Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO170G6190 Papaver somniferum HOM05D005819 ORTHO05D006780 9.2e-107 390.2 192 100.0
PSO210G2402 Papaver somniferum HOM05D005819 ORTHO05D006780 4.3e-104 381.3 192 97.9
Aqoxy7G03432 Aquilegia oxysepala HOM05D005819 ORTHO05D006780 1.5e-64 250.0 194 66.5
Nn2g10488 Nelumbo nucifera HOM05D005819 ORTHO05D006780 3.1e-62 242.3 194 64.9
Prupe.3G227000 Prunus persica HOM05D005819 ORTHO05D006780 2.5e-59 232.6 140 77.1
GSVIVG01000441001 Vitis vinifera HOM05D005819 ORTHO05D006780 3.2e-59 232.3 141 78.0
Gohir.A03G161900 Gossypium hirsutum HOM05D005819 ORTHO05D006780 2.7e-58 229.2 153 71.9
Gohir.D02G185101 Gossypium hirsutum HOM05D005819 ORTHO05D006780 4.6e-58 228.4 153 71.2
Gorai.005G207400 Gossypium raimondii HOM05D005819 ORTHO05D006780 1.0e-57 227.3 153 70.6
RcHm_v2.0_Chr2g0161141 Rosa chinensis HOM05D005819 ORTHO05D006780 1.0e-57 227.3 186 64.5
CSS0044572 Camellia sinensis var. sinensis HOM05D005819 ORTHO05D006780 1.4e-57 226.9 183 62.8
Glyma.19G118800 Glycine max HOM05D005819 ORTHO05D006780 1.8e-57 226.5 139 74.8
Duzib248G0701 Durio zibethinus HOM05D005819 ORTHO05D006780 3.0e-57 225.7 143 74.8
FAN05G1257 Fragaria x ananassa HOM05D005819 ORTHO05D006780 3.9e-57 225.3 140 77.9
FvH4_6g44280 Fragaria vesca HOM05D005819 ORTHO05D006780 5.1e-57 224.9 141 76.6
FAN14G4258 Fragaria x ananassa HOM05D005819 ORTHO05D006780 5.1e-57 224.9 141 76.6
PGR142G2655 Punica granatum HOM05D005819 ORTHO05D006780 6.7e-57 224.6 137 77.4
Atru.chr6.3097 Acer truncatum HOM05D005819 ORTHO05D006780 8.8e-57 224.2 184 62.5
HanXRQChr17g0543121 Helianthus annuus HOM05D005819 ORTHO05D006780 8.8e-57 224.2 142 73.2
Ca_03448_v3 Cicer arietinum L. HOM05D005819 ORTHO05D006780 1.1e-56 223.8 140 73.6
Ciclev10016814m.g Citrus clementina HOM05D005819 ORTHO05D006780 1.1e-56 223.8 179 64.2
Hma1.2p1_1090F.1_g255750 Hydrangea macrophylla HOM05D005819 ORTHO05D006780 1.9e-56 223.0 139 74.1
MD17G1087700 Malus domestica HOM05D005819 ORTHO05D006780 1.9e-56 223.0 174 66.7
Hund06769 Selenicereus undatus HOM05D005819 ORTHO05D006780 1.9e-56 223.0 141 73.0
Lsat_1_v5_gn_3_41801 Lactuca sativa HOM05D005819 ORTHO05D006780 2.5e-56 222.6 191 61.3
CiPaw.03G166600 Carya illinoinensis HOM05D005819 ORTHO05D006780 3.3e-56 222.2 193 62.7
FAN09G3032 Fragaria x ananassa HOM05D005819 ORTHO05D006780 3.3e-56 222.2 141 76.6
Thecc.02G167000 Theobroma cacao HOM05D005819 ORTHO05D006780 3.3e-56 222.2 186 62.9
Glyma.03G007300 Glycine max HOM05D005819 ORTHO05D006780 5.7e-56 221.5 138 73.2
Manes.18G113901 Manihot esculenta HOM05D005819 ORTHO05D006780 7.4e-56 221.1 146 71.9
PGSC0003DMG400026152 Solanum tuberosum HOM05D005819 ORTHO05D006780 7.4e-56 221.1 197 59.9
TWI18G0421 Tripterygium wilfordii HOM05D005819 ORTHO05D006780 7.4e-56 221.1 191 60.7
Haze_13026 Corylus avellana HOM05D005819 ORTHO05D006780 9.7e-56 220.7 138 74.6
Eucgr.K00886 Eucalyptus grandis HOM05D005819 ORTHO05D006780 9.7e-56 220.7 137 75.2
arahy.Tifrunner.gnm1.ann1.7T7QMX Arachis hypogaea HOM05D005819 ORTHO05D006780 2.2e-55 219.5 140 73.6
CANSAT21G1768 Cannabis sativa HOM05D005819 ORTHO05D006780 2.2e-55 219.5 140 73.6
Sopen07g026700 Solanum pennellii HOM05D005819 ORTHO05D006780 2.2e-55 219.5 195 60.5
Solyc07g053150.3 Solanum lycopersicum HOM05D005819 ORTHO05D006780 2.8e-55 219.2 195 60.0
Nitab4.5_0004360g0020 Nicotiana tabacum HOM05D005819 ORTHO05D006780 4.8e-55 218.4 177 63.3
TAR626G0084 Trochodendron aralioides HOM05D005819 ORTHO05D006780 6.3e-55 218.0 132 77.3
Potri.013G150400 Populus trichocarpa HOM05D005819 ORTHO05D006780 8.2e-55 217.6 141 73.8
CAN.G640.15 Capsicum annuum HOM05D005819 ORTHO05D006780 1.1e-54 217.2 197 57.4
TPR.G7847 Trifolium pratense HOM05D005819 ORTHO05D006780 1.1e-54 217.2 140 71.4
ECA246G1767 Erigeron canadensis HOM05D005819 ORTHO05D006780 1.8e-54 216.5 139 71.9
Lalb_Chr22g0358491 Lupinus albus HOM05D005819 ORTHO05D006780 1.8e-54 216.5 140 73.6
MSTRG.14168 Avicennia marina HOM05D005819 ORTHO05D006780 2.4e-54 216.1 146 70.5
Cc05_g05680 Coffea canephora HOM05D005819 ORTHO05D006780 4.1e-54 215.3 145 71.0
AUR62040308 Chenopodium quinoa HOM05D005819 ORTHO05D006780 1.5e-53 213.4 167 65.3
Medtr6g071520 Medicago truncatula HOM05D005819 ORTHO05D006780 1.5e-53 213.4 139 71.2
Nitab4.5_0006653g0030 Nicotiana tabacum HOM05D005819 ORTHO05D006780 1.5e-53 213.4 206 58.3
FAN02G1820 Fragaria x ananassa HOM05D005819 ORTHO05D006780 4.5e-53 211.8 161 67.1
Phvul.001G107000 Phaseolus vulgaris HOM05D005819 ORTHO05D006780 4.5e-53 211.8 180 60.0
EL10Ac5g12980 Beta vulgaris HOM05D005819 ORTHO05D006780 5.9e-53 211.5 189 59.3
VMungo0647G1299 Vigna mungo HOM05D005819 ORTHO05D006780 5.9e-53 211.5 186 57.0
THA.LOC104806805 Tarenaya hassleriana HOM05D005819 ORTHO05D006780 7.7e-53 211.1 180 60.6
Medtr7g087030 Medicago truncatula HOM05D005819 ORTHO05D006780 1.0e-52 210.7 140 70.7
Sc12g0002590 Simmondsia chinensis HOM05D005819 ORTHO05D006780 1.0e-52 210.7 144 68.1
Lj1g0005576 Lotus japonicus HOM05D005819 ORTHO05D006780 1.3e-52 210.3 140 68.6
Sed0001645 Sechium edule HOM05D005819 ORTHO05D006780 1.3e-52 210.3 139 70.5
AUR62007448 Chenopodium quinoa HOM05D005819 ORTHO05D006780 1.7e-52 209.9 152 66.4
Migut.F00120 Erythranthe guttata HOM05D005819 ORTHO05D006780 1.7e-52 209.9 139 73.4
EL10Ac2g02755 Beta vulgaris HOM05D005819 ORTHO05D006780 2.2e-52 209.5 190 58.4
ClCG02G011330 Citrullus lanatus HOM05D005819 ORTHO05D006780 2.2e-52 209.5 140 69.3
MELO3C013522.2 Cucumis melo HOM05D005819 ORTHO05D006780 2.2e-52 209.5 190 56.8
Ah.12g056190 Amaranthus hybridus HOM05D001579 ORTHO05D006780 2.9e-52 209.1 152 65.8
Sabra13G0120900 Salix brachista HOM05D005819 ORTHO05D006780 3.8e-52 208.8 160 65.0
A09p02550 Brassica napus HOM05D005819 ORTHO05D006780 8.5e-52 207.6 190 57.4
SalBow1G3361 Salvia bowleyana HOM05D005819 ORTHO05D006780 8.5e-52 207.6 163 63.2
SalBow1G8148 Salvia bowleyana HOM05D005819 ORTHO05D006780 8.5e-52 207.6 163 63.2
BcaC04g23988 Brassica carinata HOM05D005819 ORTHO05D006780 1.1e-51 207.2 125 75.2
Sp6g03280 Schrenkiella parvula HOM05D005819 ORTHO05D006780 1.1e-51 207.2 160 63.8
CsaV3_6G012280 Cucumis sativus L. HOM05D005819 ORTHO05D006780 1.4e-51 206.8 139 68.3
BraA09t35901Z Brassica rapa HOM05D005819 ORTHO05D006780 1.9e-51 206.5 181 58.6
Rhsim04G0058700 Rhododendron simsii HOM05D005819 ORTHO05D006780 3.2e-51 205.7 132 72.0
VMungo1383G0784 Vigna mungo HOM05D005819 ORTHO05D006780 3.2e-51 205.7 138 67.4
BcaC01g06695 Brassica carinata HOM05D005819 ORTHO05D006780 4.2e-51 205.3 158 63.3
C03p36930 Brassica napus HOM05D005819 ORTHO05D006780 5.5e-51 204.9 140 68.6
A03p30520 Brassica napus HOM05D005819 ORTHO05D006780 7.2e-51 204.5 158 63.3
BraA03t12233Z Brassica rapa HOM05D005819 ORTHO05D006780 7.2e-51 204.5 194 55.2
SGA_v2.0_scaffold159G37608 Striga asiatica HOM05D005819 ORTHO05D006780 7.2e-51 204.5 185 56.2
AL6G49690 Arabidopsis lyrata HOM05D005819 ORTHO05D006780 1.2e-50 203.8 162 61.7
BolC3t16000H Brassica oleracea HOM05D005819 ORTHO05D006780 1.2e-50 203.8 140 68.6
Thhalv10028999m.g Eutrema salsugineum HOM05D005819 ORTHO05D006780 2.1e-50 203.0 125 73.6
SGA_v2.0_scaffold49G18319 Striga asiatica HOM05D005819 ORTHO05D006780 2.1e-50 203.0 182 58.8
CARHR251690 Cardamine hirsuta HOM05D005819 ORTHO05D006780 2.7e-50 202.6 125 72.0
Carub.0006s3382 Capsella rubella HOM05D005819 ORTHO05D006780 3.6e-50 202.2 125 72.8
AT4G03240 Arabidopsis thaliana HOM05D005819 ORTHO05D006780 1.0e-49 200.7 125 72.0
BcaB01g02514 Brassica carinata HOM05D005819 ORTHO05D006780 1.0e-49 200.7 140 67.1
SHI10263 Sapria himalayana HOM05D005819 ORTHO05D006780 1.4e-49 200.3 126 70.6
SalBow6G6406 Salvia bowleyana HOM05D005819 ORTHO05D006780 1.8e-49 199.9 163 61.3
Os01g0783600 Oryza sativa ssp. japonica HOM05D005819 ORTHO05D006780 1.1e-48 197.2 147 62.6
Zm00001eb151360 Zea mays HOM05D005819 ORTHO05D006780 2.6e-48 196.1 145 61.4
Aa31LG5G2740 Aethionema arabicum HOM05D005819 ORTHO05D006780 3.3e-48 195.7 147 63.3
QL08p035991 Quercus lobata HOM05D005819 ORTHO05D006780 7.4e-48 194.5 167 58.7
Peaxi162Scf00007g01734 Petunia axillaris HOM05D005819 ORTHO05D006780 2.2e-47 193.0 180 55.0
CSS0036944 Camellia sinensis var. sinensis HOM05D005819 ORTHO05D006780 1.8e-46 189.9 111 77.5
unitig_749.g13948 Utricularia gibba HOM05D005819 ORTHO05D006780 2.4e-46 189.5 201 52.2
arahy.Tifrunner.gnm1.ann1.Q06U4P Arachis hypogaea HOM05D005819 ORTHO05D006780 7.0e-46 188.0 189 52.9
SEGI_37806 Sequoiadendron giganteum HOM05D005819 ORTHO05D006780 2.6e-45 186.0 141 59.6
CiPaw.04G121300 Carya illinoinensis HOM05D005819 ORTHO05D006780 2.9e-44 182.6 156 61.5
DCAR_009705 Daucus carota HOM05D005819 ORTHO05D006780 4.2e-43 178.7 226 46.5
CDE09G0293 Ceratophyllum demersum HOM05D007034 ORTHO05D006780 5.5e-43 178.3 111 72.1
Oeu005644.2 Olea europaea HOM05D005819 ORTHO05D006780 2.7e-42 176.0 116 71.6
CDE02G1488 Ceratophyllum demersum HOM05D005819 ORTHO05D006780 3.6e-42 175.6 113 70.8
Oeu037169.1 Olea europaea HOM05D005819 ORTHO05D006780 4.7e-42 175.3 116 68.1
Zm00001eb034710 Zea mays HOM05D005819 ORTHO05D006780 2.3e-41 172.9 134 58.2
MD09G1099400 Malus domestica HOM05D005819 ORTHO05D006780 6.3e-39 164.9 122 66.4
Mapoly0009s0241 Marchantia polymorpha HOM05D005819 ORTHO05D006780 7.0e-38 161.4 142 54.9
vmacro15799 Vaccinium macrocarpon HOM05D005819 ORTHO05D006780 3.5e-37 159.1 94 78.7
DCAR_021205 Daucus carota HOM05D005819 ORTHO05D006780 4.5e-37 158.7 91 79.1
Pp3c9_21390 Physcomitrium patens HOM05D005819 ORTHO05D006780 4.5e-37 158.7 123 54.5
RhsimUnG0197800 Rhododendron simsii HOM05D005819 ORTHO05D006780 7.7e-37 157.9 96 77.1
TWI36G1190 Tripterygium wilfordii HOM05D005819 ORTHO05D006780 1.0e-36 157.5 149 55.7
Dinv13856 Davidia involucrata HOM05D005819 ORTHO05D006780 5.0e-36 155.2 95 77.9
Medtr6g071700 Medicago truncatula HOM05D005819 ORTHO05D006780 8.5e-36 154.5 115 63.5
Dinv02570 Davidia involucrata HOM05D005819 ORTHO05D006780 2.1e-34 149.8 98 76.5
Psat3g085640 Pisum sativum HOM05D005819 ORTHO05D006780 1.4e-33 147.1 96 72.9
SMO140G0069 Selaginella moellendorffii HOM05D005819 ORTHO05D006780 3.3e-32 142.5 109 60.6
BcaB01g01964 Brassica carinata HOM05D005819 ORTHO05D006780 9.7e-32 141.0 92 69.6
AagrBONN_evm.TU.Sc2ySwM_117.2177 Anthoceros agrestis HOM05D005819 ORTHO05D006780 2.8e-31 139.4 109 60.6
Sed0008711 Sechium edule HOM05D005819 ORTHO05D006780 7.0e-30 134.8 90 64.4
CBR_g3856 Chara braunii HOM05D005819 ORTHO05D006780 7.2e-27 124.8 113 49.6
Oeu025479.1 Olea europaea HOM05D005819 ORTHO05D006780 7.2e-27 124.8 73 78.1
HanXRQChr04g0112441 Helianthus annuus HOM05D005819 ORTHO05D006780 1.0e-25 120.9 87 65.5
Cre12.g538350 Chlamydomonas reinhardtii HOM05D005819 ORTHO05D006780 4.0e-25 119.0 115 50.4
HPP92_008010 Vanilla planifolia HOM05D005819 ORTHO05D006780 9.1e-22 107.8 91 59.3
PRCOL_00006727 Prasinoderma coloniale HOM05D005819 ORTHO05D006780 3.8e-20 102.4 95 48.4
MCO13G341 Micromonas commoda HOM05D005819 ORTHO05D006780 5.0e-20 102.1 107 45.8
ATR1132G123 Amborella trichopoda HOM05D005819 ORTHO05D006780 3.6e-18 95.9 125 48.0
COL.COLO4_13056 Corchorus olitorius HOM05D005819 ORTHO05D006780 3.6e-18 95.9 65 72.3
Cfa024975 Carpinus fangiana HOM05D005819 ORTHO05D006780 2.7e-13 79.7 199 31.2
Haze_01489 Corylus avellana HOM05D005819 ORTHO05D006780 2.3e-12 76.6 131 40.5
TAR623G0306 Trochodendron aralioides HOM05D003242 ORTHO05D003593 2.0e-08 63.5 43 69.8
Actinidia30496 Actinidia chinensis HOM05D005819 ORTHO05D006780 2.6e-08 63.2 36 77.8
Lsat_1_v5_gn_8_145740 Lactuca sativa HOM05D005244 ORTHO05D006780 4.4e-08 62.4 97 44.3


User provided reference genes

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