Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO170G6310 Papaver somniferum HOM05D007001 ORTHO05D005587 0.0e+00 1378.6 683 100.0
PSO764G0276 Papaver somniferum HOM05D007001 ORTHO05D005587 0.0e+00 1320.8 682 96.3
TAR376G0762 Trochodendron aralioides HOM05D007001 ORTHO05D005587 8.7e-75 285.8 786 30.7
Aqoxy5G01586 Aquilegia oxysepala HOM05D007001 ORTHO05D005587 9.1e-56 222.6 766 27.4
Actinidia00536 Actinidia chinensis HOM05D007001 ORTHO05D005587 7.0e-48 196.4 769 26.3
Nn5g29665 Nelumbo nucifera HOM05D007001 ORTHO05D005587 1.5e-47 195.3 717 28.9
Actinidia36006 Actinidia chinensis HOM05D007001 ORTHO05D005587 1.7e-46 191.8 747 26.9
CSS0022058 Camellia sinensis var. sinensis HOM05D007001 ORTHO05D005587 1.1e-45 189.1 743 28.1
GSVIVG01023803001 Vitis vinifera HOM05D007001 ORTHO05D005587 3.7e-41 174.1 377 34.7
Haze_02407 Corylus avellana HOM05D007001 ORTHO05D005587 5.3e-40 170.2 675 28.3
Manes.04G089500 Manihot esculenta HOM05D007001 ORTHO05D005587 5.3e-40 170.2 735 26.7
Ciclev10027908m.g Citrus clementina HOM05D007001 ORTHO05D005587 2.0e-39 168.3 768 27.3
Cfa004981 Carpinus fangiana HOM05D007001 ORTHO05D005587 7.7e-39 166.4 634 29.2
TWI79G0124 Tripterygium wilfordii HOM05D007001 ORTHO05D005587 1.1e-37 162.5 742 25.9
MBI10_g06730_MAGBIO Magnolia biondii HOM05D007001 ORTHO05D005587 7.2e-37 159.8 562 29.7
Manes.11G085600 Manihot esculenta HOM05D007001 ORTHO05D005587 2.7e-36 157.9 726 25.8
QL11p044451 Quercus lobata HOM05D007001 ORTHO05D005587 3.6e-36 157.5 384 33.6
Duzib052G0704 Durio zibethinus HOM05D007001 ORTHO05D005587 8.0e-36 156.4 758 24.5
RcHm_v2.0_Chr6g0265031 Rosa chinensis HOM05D007001 ORTHO05D005587 1.8e-35 155.2 652 27.8
Cc02_g17350 Coffea canephora HOM05D007001 ORTHO05D005587 4.0e-35 154.1 580 29.0
Rhsim11G0179000 Rhododendron simsii HOM05D007001 ORTHO05D005587 5.2e-35 153.7 318 35.5
FvH4_2g09190 Fragaria vesca HOM05D007001 ORTHO05D005587 8.8e-35 152.9 673 26.7
PGSC0003DMG400000714 Solanum tuberosum HOM05D007001 ORTHO05D005587 5.7e-34 150.2 303 35.6
Atru.chr5.3047 Acer truncatum HOM05D007001 ORTHO05D005587 2.8e-33 147.9 468 28.0
Duzib132G0641 Durio zibethinus HOM05D007001 ORTHO05D005587 1.1e-32 146.0 745 25.1
Sopen01g051970 Solanum pennellii HOM05D007001 ORTHO05D005587 1.1e-32 146.0 310 35.2
Eucgr.G01689 Eucalyptus grandis HOM05D007001 ORTHO05D005587 1.4e-32 145.6 317 35.3
Solyc01g109780.3 Solanum lycopersicum HOM05D007001 ORTHO05D005587 1.4e-32 145.6 310 35.5
CiPaw.06G134300 Carya illinoinensis HOM05D007001 ORTHO05D005587 1.8e-32 145.2 643 28.1
COL.COLO4_25959 Corchorus olitorius HOM05D007001 ORTHO05D005587 9.1e-32 142.9 341 32.3
vmacro02090 Vaccinium macrocarpon HOM05D007001 ORTHO05D005587 9.1e-32 142.9 368 30.7
Nitab4.5_0000308g0260 Nicotiana tabacum HOM05D007001 ORTHO05D005587 2.7e-31 141.4 467 29.6
CiPaw.05G066600 Carya illinoinensis HOM05D007001 ORTHO05D005587 4.5e-31 140.6 342 33.3
Gohir.D12G029100 Gossypium hirsutum HOM05D007001 ORTHO05D005587 5.9e-31 140.2 763 23.5
Thecc.02G082800 Theobroma cacao HOM05D007001 ORTHO05D005587 1.7e-30 138.7 310 31.6
Gorai.008G029800 Gossypium raimondii HOM05D007001 ORTHO05D005587 2.9e-30 137.9 302 31.5
FAN27G0151 Fragaria x ananassa HOM05D007001 ORTHO05D005587 2.5e-29 134.8 294 34.0
Oeu029153.2 Olea europaea HOM05D007001 ORTHO05D005587 2.5e-29 134.8 313 34.2
Oeu055597.1 Olea europaea HOM05D007001 ORTHO05D005587 4.2e-29 134.0 296 33.4
Sabra09G0090900 Salix brachista HOM05D007001 ORTHO05D005587 7.2e-29 133.3 709 25.1
Prupe.8G094200 Prunus persica HOM05D007001 ORTHO05D005587 1.6e-28 132.1 556 28.1
ECA240G0129 Erigeron canadensis HOM05D007001 ORTHO05D005587 2.1e-28 131.7 381 31.2
Sed0007775 Sechium edule HOM05D007001 ORTHO05D005587 2.1e-28 131.7 311 31.8
TWI31G1402 Tripterygium wilfordii HOM05D007001 ORTHO05D005587 2.1e-28 131.7 310 31.0
Lj3g0024948 Lotus japonicus HOM05D007001 ORTHO05D005587 2.7e-28 131.3 375 32.0
Potri.009G118651 Populus trichocarpa HOM05D007001 ORTHO05D005587 2.7e-28 131.3 288 35.8
Medtr4g070420 Medicago truncatula HOM05D007001 ORTHO05D005587 3.6e-28 131.0 316 34.2
Lalb_Chr19g0138701 Lupinus albus HOM05D007001 ORTHO05D005587 6.1e-28 130.2 370 30.8
PGR042G0047 Punica granatum HOM05D007001 ORTHO05D005587 8.0e-28 129.8 361 31.9
FAN15G3137 Fragaria x ananassa HOM05D007001 ORTHO05D005587 1.4e-27 129.0 656 25.9
Cpa.g.sc17.13 Carica papaya HOM05D007001 ORTHO05D005587 6.8e-27 126.7 400 30.0
Peaxi162Scf00016g00623 Petunia axillaris HOM05D007001 ORTHO05D005587 1.2e-26 125.9 300 32.3
EL10Ac9g21706 Beta vulgaris HOM05D007001 ORTHO05D005587 4.4e-26 124.0 309 32.4
MD10G1072800 Malus domestica HOM05D007001 ORTHO05D005587 4.4e-26 124.0 500 30.4
FAN24G0234 Fragaria x ananassa HOM05D007001 ORTHO05D005587 1.3e-25 122.5 656 25.8
MD05G1064100 Malus domestica HOM05D007001 ORTHO05D005587 2.8e-25 121.3 754 24.8
Glyma.12G042500 Glycine max HOM05D007001 ORTHO05D005587 8.3e-25 119.8 312 32.1
AUR62011300 Chenopodium quinoa HOM05D007001 ORTHO05D005587 1.8e-24 118.6 296 30.7
Migut.N01249 Erythranthe guttata HOM05D007001 ORTHO05D005587 1.8e-24 118.6 362 30.1
HanXRQChr03g0074191 Helianthus annuus HOM05D007001 ORTHO05D005587 2.4e-24 118.2 472 28.2
Nitab4.5_0009972g0010 Nicotiana tabacum HOM05D007001 ORTHO05D005587 7.0e-24 116.7 451 28.4
MBI16_g08804_MAGBIO Magnolia biondii HOM05D007001 ORTHO05D005587 1.2e-23 115.9 448 29.0
Phvul.011G044100 Phaseolus vulgaris HOM05D007001 ORTHO05D005587 1.2e-23 115.9 376 31.4
Psat7g184200 Pisum sativum HOM05D007001 ORTHO05D005587 1.2e-23 115.9 402 28.1
Glyma.11G116700 Glycine max HOM05D007001 ORTHO05D005587 1.6e-23 115.5 468 27.6
VMungo1127G1486 Vigna mungo HOM05D007001 ORTHO05D005587 2.7e-23 114.8 374 30.7
Sabra04G0104900 Salix brachista HOM05D007001 ORTHO05D005587 3.5e-23 114.4 284 34.9
Ca_20889_v3 Cicer arietinum L. HOM05D007001 ORTHO05D005587 5.9e-23 113.6 544 27.6
Potri.004G157000 Populus trichocarpa HOM05D007001 ORTHO05D005587 5.9e-23 113.6 387 31.0
AUR62016758 Chenopodium quinoa HOM05D007001 ORTHO05D005587 7.7e-23 113.2 296 30.7
Dinv23502 Davidia involucrata HOM05D007001 ORTHO05D005587 2.3e-22 111.7 513 24.6
Nitab4.5_0008874g0010 Nicotiana tabacum HOM05D007001 ORTHO05D005587 2.3e-22 111.7 391 28.6
arahy.Tifrunner.gnm1.ann1.M1RWF9 Arachis hypogaea HOM05D007001 ORTHO05D005587 2.9e-22 111.3 356 30.9
Aqoxy6G01158 Aquilegia oxysepala HOM05D007001 ORTHO05D005587 6.6e-22 110.2 328 29.3
CsaV3_2G014890 Cucumis sativus L. HOM05D007001 ORTHO05D005587 8.6e-22 109.8 309 30.4
arahy.Tifrunner.gnm1.ann1.I3TCZM Arachis hypogaea HOM05D007001 ORTHO05D005587 1.1e-21 109.4 357 30.3
Nitab4.5_0007728g0020 Nicotiana tabacum HOM05D007001 ORTHO05D005587 1.5e-21 109.0 226 35.0
TPR.G22545 Trifolium pratense HOM05D007001 ORTHO05D005587 2.5e-21 108.2 566 25.4
Ah.01g019240 Amaranthus hybridus HOM05D007001 ORTHO05D005587 7.2e-21 106.7 327 28.7
Peaxi162Scf00003g01121 Petunia axillaris HOM05D007001 ORTHO05D005587 9.5e-21 106.3 388 28.9
Lalb_Chr03g0025591 Lupinus albus HOM05D007001 ORTHO05D005587 4.7e-20 104.0 518 27.2
MELO3C023308.2 Cucumis melo HOM05D007001 ORTHO05D005587 8.0e-20 103.2 663 25.5
PSO675G1875 Papaver somniferum HOM05D007001 ORTHO05D005587 1.0e-19 102.8 691 24.9
CDE06G0685 Ceratophyllum demersum HOM05D007001 ORTHO05D005587 1.8e-19 102.1 228 35.1
Lalb_Chr01g0002461 Lupinus albus HOM05D007001 ORTHO05D005587 2.3e-19 101.7 233 32.2
ClCG11G004280 Citrullus lanatus HOM05D007001 ORTHO05D005587 1.5e-18 99.0 402 27.6
Hund06244 Selenicereus undatus HOM05D007001 ORTHO05D005587 2.2e-17 95.1 335 28.1
PGSC0003DMG400007729 Solanum tuberosum HOM05D007001 ORTHO05D005587 8.3e-17 93.2 241 32.8
Lsat_1_v5_gn_9_108461 Lactuca sativa HOM05D007001 ORTHO05D005587 1.1e-16 92.8 571 25.9
SalBow3G2815 Salvia bowleyana HOM05D007001 ORTHO05D005587 2.0e-15 88.6 372 28.0
Migut.B00223 Erythranthe guttata HOM05D007001 ORTHO05D005587 3.5e-15 87.8 303 29.7
SalBow6G2324 Salvia bowleyana HOM05D007001 ORTHO05D005587 5.9e-15 87.0 372 26.3
Sopen10g023370 Solanum pennellii HOM05D007001 ORTHO05D005587 3.9e-14 84.3 232 31.9
Aa31LG8G13740 Aethionema arabicum HOM05D008776 ORTHO05D005587 2.5e-13 81.6 289 28.4
Solyc10g052650.3 Solanum lycopersicum HOM05D007001 ORTHO05D005587 1.6e-12 79.0 96 41.7
BcaC01g03031 Brassica carinata HOM05D008776 ORTHO05D005587 2.0e-10 72.0 311 24.4
C03p56950 Brassica napus HOM05D008776 ORTHO05D005587 2.0e-10 72.0 311 24.4
BolC3t17973H Brassica oleracea HOM05D008776 ORTHO05D005587 2.0e-10 72.0 311 24.4
DCAR_028976 Daucus carota HOM05D007001 ORTHO05D005587 2.0e-10 72.0 661 22.2
AL3G52490 Arabidopsis lyrata HOM05D008776 ORTHO05D005587 2.6e-10 71.6 291 24.7
Thhalv10022682m.g Eutrema salsugineum HOM05D008776 ORTHO05D005587 4.4e-10 70.9 290 28.3
BcaB03g16349 Brassica carinata HOM05D008776 ORTHO05D005587 5.8e-10 70.5 287 27.5
CDE04G2987 Ceratophyllum demersum HOM05D007001 ORTHO05D005587 5.8e-10 70.5 202 30.2
Carub.0003s3009 Capsella rubella HOM05D008776 ORTHO05D005587 1.3e-09 69.3 289 26.0
DCAR_001566 Daucus carota HOM05D007001 ORTHO05D005587 1.3e-09 69.3 716 21.6
Sp3g29580 Schrenkiella parvula HOM05D008776 ORTHO05D005587 2.2e-09 68.6 309 26.2
BcaB08g34642 Brassica carinata HOM05D008776 ORTHO05D005587 4.9e-09 67.4 288 25.7
AT2G16365 Arabidopsis thaliana HOM05D008776 ORTHO05D005587 8.3e-09 66.6 292 25.3
SGA_v2.0_scaffold125G33736 Striga asiatica HOM05D007001 ORTHO05D005587 3.2e-08 64.7 301 26.9
CDE05G0774 Ceratophyllum demersum HOM05D007001 ORTHO05D005587 4.1e-08 64.3 213 24.9
Sc08g0000600 Simmondsia chinensis HOM05D007001 ORTHO05D005587 4.1e-08 64.3 361 25.5
THA.LOC104807308 Tarenaya hassleriana HOM05D007001 ORTHO05D005587 4.1e-08 64.3 498 23.1
BcaC06g36144 Brassica carinata HOM05D008776 ORTHO05D005587 9.2e-08 63.2 287 25.4
BolC7t41148H Brassica oleracea HOM05D008776 ORTHO05D005587 9.2e-08 63.2 287 25.4
A03p45740 Brassica napus HOM05D008776 ORTHO05D005587 1.2e-07 62.8 296 24.3
A07p04560 Brassica napus HOM05D008776 ORTHO05D005587 2.0e-07 62.0 287 25.4
BraA07t28245Z Brassica rapa HOM05D008776 ORTHO05D005587 2.0e-07 62.0 287 25.4
Os01g0687300 Oryza sativa ssp. japonica HOM05D024721 ORTHO05D025980 2.0e-07 62.0 306 25.8
Oeu020745.1 Olea europaea HOM05D000342 ORTHO05D000217 4.6e-07 60.8 219 29.7
BraA03t13706Z Brassica rapa HOM05D008776 ORTHO05D005587 1.0e-06 59.7 296 24.0
C07p07280 Brassica napus HOM05D008776 ORTHO05D005587 1.7e-06 58.9 288 25.7


User provided reference genes

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