Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO170G6342 Papaver somniferum HOM05D006171 ORTHO05D007294 1.7e-117 426.0 209 100.0
PSO017G5952 Papaver somniferum HOM05D006171 ORTHO05D007294 9.1e-116 420.2 209 98.1
CANSAT64G1829 Cannabis sativa HOM05D006171 ORTHO05D007294 1.5e-97 359.8 209 82.8
Nitab4.5_0004738g0050 Nicotiana tabacum HOM05D006171 ORTHO05D007294 4.4e-94 348.2 192 84.9
Solyc03g117740.3 Solanum lycopersicum HOM05D006171 ORTHO05D007294 5.7e-94 347.8 192 84.9
Sopen03g036650 Solanum pennellii HOM05D006171 ORTHO05D007294 1.3e-93 346.7 192 84.9
CAN.G1008.12 Capsicum annuum HOM05D006171 ORTHO05D007294 2.2e-93 345.9 191 84.3
Peaxi162Scf00314g01040 Petunia axillaris HOM05D006171 ORTHO05D007294 2.2e-93 345.9 192 84.4
Manes.11G069800 Manihot esculenta HOM05D006171 ORTHO05D007294 4.8e-93 344.7 192 84.4
Nitab4.5_0002700g0080 Nicotiana tabacum HOM05D006171 ORTHO05D007294 4.8e-93 344.7 192 83.9
Gohir.D05G117900 Gossypium hirsutum HOM05D006171 ORTHO05D007294 6.3e-93 344.4 192 82.3
PGR102G1595 Punica granatum HOM05D006171 ORTHO05D007294 6.3e-93 344.4 192 83.3
Sabra03G0135700 Salix brachista HOM05D006171 ORTHO05D007294 6.3e-93 344.4 192 84.4
SalBow1G2136 Salvia bowleyana HOM05D006171 ORTHO05D007294 8.3e-93 344.0 192 84.4
TWI12G1342 Tripterygium wilfordii HOM05D006171 ORTHO05D007294 1.1e-92 343.6 192 83.9
Oeu003115.1 Olea europaea HOM05D006171 ORTHO05D007294 1.4e-92 343.2 192 82.8
Oeu003116.1 Olea europaea HOM05D006171 ORTHO05D007294 1.4e-92 343.2 192 82.8
Potri.003G185754 Populus trichocarpa HOM05D006171 ORTHO05D007294 1.4e-92 343.2 192 83.9
PGSC0003DMG400014158 Solanum tuberosum HOM05D006171 ORTHO05D007294 1.4e-92 343.2 192 83.3
GSVIVG01016093001 Vitis vinifera HOM05D006171 ORTHO05D007294 1.4e-92 343.2 192 84.4
COL.COLO4_26789 Corchorus olitorius HOM05D006171 ORTHO05D007294 2.4e-92 342.4 192 83.9
Potri.003G185501 Populus trichocarpa HOM05D006171 ORTHO05D007294 3.1e-92 342.0 192 83.3
Cfa001846 Carpinus fangiana HOM05D006171 ORTHO05D007294 5.3e-92 341.3 192 82.3
Eucgr.F03988 Eucalyptus grandis HOM05D006171 ORTHO05D007294 7.0e-92 340.9 192 83.3
CiPaw.01G256900 Carya illinoinensis HOM05D006171 ORTHO05D007294 9.1e-92 340.5 192 83.3
Potri.001G040100 Populus trichocarpa HOM05D006171 ORTHO05D007294 9.1e-92 340.5 192 83.9
Potri.003G185901 Populus trichocarpa HOM05D006171 ORTHO05D007294 1.2e-91 340.1 192 83.3
TAR626G1848 Trochodendron aralioides HOM05D006171 ORTHO05D007294 1.6e-91 339.7 192 82.3
Aqoxy7G02339 Aquilegia oxysepala HOM05D006171 ORTHO05D007294 2.0e-91 339.3 192 80.7
Duzib235G0222 Durio zibethinus HOM05D006171 ORTHO05D007294 2.0e-91 339.3 192 82.3
Sc10g0006500 Simmondsia chinensis HOM05D006171 ORTHO05D007294 2.0e-91 339.3 192 82.8
Thecc.06G048100 Theobroma cacao HOM05D006171 ORTHO05D007294 2.0e-91 339.3 192 82.3
Carub.0001s1588 Capsella rubella HOM05D006171 ORTHO05D007294 3.5e-91 338.6 192 81.2
Prupe.3G104600 Prunus persica HOM05D006171 ORTHO05D007294 3.5e-91 338.6 192 82.8
Hund22405 Selenicereus undatus HOM05D006171 ORTHO05D007294 5.9e-91 337.8 192 81.8
Ah.09g231760 Amaranthus hybridus HOM05D006171 ORTHO05D007294 7.7e-91 337.4 192 82.8
SGA_v2.0_scaffold74G24604 Striga asiatica HOM05D006171 ORTHO05D007294 7.7e-91 337.4 192 82.8
AT1G16080 Arabidopsis thaliana HOM05D006171 ORTHO05D007294 1.3e-90 336.7 192 80.7
EL10Ac8g19420 Beta vulgaris HOM05D006171 ORTHO05D007294 1.3e-90 336.7 191 81.7
Cpa.g.sc95.67 Carica papaya HOM05D006171 ORTHO05D007294 1.3e-90 336.7 192 82.8
Nn2g12468 Nelumbo nucifera HOM05D006171 ORTHO05D007294 1.3e-90 336.7 192 82.8
AL1G28240 Arabidopsis lyrata HOM05D006171 ORTHO05D007294 1.7e-90 336.3 192 81.2
A09p61030 Brassica napus HOM05D000031 ORTHO05D007294 2.9e-90 335.5 191 80.1
BraA09t41476Z Brassica rapa HOM05D000031 ORTHO05D007294 2.9e-90 335.5 191 80.1
THA.LOC104812426 Tarenaya hassleriana HOM05D006171 ORTHO05D007294 2.9e-90 335.5 192 81.8
Ciclev10025944m.g Citrus clementina HOM05D006171 ORTHO05D007294 3.8e-90 335.1 192 82.3
Thhalv10008259m.g Eutrema salsugineum HOM05D006171 ORTHO05D007294 3.8e-90 335.1 192 80.7
Rhsim12G0183500 Rhododendron simsii HOM05D006171 ORTHO05D007294 5.0e-90 334.7 192 81.2
Sp1g14390 Schrenkiella parvula HOM05D006171 ORTHO05D007294 5.0e-90 334.7 192 80.2
Cc04_g05360 Coffea canephora HOM05D006171 ORTHO05D007294 8.5e-90 334.0 192 81.8
FvH4_6g28180 Fragaria vesca HOM05D006171 ORTHO05D007294 8.5e-90 334.0 192 81.2
FAN14G3270 Fragaria x ananassa HOM05D006171 ORTHO05D007294 8.5e-90 334.0 192 81.2
BcaB02g06590 Brassica carinata HOM05D006171 ORTHO05D007294 1.5e-89 333.2 192 80.7
BolC5t30159H Brassica oleracea HOM05D006171 ORTHO05D007294 1.5e-89 333.2 192 80.2
CSS0034221 Camellia sinensis var. sinensis HOM05D006171 ORTHO05D007294 1.5e-89 333.2 192 81.2
Migut.D01148 Erythranthe guttata HOM05D006171 ORTHO05D007294 1.5e-89 333.2 192 80.7
Lj5C82T4 Lonicera japonica HOM05D006171 ORTHO05D007294 1.5e-89 333.2 191 81.7
RcHm_v2.0_Chr2g0132161 Rosa chinensis HOM05D006171 ORTHO05D007294 1.5e-89 333.2 192 80.7
A06p12100 Brassica napus HOM05D006171 ORTHO05D007294 2.5e-89 332.4 192 80.7
BraA06t24379Z Brassica rapa HOM05D006171 ORTHO05D007294 2.5e-89 332.4 192 80.7
Lsat_1_v5_gn_4_84921 Lactuca sativa HOM05D006171 ORTHO05D007294 2.5e-89 332.4 191 81.7
BcaC05g25605 Brassica carinata HOM05D006171 ORTHO05D007294 4.2e-89 331.6 192 80.2
CDE07G0158 Ceratophyllum demersum HOM05D006171 ORTHO05D007294 4.2e-89 331.6 192 80.2
FAN09G0753 Fragaria x ananassa HOM05D006171 ORTHO05D007294 4.2e-89 331.6 192 80.7
Atru.chr1.2816 Acer truncatum HOM05D006171 ORTHO05D007294 5.5e-89 331.3 192 80.2
Aa31LG7G650 Aethionema arabicum HOM05D006171 ORTHO05D007294 5.5e-89 331.3 192 79.7
AUR62002650 Chenopodium quinoa HOM05D006171 ORTHO05D007294 5.5e-89 331.3 191 80.1
AUR62034059 Chenopodium quinoa HOM05D006171 ORTHO05D007294 7.2e-89 330.9 191 80.1
Actinidia36860 Actinidia chinensis HOM05D006171 ORTHO05D007294 9.4e-89 330.5 192 79.7
ECA232G3902 Erigeron canadensis HOM05D006171 ORTHO05D007294 1.2e-88 330.1 191 81.2
MD09G1228700 Malus domestica HOM05D006171 ORTHO05D007294 1.2e-88 330.1 192 80.7
unitig_62.g23820 Utricularia gibba HOM05D006171 ORTHO05D007294 1.2e-88 330.1 192 79.7
C08p44630 Brassica napus HOM05D000031 ORTHO05D007294 1.6e-88 329.7 191 78.5
BolC8t52009H Brassica oleracea HOM05D000031 ORTHO05D007294 1.6e-88 329.7 191 78.5
Potri.001G041140 Populus trichocarpa HOM05D006171 ORTHO05D007294 2.7e-88 328.9 192 82.8
MSTRG.9390 Avicennia marina HOM05D006171 ORTHO05D007294 1.0e-87 327.0 192 80.2
vmacro16838 Vaccinium macrocarpon HOM05D006171 ORTHO05D007294 1.0e-87 327.0 192 79.7
C05p14280 Brassica napus HOM05D006171 ORTHO05D007294 1.4e-87 326.6 192 79.7
CsaV3_7G031750 Cucumis sativus L. HOM05D006171 ORTHO05D007294 1.4e-87 326.6 192 79.7
HPP92_021945 Vanilla planifolia HOM05D006171 ORTHO05D007294 1.8e-87 326.2 192 79.7
MELO3C023482.2 Cucumis melo HOM05D006171 ORTHO05D007294 3.0e-87 325.5 192 79.7
BcaB03g14506 Brassica carinata HOM05D000031 ORTHO05D007294 4.0e-87 325.1 192 78.1
MD17G1227100 Malus domestica HOM05D006171 ORTHO05D007294 8.8e-87 323.9 190 80.0
Medtr4g007910 Medicago truncatula HOM05D006171 ORTHO05D007294 1.2e-86 323.6 192 79.2
ClCG09G003450 Citrullus lanatus HOM05D006171 ORTHO05D007294 1.5e-86 323.2 192 78.6
Psat7g260440 Pisum sativum HOM05D006171 ORTHO05D007294 5.7e-86 321.2 192 78.6
VMungo0647G1588 Vigna mungo HOM05D006171 ORTHO05D007294 5.7e-86 321.2 192 77.6
Glyma.07G020900 Glycine max HOM05D006171 ORTHO05D007294 9.8e-86 320.5 192 77.6
Lalb_Chr25g0278721 Lupinus albus HOM05D006171 ORTHO05D007294 9.8e-86 320.5 192 79.7
MBI14_g16440_MAGBIO Magnolia biondii HOM05D006171 ORTHO05D007294 1.3e-85 320.1 192 78.6
ATR0580G215 Amborella trichopoda HOM05D006171 ORTHO05D007294 1.7e-85 319.7 190 77.9
Glyma.08G220900 Glycine max HOM05D006171 ORTHO05D007294 1.7e-85 319.7 192 76.6
arahy.Tifrunner.gnm1.ann1.B85C5A Arachis hypogaea HOM05D006171 ORTHO05D007294 2.8e-85 318.9 192 78.1
arahy.Tifrunner.gnm1.ann1.F1WQ27 Arachis hypogaea HOM05D006171 ORTHO05D007294 3.7e-85 318.5 192 78.1
Phvul.008G253700 Phaseolus vulgaris HOM05D006171 ORTHO05D007294 8.3e-85 317.4 192 76.0
Phvul.009G155700 Phaseolus vulgaris HOM05D006171 ORTHO05D007294 1.8e-84 316.2 192 75.5
HanXRQChr16g0499501 Helianthus annuus HOM05D006171 ORTHO05D007294 2.4e-84 315.8 191 78.5
VMungo1309G0227 Vigna mungo HOM05D006171 ORTHO05D007294 3.1e-84 315.5 192 74.5
Lj3g0005429 Lotus japonicus HOM05D006171 ORTHO05D007294 7.7e-83 310.8 192 75.5
Zm00001eb177930 Zea mays HOM05D006171 ORTHO05D007294 7.7e-83 310.8 192 74.5
Pp3c1_40240 Physcomitrium patens HOM05D006171 ORTHO05D007294 9.5e-81 303.9 191 73.8
CBR_g3722 Chara braunii HOM05D006171 ORTHO05D007294 2.0e-75 286.2 192 68.8
SMO356G0223 Selaginella moellendorffii HOM05D006171 ORTHO05D007294 2.0e-75 286.2 191 68.6
CSS0033272 Camellia sinensis var. sinensis HOM05D006171 ORTHO05D007294 2.7e-75 285.8 192 72.9
Mapoly0047s0137 Marchantia polymorpha HOM05D006171 ORTHO05D007294 6.1e-72 274.6 191 67.0
CBR_g39222 Chara braunii HOM05D006171 ORTHO05D007294 8.0e-72 274.2 187 67.9
Gorai.009G121800 Gossypium raimondii HOM05D006171 ORTHO05D007294 5.8e-70 268.1 154 81.8
FAN05G3051 Fragaria x ananassa HOM05D006171 ORTHO05D007294 8.6e-66 254.2 162 76.5
Os08g0266300 Oryza sativa ssp. japonica HOM05D006171 ORTHO05D007294 9.5e-65 250.8 168 73.2
MCO15G666 Micromonas commoda HOM05D006171 ORTHO05D007294 1.2e-64 250.4 193 62.2
PRCOL_00006061 Prasinoderma coloniale HOM05D006171 ORTHO05D007294 4.4e-62 241.9 191 60.7
Cre10.g435850 Chlamydomonas reinhardtii HOM05D006171 ORTHO05D007294 8.3e-61 237.7 192 61.5
HanXRQChr16g0499491 Helianthus annuus HOM05D006171 ORTHO05D007294 5.4e-60 235.0 194 58.2
AagrBONN_evm.TU.Sc2ySwM_344.694 Anthoceros agrestis HOM05D006171 ORTHO05D007294 1.7e-58 229.9 154 74.0
RcHm_v2.0_Chr2g0132191 Rosa chinensis HOM05D006171 ORTHO05D007294 1.7e-58 229.9 190 64.2
Dinv21434 Davidia involucrata HOM05D006171 ORTHO05D007294 1.2e-54 217.2 127 83.5
Rhsim12G0183600 Rhododendron simsii HOM05D006171 ORTHO05D007294 5.8e-54 214.9 249 49.4
Gohir.A05G117000 Gossypium hirsutum HOM05D006171 ORTHO05D007294 1.3e-50 203.8 110 85.5
Aqoxy6G02563 Aquilegia oxysepala HOM05D006171 ORTHO05D007294 1.9e-49 199.9 175 55.4
QL05p037111 Quercus lobata HOM05D006171 ORTHO05D007294 8.9e-47 191.0 114 79.8
Hma1.2p1_2173F.1_g316040 Hydrangea macrophylla HOM05D006171 ORTHO05D007294 7.6e-38 161.4 138 62.3
QL05p037113 Quercus lobata HOM05D006171 ORTHO05D007294 3.9e-34 149.1 82 80.5
Sed0008158 Sechium edule HOM05D006171 ORTHO05D007294 2.1e-24 116.7 67 79.1
SEGI_00638 Sequoiadendron giganteum HOM05D006171 ORTHO05D007294 1.7e-21 107.1 65 76.9
AagrBONN_evm.TU.Sc2ySwM_344.1199 Anthoceros agrestis HOM05D006171 ORTHO05D007294 2.1e-19 100.1 208 33.7
CDE04G3654 Ceratophyllum demersum HOM05D006171 ORTHO05D007294 4.3e-17 92.4 46 89.1
arahy.Tifrunner.gnm1.ann1.VYJR5C Arachis hypogaea HOM05D006171 ORTHO05D007294 4.5e-14 82.4 104 50.0
Cre03.g167050 Chlamydomonas reinhardtii HOM05D006171 ORTHO05D007294 1.9e-09 67.0 181 28.2


User provided reference genes

Program Settings