Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO170G6317 Papaver somniferum HOM05D008523 ORTHO05D010723 1.1e-240 836.3 418 100.0
TAR381G0860 Trochodendron aralioides HOM05D008523 ORTHO05D010723 1.1e-107 394.4 327 62.7
Nn1g08698 Nelumbo nucifera HOM05D008523 ORTHO05D010723 1.6e-100 370.5 354 56.5
Dinv40375 Davidia involucrata HOM05D008523 ORTHO05D010723 5.0e-97 359.0 372 56.7
GSVIVG01008905001 Vitis vinifera HOM05D008523 ORTHO05D010723 7.4e-93 345.1 309 60.5
Aqoxy6G00203 Aquilegia oxysepala HOM05D008523 ORTHO05D010723 8.2e-92 341.7 299 60.9
Atru.chr13.1404 Acer truncatum HOM05D008523 ORTHO05D010723 7.2e-88 328.6 319 58.3
CANSAT25G1340 Cannabis sativa HOM05D008523 ORTHO05D010723 9.7e-85 318.2 343 51.0
PGR042G3956 Punica granatum HOM05D008523 ORTHO05D010723 1.1e-83 314.7 321 53.6
MD08G1168300 Malus domestica HOM05D008523 ORTHO05D010723 4.1e-83 312.8 338 51.2
Migut.C01156 Erythranthe guttata HOM05D008523 ORTHO05D010723 1.4e-78 297.7 327 50.8
Rhsim07G0163700 Rhododendron simsii HOM05D008523 ORTHO05D010723 2.0e-77 293.9 299 52.8
Thecc.08G120800 Theobroma cacao HOM05D008523 ORTHO05D010723 6.1e-63 245.7 208 63.0
SMO347G0131 Selaginella moellendorffii HOM05D008523 ORTHO05D010723 7.5e-61 238.8 206 59.2
AagrBONN_evm.TU.Sc2ySwM_362.1100 Anthoceros agrestis HOM05D008523 ORTHO05D010723 9.8e-61 238.4 204 58.8
Dinv01183 Davidia involucrata HOM05D008523 ORTHO05D010723 2.2e-60 237.3 186 66.7
Solyc11g013090.2 Solanum lycopersicum HOM05D008523 ORTHO05D010723 1.6e-58 231.1 499 34.1
Pp3c11_25910 Physcomitrium patens HOM05D008523 ORTHO05D010723 5.9e-58 229.2 181 63.5
Mapoly0082s0057 Marchantia polymorpha HOM05D008523 ORTHO05D010723 2.9e-57 226.9 181 62.4
SEGI_03454 Sequoiadendron giganteum HOM05D008523 ORTHO05D010723 6.5e-57 225.7 232 52.2
HPP92_005840 Vanilla planifolia HOM05D008523 ORTHO05D010723 8.6e-57 225.3 209 55.0
Cfa015985 Carpinus fangiana HOM05D008523 ORTHO05D000423 1.5e-56 224.6 195 61.5
QL05p051451 Quercus lobata HOM05D000038 ORTHO05D000423 1.5e-56 224.6 190 62.6
HPP92_027951 Vanilla planifolia HOM05D008523 ORTHO05D010723 2.5e-56 223.8 211 55.9
HPP92_005846 Vanilla planifolia HOM05D008523 ORTHO05D010723 3.3e-56 223.4 209 54.5
Ciclev10003859m.g Citrus clementina HOM05D008523 ORTHO05D010723 2.1e-55 220.7 191 59.7
CBR_g66722 Chara braunii HOM05D008523 ORTHO05D010723 6.1e-55 219.2 175 62.3
Nitab4.5_0004554g0040 Nicotiana tabacum HOM05D000038 ORTHO05D000423 1.2e-53 214.9 213 55.4
Gorai.010G048500 Gossypium raimondii HOM05D000038 ORTHO05D000423 2.0e-53 214.2 208 55.3
QL05p051411 Quercus lobata HOM05D000038 ORTHO05D000423 2.6e-53 213.8 208 57.2
MBI03_g26564_MAGBIO Magnolia biondii HOM05D008523 ORTHO05D010723 1.1e-51 208.4 171 59.6
Nitab4.5_0010364g0010 Nicotiana tabacum HOM05D000038 ORTHO05D000423 1.1e-51 208.4 213 54.9
Haze_00486 Corylus avellana HOM05D008523 ORTHO05D010723 3.6e-47 193.4 170 60.0
Cpa.g.sc36.25 Carica papaya HOM05D008523 ORTHO05D010723 5.2e-46 189.5 171 57.9
Peaxi162Scf00451g00722 Petunia axillaris HOM05D000038 ORTHO05D000423 7.0e-43 179.1 150 61.3
Gohir.A06G042301 Gossypium hirsutum HOM05D008523 ORTHO05D010723 7.8e-42 175.6 173 53.8
PRCOL_00001244 Prasinoderma coloniale HOM05D008523 ORTHO05D010723 5.0e-41 172.9 240 42.1
MBI03_g05982_MAGBIO Magnolia biondii HOM05D008523 ORTHO05D010723 5.2e-38 162.9 224 45.1
MCO15G259 Micromonas commoda HOM05D008523 ORTHO05D010723 2.2e-36 157.5 166 48.2
PRCOL_00000745 Prasinoderma coloniale HOM05D008523 ORTHO05D010723 6.4e-36 156.0 179 48.6
SalBow7G0429 Salvia bowleyana HOM05D008523 ORTHO05D010723 3.2e-35 153.7 266 41.0
CSS0029332 Camellia sinensis var. sinensis HOM05D008523 ORTHO05D010723 1.6e-31 141.4 107 64.5
PGSC0003DMG402000914 Solanum tuberosum HOM05D008523 ORTHO05D010723 4.4e-29 133.3 118 56.8
SalBow7G3869 Salvia bowleyana HOM05D008523 ORTHO05D010723 1.9e-24 117.9 266 35.3
Haze_00484 Corylus avellana HOM05D008523 ORTHO05D010723 2.5e-24 117.5 122 50.8
PGSC0003DMG401000914 Solanum tuberosum HOM05D008523 ORTHO05D010723 2.5e-24 117.5 180 42.2
Sopen11g007810 Solanum pennellii HOM05D000038 ORTHO05D000423 1.4e-22 111.7 192 38.0
Gohir.A06G042401 Gossypium hirsutum HOM05D000038 ORTHO05D000423 4.0e-22 110.2 97 57.7
COL.COLO4_07273 Corchorus olitorius HOM05D000038 ORTHO05D000423 6.8e-22 109.4 121 51.2
Gohir.D06G043400 Gossypium hirsutum HOM05D000038 ORTHO05D000423 7.6e-21 105.9 160 42.5
HPP92_009511 Vanilla planifolia HOM05D008523 ORTHO05D010723 6.6e-17 92.8 211 33.2
Duzib041G0488 Durio zibethinus HOM05D008523 ORTHO05D010723 6.2e-15 86.3 99 48.5
Ca_31317_v3 Cicer arietinum L. HOM05D008523 ORTHO05D010723 4.4e-13 80.1 107 41.1
Ca_29195_v3 Cicer arietinum L. HOM05D008523 ORTHO05D010723 9.9e-13 79.0 222 28.4
COL.COLO4_00988 Corchorus olitorius HOM05D008523 ORTHO05D010723 1.3e-12 78.6 125 35.2
SEGI_37575 Sequoiadendron giganteum HOM05D008523 ORTHO05D010723 4.2e-11 73.6 121 35.5
Nitab4.5_0029384g0020 Nicotiana tabacum HOM05D008523 ORTHO05D010723 4.8e-07 60.1 131 32.1


User provided reference genes

Program Settings