Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO170G6160 Papaver somniferum HOM05D008254 ORTHO05D010423 7.6e-138 493.8 248 100.0
PSO017G7184 Papaver somniferum HOM05D008254 ORTHO05D010423 1.7e-124 449.5 248 91.5
Aqoxy5G01299 Aquilegia oxysepala HOM05D008254 ORTHO05D010423 2.3e-57 226.5 271 49.4
GSVIVG01031792001 Vitis vinifera HOM05D008254 ORTHO05D010423 9.6e-56 221.1 248 50.4
CiPaw.05G054200 Carya illinoinensis HOM05D008254 ORTHO05D010423 1.2e-55 220.7 249 51.8
CSS0044006 Camellia sinensis var. sinensis HOM05D008254 ORTHO05D010423 1.4e-54 217.2 253 52.2
Actinidia00462 Actinidia chinensis HOM05D008254 ORTHO05D010423 2.4e-54 216.5 250 51.2
QL11p037484 Quercus lobata HOM05D008254 ORTHO05D010423 4.0e-54 215.7 246 49.6
vmacro02178 Vaccinium macrocarpon HOM05D008254 ORTHO05D010423 9.0e-54 214.5 249 48.6
Potri.009G105900 Populus trichocarpa HOM05D008254 ORTHO05D010423 7.6e-53 211.5 248 49.6
Duzib132G0754 Durio zibethinus HOM05D008254 ORTHO05D010423 1.4e-51 207.2 243 49.0
Lsat_1_v5_gn_9_110380 Lactuca sativa HOM05D008254 ORTHO05D010423 1.4e-51 207.2 247 48.6
Sabra09G0080900 Salix brachista HOM05D008254 ORTHO05D010423 5.4e-51 205.3 248 46.8
Hund06184 Selenicereus undatus HOM05D008254 ORTHO05D010423 2.7e-50 203.0 248 48.8
TWI31G0737 Tripterygium wilfordii HOM05D008254 ORTHO05D010423 6.0e-50 201.8 246 49.2
Gorai.005G240300 Gossypium raimondii HOM05D008254 ORTHO05D010423 1.3e-49 200.7 249 46.6
Thecc.02G097100 Theobroma cacao HOM05D008254 ORTHO05D010423 2.3e-49 199.9 248 46.4
Gohir.D02G212300 Gossypium hirsutum HOM05D008254 ORTHO05D010423 3.0e-49 199.5 249 46.6
Cfa005450 Carpinus fangiana HOM05D008254 ORTHO05D010423 1.5e-48 197.2 254 48.8
Os08g0477600 Oryza sativa ssp. japonica HOM05D008254 ORTHO05D010423 1.3e-47 194.1 258 45.3
Cc02_g18530 Coffea canephora HOM05D008254 ORTHO05D010423 2.8e-47 193.0 251 45.8
Oeu009760.1 Olea europaea HOM05D008254 ORTHO05D010423 3.6e-47 192.6 248 48.8
HanXRQChr02g0034931 Helianthus annuus HOM05D008254 ORTHO05D010423 8.1e-47 191.4 250 44.4
HanXRQChr02g0034971 Helianthus annuus HOM05D008254 ORTHO05D010423 8.1e-47 191.4 250 44.4
Haze_01907 Corylus avellana HOM05D008254 ORTHO05D010423 4.0e-46 189.1 277 45.5
PGR042G1247 Punica granatum HOM05D008254 ORTHO05D010423 9.0e-46 188.0 248 46.8
COL.COLO4_32691 Corchorus olitorius HOM05D008254 ORTHO05D010423 9.9e-45 184.5 233 46.4
PGSC0003DMG400008243 Solanum tuberosum HOM05D008254 ORTHO05D010423 6.4e-44 181.8 245 46.9
MBI06_g07359_MAGBIO Magnolia biondii HOM05D008254 ORTHO05D010423 8.4e-44 181.4 221 51.1
ECA240G0616 Erigeron canadensis HOM05D008254 ORTHO05D010423 1.4e-43 180.6 246 43.9
Sopen10g022350 Solanum pennellii HOM05D008254 ORTHO05D010423 7.1e-43 178.3 248 46.4
Solyc10g150128.1 Solanum lycopersicum HOM05D008254 ORTHO05D010423 9.3e-43 177.9 248 46.8
Nitab4.5_0002673g0060 Nicotiana tabacum HOM05D008254 ORTHO05D010423 1.6e-42 177.2 247 46.6
SalBow6G2473 Salvia bowleyana HOM05D008254 ORTHO05D010423 2.1e-42 176.8 247 44.1
Migut.B00312 Erythranthe guttata HOM05D008254 ORTHO05D010423 1.0e-41 174.5 247 42.1
Zm00001eb038300 Zea mays HOM05D008254 ORTHO05D010423 9.6e-40 167.9 242 43.0
Cpa.g.sc62.40 Carica papaya HOM05D008254 ORTHO05D010423 2.1e-39 166.8 237 44.7
MSTRG.20136 Avicennia marina HOM05D008254 ORTHO05D010423 3.7e-39 166.0 256 42.2
Rhsim11G0168800 Rhododendron simsii HOM05D000144 ORTHO05D003364 6.2e-39 165.2 247 42.5
Eucgr.G01497 Eucalyptus grandis HOM05D008254 ORTHO05D010423 3.1e-38 162.9 248 40.3
Nn1g05870 Nelumbo nucifera HOM05D008254 ORTHO05D010423 7.6e-37 158.3 202 51.0
Lj9A360G67 Lonicera japonica HOM05D008254 ORTHO05D010423 9.9e-37 157.9 247 41.7
HPP92_002305 Vanilla planifolia HOM05D008254 ORTHO05D010423 4.9e-36 155.6 243 43.2
CANSAT25G2647 Cannabis sativa HOM05D008254 ORTHO05D010423 1.2e-34 151.0 258 41.1
SGA_v2.0_scaffold32G13109 Striga asiatica HOM05D008254 ORTHO05D010423 1.2e-34 151.0 282 36.5
Nitab4.5_0000876g0150 Nicotiana tabacum HOM05D008254 ORTHO05D010423 1.8e-33 147.1 234 44.4
Oeu009762.1 Olea europaea HOM05D008254 ORTHO05D010423 7.4e-32 141.7 256 42.2
Eucgr.B00910 Eucalyptus grandis HOM05D008254 ORTHO05D010423 9.0e-30 134.8 137 54.7
Manes.15G142800 Manihot esculenta HOM05D008254 ORTHO05D010423 2.2e-28 130.2 189 45.5
Pp3c8_11550 Physcomitrium patens HOM05D008254 ORTHO05D010423 2.5e-27 126.7 254 36.2
HanXRQChr02g0034911 Helianthus annuus HOM05D008254 ORTHO05D010423 7.4e-24 115.2 225 35.6
Gohir.A03G191400 Gossypium hirsutum HOM05D008254 ORTHO05D010423 3.7e-23 112.8 187 39.0
HanXRQChr12g0367771 Helianthus annuus HOM05D008254 ORTHO05D010423 7.7e-21 105.1 189 37.6
HanXRQChr08g0217441 Helianthus annuus HOM05D008254 ORTHO05D010423 1.7e-20 104.0 79 62.0
HanXRQChr03g0080261 Helianthus annuus HOM05D008254 ORTHO05D010423 2.9e-20 103.2 191 36.1
HanXRQChr08g0217421 Helianthus annuus HOM05D008254 ORTHO05D010423 2.9e-20 103.2 191 36.1
DCAR_003621 Daucus carota HOM05D008254 ORTHO05D010423 3.8e-20 102.8 192 40.1
SGA_v2.0_scaffold32G13097 Striga asiatica HOM05D008254 ORTHO05D010423 1.4e-17 94.4 241 32.0
Dinv23586 Davidia involucrata HOM05D008254 ORTHO05D010423 2.2e-15 87.0 56 67.9
Nn3g20147 Nelumbo nucifera HOM05D008254 ORTHO05D010423 1.4e-14 84.3 74 58.1
QL11p037441 Quercus lobata HOM05D008254 ORTHO05D010423 3.1e-14 83.2 68 54.4
Oeu037642.1 Olea europaea HOM05D008254 ORTHO05D010423 1.1e-08 64.7 38 65.8
Hma1.2p1_3161F.1_g333460 Hydrangea macrophylla HOM05D008254 ORTHO05D010423 4.4e-08 62.8 170 32.9


User provided reference genes

Program Settings