana tabacum HOM05D003589 ORTHO05D005170 7.9e-29 132.1 237 40.1
MSTRG.5498 Avicennia marina HOM05D003589 ORTHO05D005170 2.3e-28 130.6 338 31.4
MELO3C020009.2 Cucumis melo HOM05D003589 ORTHO05D005170 2.3e-28 130.6 293 34.8
Glyma.18G213700 Glycine max HOM05D003589 ORTHO05D005170 2.3e-28 130.6 350 33.4
Lj1g0021012 Lotus japonicus HOM05D003589 ORTHO05D005170 2.3e-28 130.6 239 36.8
MD04G1174800 Malus domestica HOM05D003589 ORTHO05D005170 3.9e-28 129.8 215 42.8
Potri.019G058400 Populus trichocarpa HOM05D003589 ORTHO05D005170 3.9e-28 129.8 232 41.8
Haze_21177 Corylus avellana HOM05D003589 ORTHO05D005170 5.1e-28 129.4 201 42.3
PGR142G3587 Punica granatum HOM05D003589 ORTHO05D005170 5.1e-28 129.4 224 41.5
VMungo1383G2329 Vigna mungo HOM05D003589 ORTHO05D005170 5.1e-28 129.4 337 32.9
Potri.016G136900 Populus trichocarpa HOM05D003589 ORTHO05D005170 6.7e-28 129.0 279 36.9
Cpa.g.sc86.55 Carica papaya HOM05D003589 ORTHO05D005170 8.7e-28 128.6 195 43.6
Sed0028030 Sechium edule HOM05D003589 ORTHO05D005170 1.5e-27 127.9 146 51.4
CSS0028706 Camellia sinensis var. sinensis HOM05D003589 ORTHO05D005170 1.9e-27 127.5 176 45.5
CsaV3_6G002320 Cucumis sativus L. HOM05D003589 ORTHO05D005170 3.3e-27 126.7 229 36.2
AL5G32020 Arabidopsis lyrata HOM05D003589 ORTHO05D005170 4.3e-27 126.3 311 35.0
ATR1127G101 Amborella trichopoda HOM05D003589 ORTHO05D005170 7.4e-27 125.6 235 33.6
Cc02_g05350 Coffea canephora HOM05D003589 ORTHO05D005170 7.4e-27 125.6 230 40.4
HPP92_015592 Vanilla planifolia HOM05D003589 ORTHO05D005170 7.4e-27 125.6 285 34.0
Actinidia31628 Actinidia chinensis HOM05D003589 ORTHO05D005170 1.3e-26 124.8 232 40.1
arahy.Tifrunner.gnm1.ann1.IRJT2S Arachis hypogaea HOM05D003589 ORTHO05D005170 1.3e-26 124.8 201 37.8
ClCG11G005660 Citrullus lanatus HOM05D003589 ORTHO05D005170 1.3e-26 124.8 243 35.4
A03p48340 Brassica napus HOM05D003589 ORTHO05D005170 2.1e-26 124.0 292 35.3
Sp5g10690 Schrenkiella parvula HOM05D003589 ORTHO05D005170 2.1e-26 124.0 234 38.0
Peaxi162Scf00167g01218 Petunia axillaris HOM05D003589 ORTHO05D005170 2.8e-26 123.6 237 37.6
Thhalv10010441m.g Eutrema salsugineum HOM05D003589 ORTHO05D005170 3.7e-26 123.2 225 39.6
AT3G51580 Arabidopsis thaliana HOM05D003589 ORTHO05D005170 1.1e-25 121.7 288 33.7
CiPaw.09G221500 Carya illinoinensis HOM05D003589 ORTHO05D005170 1.1e-25 121.7 200 42.0
Glyma.09G274700 Glycine max HOM05D003589 ORTHO05D005170 1.8e-25 120.9 210 39.0
Lj8A54T74 Lonicera japonica HOM05D003589 ORTHO05D005170 1.8e-25 120.9 238 36.6
Phvul.008G082600 Phaseolus vulgaris HOM05D003589 ORTHO05D005170 1.8e-25 120.9 343 30.6
CARHR161170 Cardamine hirsuta HOM05D003589 ORTHO05D005170 2.4e-25 120.6 310 31.9
TPR.G14123 Trifolium pratense HOM05D003589 ORTHO05D005170 3.1e-25 120.2 202 39.6
BraA03t13942Z Brassica rapa HOM05D003589 ORTHO05D005170 9.0e-25 118.6 255 36.9
MD12G1188500 Malus domestica HOM05D003589 ORTHO05D005170 9.0e-25 118.6 225 38.2
SGA_v2.0_scaffold85G26610 Striga asiatica HOM05D003589 ORTHO05D005170 1.2e-24 118.2 357 28.9
Migut.F01242 Erythranthe guttata HOM05D003589 ORTHO05D005170 1.5e-24 117.9 235 34.0
BcaC06g33027 Brassica carinata HOM05D003589 ORTHO05D005170 2.6e-24 117.1 301 34.9
C07p46370 Brassica napus HOM05D003589 ORTHO05D005170 4.5e-24 116.3 298 33.9
Eucgr.G03139 Eucalyptus grandis HOM05D003589 ORTHO05D005170 1.7e-23 114.4 301 36.5
Medtr7g073280 Medicago truncatula HOM05D003589 ORTHO05D005170 1.7e-23 114.4 361 28.5
Rhsim03G0152700 Rhododendron simsii HOM05D003589 ORTHO05D005170 2.2e-23 114.0 196 39.3
Ca_02266_v3 Cicer arietinum L. HOM05D003589 ORTHO05D005170 2.9e-23 113.6 161 44.1
Nitab4.5_0000375g0230 Nicotiana tabacum HOM05D003589 ORTHO05D005170 2.9e-23 113.6 236 38.6
Manes.08G171100 Manihot esculenta HOM05D003589 ORTHO05D005170 3.8e-23 113.2 341 32.0
BolC7t45155H Brassica oleracea HOM05D003589 ORTHO05D005170 4.9e-23 112.8 309 33.7
MSTRG.169 Avicennia marina HOM05D003589 ORTHO05D005170 6.5e-23 112.5 273 33.7
vmacro06893 Vaccinium macrocarpon HOM05D003589 ORTHO05D005170 1.4e-22 111.3 325 32.9
Sopen05g030750 Solanum pennellii HOM05D003589 ORTHO05D005170 1.9e-22 110.9 210 39.0
Solyc05g052210.3 Solanum lycopersicum HOM05D003589 ORTHO05D005170 3.2e-22 110.2 182 39.0
PGSC0003DMG400011643 Solanum tuberosum HOM05D003589 ORTHO05D005170 4.2e-22 109.8 210 38.6
Rhsim03G0152300 Rhododendron simsii HOM05D003589 ORTHO05D005170 5.5e-22 109.4 196 39.3
Sabra06G0084600 Salix brachista HOM05D003589 ORTHO05D005170 5.5e-22 109.4 331 31.4
Sabra04G0153600 Salix brachista HOM05D003589 ORTHO05D005170 1.6e-21 107.8 195 43.6
SEGI_11810 Sequoiadendron giganteum HOM05D003589 ORTHO05D005170 3.5e-21 106.7 201 37.8
DCAR_018039 Daucus carota HOM05D003589 ORTHO05D005170 4.6e-21 106.3 248 35.9
COL.COLO4_06483 Corchorus olitorius HOM05D003589 ORTHO05D005170 7.9e-21 105.5 211 37.0
ECA247G3378 Erigeron canadensis HOM05D000259 ORTHO05D000155 1.3e-20 104.8 138 49.3
Oeu006056.1 Olea europaea HOM05D003589 ORTHO05D005170 1.3e-20 104.8 183 41.5
HanXRQChr10g0287531 Helianthus annuus HOM05D003589 ORTHO05D005170 2.3e-20 104.0 436 27.8
Sabra19G0073800 Salix brachista HOM05D003589 ORTHO05D005170 1.1e-19 101.7 227 37.0
Thecc.10G179400 Theobroma cacao HOM05D003589 ORTHO05D005170 1.5e-19 101.3 204 35.8
DCAR_014664 Daucus carota HOM05D003589 ORTHO05D005170 3.3e-19 100.1 184 37.0
Potri.003G139400 Populus trichocarpa HOM05D007666 ORTHO05D009567 4.3e-19 99.8 224 30.4
Os05g0478200 Oryza sativa ssp. japonica HOM05D003589 ORTHO05D005170 1.3e-18 98.2 223 33.6
Cpa.g.sc19.55 Carica papaya HOM05D003589 ORTHO05D005170 1.6e-18 97.8 241 32.8
Oeu057998.1 Olea europaea HOM05D003589 ORTHO05D005170 2.8e-18 97.1 137 44.5
unitig_578.g15914 Utricularia gibba HOM05D003589 ORTHO05D005170 4.8e-18 96.3 281 28.1
Migut.A00661 Erythranthe guttata HOM05D007666 ORTHO05D009567 1.8e-17 94.4 253 32.4
Nn2g10296 Nelumbo nucifera HOM05D003589 ORTHO05D005170 4.1e-17 93.2 176 39.8
GSVIVG01019521001 Vitis vinifera HOM05D007666 ORTHO05D009567 6.9e-17 92.4 225 33.3
SalBow5G5138 Salvia bowleyana HOM05D003589 ORTHO05D005170 4.5e-16 89.7 218 34.9
MBI07_g38452_MAGBIO Magnolia biondii HOM05D007666 ORTHO05D009567 5.9e-16 89.4 227 30.0
COL.COLO4_19418 Corchorus olitorius HOM05D003589 ORTHO05D005170 7.6e-16 89.0 208 32.2
ATR0188G013 Amborella trichopoda HOM05D007666 ORTHO05D009567 1.3e-15 88.2 294 29.6
CDE04G2629 Ceratophyllum demersum HOM05D003589 ORTHO05D005170 2.2e-15 87.4 272 30.9
Ah.07g197340 Amaranthus hybridus HOM05D007666 ORTHO05D009567 5.0e-15 86.3 226 35.0
Gohir.A05G402800 Gossypium hirsutum HOM05D003589 ORTHO05D005170 8.5e-15 85.5 222 33.8
Lsat_1_v5_gn_9_38921 Lactuca sativa HOM05D003589 ORTHO05D005170 8.5e-15 85.5 372 26.6
ECA238G2532 Erigeron canadensis HOM05D003589 ORTHO05D005170 1.1e-14 85.1 238 31.9
MSTRG.25667 Avicennia marina HOM05D007666 ORTHO05D009567 1.9e-14 84.3 228 29.8
Aqoxy5G04207 Aquilegia oxysepala HOM05D007666 ORTHO05D009567 4.2e-14 83.2 230 32.2
Gohir.D04G012700 Gossypium hirsutum HOM05D003589 ORTHO05D005170 5.5e-14 82.8 221 29.9
Oeu044185.1 Olea europaea HOM05D003589 ORTHO05D005170 5.5e-14 82.8 119 47.9
CiPaw.11G122000 Carya illinoinensis HOM05D007666 ORTHO05D009567 7.2e-14 82.4 247 31.2
Gorai.012G015000 Gossypium raimondii HOM05D003589 ORTHO05D005170 7.2e-14 82.4 221 29.4
Peaxi162Scf00074g00106 Petunia axillaris HOM05D007666 ORTHO05D009567 1.6e-13 81.3 224 30.8
Cpa.g.sc79.41 Carica papaya HOM05D007666 ORTHO05D009567 2.7e-13 80.5 224 30.4
Cc08_g15990 Coffea canephora HOM05D007666 ORTHO05D009567 6.1e-13 79.3 227 31.3
CDE04G3060 Ceratophyllum demersum HOM05D003589 ORTHO05D005170 1.0e-12 78.6 232 30.2
SGA_v2.0_scaffold305G47963 Striga asiatica HOM05D007666 ORTHO05D009567 1.3e-12 78.2 227 30.0
HanXRQChr06g0166511 Helianthus annuus HOM05D007666 ORTHO05D009567 3.9e-12 76.6 269 31.2
MELO3C016286.2 Cucumis melo HOM05D007666 ORTHO05D009567 5.1e-12 76.3 230 33.5
PGSC0003DMG400012289 Solanum tuberosum HOM05D007666 ORTHO05D009567 1.1e-11 75.1 224 30.8
Sopen08g030510 Solanum pennellii HOM05D007666 ORTHO05D009567 3.3e-11 73.6 224 30.8
CsaV3_4G006520 Cucumis sativus L. HOM05D007666 ORTHO05D009567 5.7e-11 72.8 227 30.4
Oeu060212.1 Olea europaea HOM05D003589 ORTHO05D005170 5.7e-11 72.8 82 52.4
Hma1.2p1_0229F.1_g097150 Hydrangea macrophylla HOM05D007666 ORTHO05D009567 9.7e-11 72.0 218 28.4
ECA246G0366 Erigeron canadensis HOM05D007666 ORTHO05D009567 4.8e-10 69.7 221 29.4
ClCG07G014990 Citrullus lanatus HOM05D007666 ORTHO05D009567 6.3e-10 69.3 258 29.8
HanXRQChr07g0204121 Helianthus annuus HOM05D003589 ORTHO05D005170 6.3e-10 69.3 243 29.6
SalBow1G7426 Salvia bowleyana HOM05D007666 ORTHO05D009567 5.3e-09 66.2 304 24.7
Lj2C168T16 Lonicera japonica HOM05D007666 ORTHO05D009567 1.0e-07 62.0 200 27.5
Sed0008321 Sechium edule HOM05D007666 ORTHO05D009567 1.0e-07 62.0 247 29.1
Dinv37538 Davidia involucrata HOM05D007666 ORTHO05D009567 8.5e-07 58.9 100 37.0
THA.LOC104817649 Tarenaya hassleriana HOM05D007666 ORTHO05D009567 1.1e-06 58.5 169 31.4


User provided reference genes

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