Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO170G6225 Papaver somniferum HOM05D005558 ORTHO05D006832 9.0e-104 380.2 181 100.0
PSO017G1036 Papaver somniferum HOM05D005558 ORTHO05D006832 3.5e-100 368.2 181 95.6
Nn6g31548 Nelumbo nucifera HOM05D005558 ORTHO05D006832 4.3e-82 308.1 182 78.6
Cfa014170 Carpinus fangiana HOM05D005558 ORTHO05D006832 2.2e-81 305.8 186 79.6
QL02p016334 Quercus lobata HOM05D005558 ORTHO05D006832 5.9e-79 297.7 189 77.2
CiPaw.08G079200 Carya illinoinensis HOM05D005558 ORTHO05D006832 7.7e-79 297.4 183 78.1
CiPaw.07G129900 Carya illinoinensis HOM05D005558 ORTHO05D006832 1.3e-78 296.6 190 76.3
ATR0605G185 Amborella trichopoda HOM05D005558 ORTHO05D006832 1.9e-77 292.7 181 77.9
Aqoxy5G00965 Aquilegia oxysepala HOM05D005558 ORTHO05D006832 1.6e-76 289.7 187 73.3
Medtr4g084120 Medicago truncatula HOM05D005558 ORTHO05D006832 3.9e-75 285.0 165 81.2
Hma1.2p1_0914F.1_g236230 Hydrangea macrophylla HOM05D005558 ORTHO05D006832 5.1e-75 284.6 194 71.1
PGR083G0867 Punica granatum HOM05D005558 ORTHO05D006832 5.1e-75 284.6 184 73.9
Solyc12g095770.2 Solanum lycopersicum HOM05D005558 ORTHO05D006832 1.1e-74 283.5 184 72.3
Lsat_1_v5_gn_2_2740 Lactuca sativa HOM05D005558 ORTHO05D006832 1.5e-74 283.1 173 75.1
Lj4g0004166 Lotus japonicus HOM05D005558 ORTHO05D006832 1.5e-74 283.1 173 76.9
TPR.G20977 Trifolium pratense HOM05D005558 ORTHO05D006832 2.0e-74 282.7 182 75.3
Sopen12g031670 Solanum pennellii HOM05D005558 ORTHO05D006832 2.6e-74 282.3 184 71.7
arahy.Tifrunner.gnm1.ann1.8D2970 Arachis hypogaea HOM05D005558 ORTHO05D006832 3.3e-74 282.0 147 85.7
arahy.Tifrunner.gnm1.ann1.GVHP98 Arachis hypogaea HOM05D005558 ORTHO05D006832 3.3e-74 282.0 147 85.7
COL.COLO4_12262 Corchorus olitorius HOM05D005558 ORTHO05D006832 3.3e-74 282.0 184 72.3
RcHm_v2.0_Chr7g0217691 Rosa chinensis HOM05D005558 ORTHO05D006832 4.4e-74 281.6 185 72.4
Ca_18758_v3 Cicer arietinum L. HOM05D005558 ORTHO05D006832 7.4e-74 280.8 185 73.5
Nitab4.5_0003423g0040 Nicotiana tabacum HOM05D005558 ORTHO05D006832 7.4e-74 280.8 187 70.6
Carub.0001s2052 Capsella rubella HOM05D005558 ORTHO05D006832 1.3e-73 280.0 185 72.4
Zm00001eb234660 Zea mays HOM05D005558 ORTHO05D006832 1.3e-73 280.0 142 86.6
Migut.N03003 Erythranthe guttata HOM05D005558 ORTHO05D006832 1.7e-73 279.6 151 80.8
MSTRG.24533 Avicennia marina HOM05D005558 ORTHO05D006832 2.2e-73 279.3 149 82.6
CSS0024776 Camellia sinensis var. sinensis HOM05D005558 ORTHO05D006832 2.2e-73 279.3 194 70.1
CAN.G208.43 Capsicum annuum HOM05D005558 ORTHO05D006832 2.2e-73 279.3 154 81.2
Glyma.07G221200 Glycine max HOM05D005558 ORTHO05D006832 3.7e-73 278.5 182 74.7
arahy.Tifrunner.gnm1.ann1.09GV4T Arachis hypogaea HOM05D005558 ORTHO05D006832 4.8e-73 278.1 183 73.8
arahy.Tifrunner.gnm1.ann1.H4MLSW Arachis hypogaea HOM05D005558 ORTHO05D006832 4.8e-73 278.1 183 73.8
Prupe.5G000800 Prunus persica HOM05D005558 ORTHO05D006832 6.3e-73 277.7 172 76.2
BcaB03g12837 Brassica carinata HOM05D005558 ORTHO05D006832 8.2e-73 277.3 186 72.0
Sc17g0004140 Simmondsia chinensis HOM05D005558 ORTHO05D006832 8.2e-73 277.3 186 71.5
Psat7g129880 Pisum sativum HOM05D005558 ORTHO05D006832 1.1e-72 276.9 165 78.2
FvH4_5g26780 Fragaria vesca HOM05D005558 ORTHO05D006832 1.8e-72 276.2 184 71.2
FAN18G4437 Fragaria x ananassa HOM05D005558 ORTHO05D006832 1.8e-72 276.2 184 71.2
Os02g0187500 Oryza sativa ssp. japonica HOM05D005558 ORTHO05D006832 2.4e-72 275.8 142 85.9
BcaB07g32099 Brassica carinata HOM05D005558 ORTHO05D006832 4.1e-72 275.0 183 71.6
PGSC0003DMG400029397 Solanum tuberosum HOM05D005558 ORTHO05D006832 4.1e-72 275.0 146 82.2
CARHR021510 Cardamine hirsuta HOM05D005558 ORTHO05D006832 7.0e-72 274.2 185 73.0
THA.LOC104813721 Tarenaya hassleriana HOM05D005558 ORTHO05D006832 7.0e-72 274.2 190 71.1
FAN04G1408 Fragaria x ananassa HOM05D005558 ORTHO05D006832 1.2e-71 273.5 184 71.7
Sp1g18730 Schrenkiella parvula HOM05D005558 ORTHO05D006832 1.2e-71 273.5 184 71.7
Thhalv10008709m.g Eutrema salsugineum HOM05D005558 ORTHO05D006832 1.5e-71 273.1 186 71.5
MD06G1057400 Malus domestica HOM05D005558 ORTHO05D006832 1.5e-71 273.1 184 72.8
MD07G1016000 Malus domestica HOM05D005558 ORTHO05D006832 1.5e-71 273.1 143 86.0
AL1G34110 Arabidopsis lyrata HOM05D005558 ORTHO05D006832 2.0e-71 272.7 185 71.4
BraA06t24816Z Brassica rapa HOM05D005558 ORTHO05D006832 2.0e-71 272.7 181 71.3
Peaxi162Scf00064g01430 Petunia axillaris HOM05D005558 ORTHO05D006832 2.0e-71 272.7 169 73.4
BcaC05g26014 Brassica carinata HOM05D005558 ORTHO05D006832 2.6e-71 272.3 183 70.5
Gorai.009G185800 Gossypium raimondii HOM05D005558 ORTHO05D006832 2.6e-71 272.3 184 70.1
Potri.002G001500 Populus trichocarpa HOM05D005558 ORTHO05D006832 2.6e-71 272.3 164 75.6
EL10Ac7g17248 Beta vulgaris HOM05D005558 ORTHO05D006832 3.5e-71 271.9 182 71.4
CANSAT25G0089 Cannabis sativa HOM05D005558 ORTHO05D006832 4.5e-71 271.6 184 70.7
Duzib116G0928 Durio zibethinus HOM05D005558 ORTHO05D006832 4.5e-71 271.6 183 68.9
Glyma.15G161100 Glycine max HOM05D005558 ORTHO05D006832 4.5e-71 271.6 185 69.7
Gohir.A05G177400 Gossypium hirsutum HOM05D005558 ORTHO05D006832 4.5e-71 271.6 184 70.7
Hund05339 Selenicereus undatus HOM05D005558 ORTHO05D006832 4.5e-71 271.6 184 69.6
GSVIVG01013466001 Vitis vinifera HOM05D005558 ORTHO05D006832 4.5e-71 271.6 143 84.6
A06p17130 Brassica napus HOM05D005558 ORTHO05D006832 7.7e-71 270.8 181 71.3
Phvul.002G097800 Phaseolus vulgaris HOM05D005558 ORTHO05D006832 7.7e-71 270.8 174 73.6
Ah.08g212310 Amaranthus hybridus HOM05D005558 ORTHO05D006832 1.0e-70 270.4 179 70.4
Cc10_g00070 Coffea canephora HOM05D005558 ORTHO05D006832 1.0e-70 270.4 144 81.2
Manes.18G000600 Manihot esculenta HOM05D005558 ORTHO05D006832 1.0e-70 270.4 189 69.8
Thecc.08G097300 Theobroma cacao HOM05D005558 ORTHO05D006832 1.0e-70 270.4 185 69.7
Eucgr.F01955 Eucalyptus grandis HOM05D005558 ORTHO05D006832 1.3e-70 270.0 218 63.3
FAN08G1374 Fragaria x ananassa HOM05D005558 ORTHO05D006832 1.3e-70 270.0 184 71.2
Lalb_Chr05g0219661 Lupinus albus HOM05D005558 ORTHO05D006832 1.7e-70 269.6 147 82.3
Gohir.D05G180800 Gossypium hirsutum HOM05D005558 ORTHO05D006832 2.9e-70 268.9 184 69.0
ClCG11G019260 Citrullus lanatus HOM05D005558 ORTHO05D006832 5.0e-70 268.1 176 70.5
BcaC07g39074 Brassica carinata HOM05D005558 ORTHO05D006832 6.5e-70 267.7 169 75.1
BolC8t49687H Brassica oleracea HOM05D005558 ORTHO05D006832 6.5e-70 267.7 169 75.1
A08p29100 Brassica napus HOM05D005558 ORTHO05D006832 8.5e-70 267.3 169 75.1
BraA08t34846Z Brassica rapa HOM05D005558 ORTHO05D006832 8.5e-70 267.3 169 75.1
CsaV3_4G037850 Cucumis sativus L. HOM05D005558 ORTHO05D006832 1.4e-69 266.5 178 70.8
SGA_v2.0_scaffold19G08925 Striga asiatica HOM05D005558 ORTHO05D006832 1.9e-69 266.2 151 79.5
HPP92_021698 Vanilla planifolia HOM05D005558 ORTHO05D006832 1.9e-69 266.2 141 82.3
Lalb_Chr15g0083971 Lupinus albus HOM05D005558 ORTHO05D006832 2.5e-69 265.8 182 69.8
Zm00001eb387340 Zea mays HOM05D005558 ORTHO05D006832 2.5e-69 265.8 142 81.0
TWI12G1391 Tripterygium wilfordii HOM05D005558 ORTHO05D006832 3.2e-69 265.4 178 71.9
Rhsim06G0000500 Rhododendron simsii HOM05D005558 ORTHO05D006832 7.2e-69 264.2 233 58.8
AT1G21065 Arabidopsis thaliana HOM05D005558 ORTHO05D006832 2.1e-68 262.7 168 73.8
SEGI_40156 Sequoiadendron giganteum HOM05D005558 ORTHO05D006832 5.2e-67 258.1 151 76.8
HPP92_017798 Vanilla planifolia HOM05D005558 ORTHO05D006832 8.8e-67 257.3 149 77.2
SMO259G0018 Selaginella moellendorffii HOM05D005558 ORTHO05D006832 1.7e-65 253.1 142 78.2
TAR381G1539 Trochodendron aralioides HOM05D005558 ORTHO05D006832 1.6e-63 246.5 161 74.5
Mapoly0002s0034 Marchantia polymorpha HOM05D005558 ORTHO05D006832 3.5e-63 245.4 142 75.4
Pp3c1_31360 Physcomitrium patens HOM05D005558 ORTHO05D006832 4.5e-63 245.0 144 75.0
Atru.chr13.17 Acer truncatum HOM05D005558 ORTHO05D006832 9.4e-61 237.3 161 72.7
Nitab4.5_0001309g0160 Nicotiana tabacum HOM05D005558 ORTHO05D006832 3.6e-60 235.3 127 80.3
ECA238G0376 Erigeron canadensis HOM05D005558 ORTHO05D006832 5.2e-59 231.5 126 81.7
HanXRQChr14g0427511 Helianthus annuus HOM05D005558 ORTHO05D006832 1.2e-58 230.3 138 76.8
Ciclev10002303m.g Citrus clementina HOM05D005558 ORTHO05D006832 1.5e-58 229.9 158 70.3
Sabra02G0001000 Salix brachista HOM05D005558 ORTHO05D006832 2.6e-58 229.2 159 68.6
Actinidia15539 Actinidia chinensis HOM05D005558 ORTHO05D006832 6.3e-57 224.6 121 81.8
C08p20580 Brassica napus HOM05D005558 ORTHO05D006832 8.3e-57 224.2 147 73.5
BolC5t30678H Brassica oleracea HOM05D000370 ORTHO05D006832 1.8e-56 223.0 140 74.3
MELO3C017079.2 Cucumis melo HOM05D005558 ORTHO05D006832 1.8e-56 223.0 119 82.4
AUR62041000 Chenopodium quinoa HOM05D005558 ORTHO05D006832 7.0e-56 221.1 171 60.8
Sed0017561 Sechium edule HOM05D005558 ORTHO05D006832 2.0e-55 219.5 153 67.3
Cre17.g739300 Chlamydomonas reinhardtii HOM05D005558 ORTHO05D006832 3.5e-55 218.8 140 68.6
Lj4C814G4 Lonicera japonica HOM05D005558 ORTHO05D006832 3.5e-55 218.8 163 65.6
Dinv05517 Davidia involucrata HOM05D005558 ORTHO05D006832 1.3e-54 216.9 152 71.1
SGA_v2.0_scaffold25G11031 Striga asiatica HOM05D005558 ORTHO05D006832 5.0e-54 214.9 136 74.3
Phvul.009G240200 Phaseolus vulgaris HOM05D005558 ORTHO05D006832 2.5e-53 212.6 148 71.6
Prupe.5G000700 Prunus persica HOM05D005558 ORTHO05D006832 2.7e-52 209.1 120 80.0
Os06g0638200 Oryza sativa ssp. japonica HOM05D005558 ORTHO05D006832 1.5e-50 203.4 99 88.9
VMungo0251G0776 Vigna mungo HOM05D005558 ORTHO05D006832 3.7e-49 198.7 128 74.2
Haze_22894 Corylus avellana HOM05D005558 ORTHO05D006832 8.6e-46 187.6 186 53.8
SMO203G0115 Selaginella moellendorffii HOM05D005558 ORTHO05D006832 1.4e-40 170.2 140 55.0
vmacro21735 Vaccinium macrocarpon HOM05D005558 ORTHO05D006832 1.8e-40 169.9 148 61.5
TAR376G0283 Trochodendron aralioides HOM05D005558 ORTHO05D006832 3.1e-40 169.1 90 84.4
SEGI_39286 Sequoiadendron giganteum HOM05D005558 ORTHO05D006832 3.5e-39 165.6 147 51.7
Pp3c2_25680 Physcomitrium patens HOM05D005558 ORTHO05D006832 1.0e-38 164.1 139 54.0
CDE04G3086 Ceratophyllum demersum HOM05D000433 ORTHO05D000443 1.3e-38 163.7 188 48.4
Mapoly0065s0101 Marchantia polymorpha HOM05D005558 ORTHO05D006832 5.0e-38 161.8 140 55.0
Peaxi162Scf00064g01422 Petunia axillaris HOM05D005558 ORTHO05D006832 1.1e-37 160.6 116 65.5
Oeu000735.2 Olea europaea HOM05D005558 ORTHO05D006832 4.3e-37 158.7 90 78.9
Cre01.g043100 Chlamydomonas reinhardtii HOM05D005558 ORTHO05D006832 3.6e-36 155.6 153 49.7
SalBow6G6347 Salvia bowleyana HOM05D005558 ORTHO05D006832 2.9e-33 146.0 153 49.7
Cfa023908 Carpinus fangiana HOM05D005558 ORTHO05D006832 1.9e-32 143.3 143 46.2
CBR_g570 Chara braunii HOM05D005558 ORTHO05D006832 3.9e-30 135.6 85 70.6
AL8G17720 Arabidopsis lyrata HOM05D005558 ORTHO05D006832 1.8e-27 126.7 72 83.3
AL5G16180 Arabidopsis lyrata HOM05D005558 ORTHO05D006832 1.2e-26 124.0 70 82.9
C05p19780 Brassica napus HOM05D005558 ORTHO05D006832 2.4e-24 116.3 59 83.1
MCO09G054 Micromonas commoda HOM05D005558 ORTHO05D006832 2.4e-24 116.3 146 45.2
HPP92_021704 Vanilla planifolia HOM05D005558 ORTHO05D006832 3.0e-22 109.4 118 47.5
BcaC07g39073 Brassica carinata HOM05D005558 ORTHO05D006832 2.1e-20 103.2 53 83.0
Aa31LG7G5210 Aethionema arabicum HOM05D005558 ORTHO05D006832 1.5e-18 97.1 188 36.7
AagrBONN_evm.TU.Sc2ySwM_344.2923 Anthoceros agrestis HOM05D005558 ORTHO05D006832 1.5e-13 80.5 80 48.8
PRCOL_00001425 Prasinoderma coloniale HOM05D005558 ORTHO05D006832 1.6e-12 77.0 154 32.5
Cre09.g396850 Chlamydomonas reinhardtii HOM05D005558 ORTHO05D034498 4.0e-11 72.4 141 34.0
Cpa.g.sc36.94 Carica papaya HOM05D005558 ORTHO05D006832 1.7e-09 67.0 121 37.2
Cpa.g.sc36.93 Carica papaya HOM05D005558 ORTHO05D006832 2.9e-09 66.2 31 87.1
DCAR_022964 Daucus carota HOM05D005558 ORTHO05D006832 4.9e-09 65.5 78 50.0
MCO09G751 Micromonas commoda HOM05D005558 ORTHO05D034498 7.1e-08 61.6 127 29.9
PRCOL_00001511 Prasinoderma coloniale HOM05D005558 ORTHO05D034498 6.0e-07 58.5 147 27.9


User provided reference genes

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