Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO170G6098 Papaver somniferum HOM05D004876 ORTHO05D005488 5.8e-84 314.3 173 100.0
PSO675G4155 Papaver somniferum HOM05D004876 ORTHO05D005488 4.2e-74 281.6 173 88.4
TAR636G2293 Trochodendron aralioides HOM05D004876 ORTHO05D005488 1.9e-50 203.0 172 64.5
CiPaw.02G093900 Carya illinoinensis HOM05D004876 ORTHO05D005488 7.1e-50 201.1 172 64.5
Atru.chr12.194 Acer truncatum HOM05D004876 ORTHO05D005488 2.7e-49 199.1 179 67.6
CsaV3_5G010740 Cucumis sativus L. HOM05D004876 ORTHO05D005488 1.8e-48 196.4 172 60.5
Lj1g0004349 Lotus japonicus HOM05D004876 ORTHO05D005488 2.3e-48 196.1 172 64.5
Potri.019G061200 Populus trichocarpa HOM05D004876 ORTHO05D005488 2.3e-48 196.1 174 63.8
Prupe.2G265600 Prunus persica HOM05D004876 ORTHO05D005488 2.3e-48 196.1 172 61.0
MBI15_g39395_MAGBIO Magnolia biondii HOM05D004876 ORTHO05D005488 3.0e-48 195.7 170 64.7
CANSAT64G1352 Cannabis sativa HOM05D004876 ORTHO05D005488 3.9e-48 195.3 174 66.1
CiPaw.04G175400 Carya illinoinensis HOM05D004876 ORTHO05D005488 3.9e-48 195.3 172 62.8
Duzib114G0677 Durio zibethinus HOM05D004876 ORTHO05D005488 3.9e-48 195.3 172 59.9
QL08p065087 Quercus lobata HOM05D004876 ORTHO05D005488 5.1e-48 194.9 175 61.7
CANSAT64G2122 Cannabis sativa HOM05D004876 ORTHO05D005488 8.7e-48 194.1 174 65.5
MD01G1169400 Malus domestica HOM05D004876 ORTHO05D005488 8.7e-48 194.1 172 61.6
Phvul.009G042700 Phaseolus vulgaris HOM05D004876 ORTHO05D005488 1.1e-47 193.7 172 62.2
TWI09G0651 Tripterygium wilfordii HOM05D004876 ORTHO05D005488 1.5e-47 193.4 179 60.9
FvH4_7g26120 Fragaria vesca HOM05D004876 ORTHO05D005488 4.3e-47 191.8 172 64.0
FAN10G2920 Fragaria x ananassa HOM05D004876 ORTHO05D005488 4.3e-47 191.8 172 64.0
Lalb_Chr11g0067701 Lupinus albus HOM05D004876 ORTHO05D005488 5.7e-47 191.4 172 65.1
ClCG07G004830 Citrullus lanatus HOM05D004876 ORTHO05D005488 7.4e-47 191.0 172 59.9
Phvul.005G185900 Phaseolus vulgaris HOM05D004876 ORTHO05D005488 9.7e-47 190.7 172 61.6
RcHm_v2.0_Chr1g0372561 Rosa chinensis HOM05D004876 ORTHO05D005488 1.3e-46 190.3 164 65.9
FAN12G2601 Fragaria x ananassa HOM05D004876 ORTHO05D005488 1.6e-46 189.9 172 61.6
Cpa.g.sc128.23 Carica papaya HOM05D004876 ORTHO05D005488 2.2e-46 189.5 172 63.4
Sed0020097 Sechium edule HOM05D004876 ORTHO05D005488 2.2e-46 189.5 172 59.9
MELO3C020110.2 Cucumis melo HOM05D004876 ORTHO05D005488 3.7e-46 188.7 172 59.3
Glyma.06G141500 Glycine max HOM05D004876 ORTHO05D005488 6.3e-46 188.0 173 62.4
THA.LOC104824370 Tarenaya hassleriana HOM05D004876 ORTHO05D005488 1.4e-45 186.8 171 60.2
VMungo1309G0380 Vigna mungo HOM05D004876 ORTHO05D005488 2.4e-45 186.0 169 63.3
PGR142G2846 Punica granatum HOM05D004876 ORTHO05D005488 4.1e-45 185.3 172 58.1
TPR.G13975 Trifolium pratense HOM05D004876 ORTHO05D005488 4.1e-45 185.3 172 61.6
TWI53G0120 Tripterygium wilfordii HOM05D004876 ORTHO05D005488 5.3e-45 184.9 174 59.8
FAN03G2458 Fragaria x ananassa HOM05D004876 ORTHO05D005488 6.9e-45 184.5 172 62.2
FAN06G0183 Fragaria x ananassa HOM05D004876 ORTHO05D005488 7.7e-44 181.0 176 61.4
Psat5g069360 Pisum sativum HOM05D004876 ORTHO05D005488 7.7e-44 181.0 172 65.7
ATR0733G227 Amborella trichopoda HOM05D004876 ORTHO05D005488 1.0e-43 180.6 168 58.3
TPR.G28952 Trifolium pratense HOM05D004876 ORTHO05D005488 1.7e-43 179.9 172 60.5
Os03g0114200 Oryza sativa ssp. japonica HOM05D004876 ORTHO05D005488 2.9e-43 179.1 172 58.1
vmacro06902 Vaccinium macrocarpon HOM05D004876 ORTHO05D005488 3.8e-43 178.7 178 59.6
FvH4_4g04970 Fragaria vesca HOM05D004876 ORTHO05D005488 5.0e-43 178.3 191 55.5
ATR1127G178 Amborella trichopoda HOM05D004876 ORTHO05D005488 1.9e-42 176.4 171 56.1
Migut.F01232 Erythranthe guttata HOM05D004876 ORTHO05D005488 1.9e-42 176.4 172 58.1
Aqoxy6G02070 Aquilegia oxysepala HOM05D004876 ORTHO05D005488 2.5e-42 176.0 174 59.8
HPP92_015433 Vanilla planifolia HOM05D004876 ORTHO05D005488 1.2e-41 173.7 167 58.1
AUR62008150 Chenopodium quinoa HOM05D004876 ORTHO05D005488 1.6e-41 173.3 173 57.8
AUR62028732 Chenopodium quinoa HOM05D004876 ORTHO05D005488 1.6e-41 173.3 173 57.8
Aqoxy2G01672 Aquilegia oxysepala HOM05D004876 ORTHO05D005488 3.6e-41 172.2 174 58.6
EL10Ac5g10661 Beta vulgaris HOM05D004876 ORTHO05D005488 7.9e-41 171.0 178 57.3
A04p31160 Brassica napus HOM05D004876 ORTHO05D005488 1.4e-40 170.2 174 55.7
C04p68560 Brassica napus HOM05D004876 ORTHO05D005488 1.4e-40 170.2 174 55.7
AL4G38670 Arabidopsis lyrata HOM05D004876 ORTHO05D005488 1.8e-40 169.9 174 56.3
BolC4t28355H Brassica oleracea HOM05D004876 ORTHO05D005488 1.8e-40 169.9 174 55.7
Carub.0004s2308 Capsella rubella HOM05D004876 ORTHO05D005488 2.3e-40 169.5 174 56.3
BraA04t18571Z Brassica rapa HOM05D004876 ORTHO05D005488 3.0e-40 169.1 174 55.2
Thecc.10G185000 Theobroma cacao HOM05D004876 ORTHO05D005488 3.0e-40 169.1 180 53.9
Nitab4.5_0006356g0050 Nicotiana tabacum HOM05D004876 ORTHO05D005488 3.9e-40 168.7 172 54.1
BcaB06g29175 Brassica carinata HOM05D004876 ORTHO05D005488 5.1e-40 168.3 177 55.9
Thhalv10017311m.g Eutrema salsugineum HOM05D004876 ORTHO05D005488 6.7e-40 167.9 169 59.2
AL4G34450 Arabidopsis lyrata HOM05D004876 ORTHO05D005488 8.8e-40 167.5 174 55.7
AT2G40780 Arabidopsis thaliana HOM05D004876 ORTHO05D005488 2.0e-39 166.4 174 55.2
Sp4g23100 Schrenkiella parvula HOM05D004876 ORTHO05D005488 2.0e-39 166.4 174 55.2
CARHR135880 Cardamine hirsuta HOM05D004876 ORTHO05D005488 4.3e-39 165.2 176 58.5
Zm00001eb000910 Zea mays HOM05D004876 ORTHO05D005488 5.7e-39 164.9 172 57.0
Manes.10G044800 Manihot esculenta HOM05D004876 ORTHO05D005488 9.7e-39 164.1 174 56.3
Haze_17370 Corylus avellana HOM05D004876 ORTHO05D005488 1.3e-38 163.7 172 54.1
Ciclev10032334m.g Citrus clementina HOM05D004876 ORTHO05D005488 2.2e-38 162.9 161 57.8
Nitab4.5_0000171g0270 Nicotiana tabacum HOM05D004876 ORTHO05D005488 2.8e-38 162.5 172 52.9
CDE07G1038 Ceratophyllum demersum HOM05D004876 ORTHO05D005488 3.7e-38 162.2 174 55.2
Peaxi162Scf00073g02225 Petunia axillaris HOM05D004876 ORTHO05D005488 6.3e-38 161.4 172 52.9
THA.LOC104803220 Tarenaya hassleriana HOM05D004876 ORTHO05D005488 1.8e-37 159.8 174 53.4
Ca_29868_v3 Cicer arietinum L. HOM05D000260 ORTHO05D000318 4.1e-37 158.7 119 68.1
HanXRQChr14g0460541 Helianthus annuus HOM05D004876 ORTHO05D005488 5.3e-37 158.3 168 54.2
Aa31LG3G1350 Aethionema arabicum HOM05D004876 ORTHO05D005488 9.1e-37 157.5 168 58.3
COL.COLO4_19475 Corchorus olitorius HOM05D004876 ORTHO05D005488 9.1e-37 157.5 176 51.7
Gohir.A10G177600 Gossypium hirsutum HOM05D004876 ORTHO05D005488 1.5e-36 156.8 177 52.0
CAN.G1229.8 Capsicum annuum HOM05D004876 ORTHO05D005488 2.6e-36 156.0 171 51.5
Gohir.D10G184200 Gossypium hirsutum HOM05D004876 ORTHO05D005488 2.6e-36 156.0 177 51.4
Gorai.011G206400 Gossypium raimondii HOM05D004876 ORTHO05D005488 2.6e-36 156.0 177 51.4
Dinv37250 Davidia involucrata HOM05D004876 ORTHO05D005488 1.0e-35 154.1 171 52.6
FAN17G0734 Fragaria x ananassa HOM05D004876 ORTHO05D005488 1.0e-35 154.1 245 42.4
CSS0007534 Camellia sinensis var. sinensis HOM05D004876 ORTHO05D005488 1.3e-35 153.7 172 52.3
PGR142G0395 Punica granatum HOM05D004876 ORTHO05D005488 1.3e-35 153.7 161 51.6
Rhsim03G0153600 Rhododendron simsii HOM05D004876 ORTHO05D005488 1.3e-35 153.7 178 52.8
ECA247G1702 Erigeron canadensis HOM05D004876 ORTHO05D008274 1.7e-35 153.3 155 56.8
Duzib106G1237 Durio zibethinus HOM05D004876 ORTHO05D005488 2.9e-35 152.5 172 52.9
Lsat_1_v5_gn_5_104800 Lactuca sativa HOM05D004876 ORTHO05D005488 3.8e-35 152.1 174 54.6
Sc10g0003050 Simmondsia chinensis HOM05D004876 ORTHO05D005488 5.0e-35 151.8 125 63.2
CiPaw.04G175300 Carya illinoinensis HOM05D004876 ORTHO05D005488 6.5e-35 151.4 104 74.0
Sabra19G0074800 Salix brachista HOM05D004876 ORTHO05D005488 1.1e-34 150.6 112 72.3
PGSC0003DMG400011645 Solanum tuberosum HOM05D004876 ORTHO05D005488 7.2e-34 147.9 169 52.1
Lj6g0009237 Lotus japonicus HOM05D004876 ORTHO05D005488 1.6e-33 146.7 172 55.2
Ah.11g051130 Amaranthus hybridus HOM05D004876 ORTHO05D005488 2.7e-33 146.0 162 53.1
Ca_29506_v3 Cicer arietinum L. HOM05D004876 ORTHO05D005488 2.7e-33 146.0 172 52.9
SEGI_18121 Sequoiadendron giganteum HOM05D004876 ORTHO05D005488 3.6e-33 145.6 176 48.9
Cc02_g05210 Coffea canephora HOM05D004876 ORTHO05D005488 4.7e-33 145.2 172 50.6
arahy.Tifrunner.gnm1.ann1.58ULDB Arachis hypogaea HOM05D004876 ORTHO05D005488 6.1e-33 144.8 178 53.9
GSVIVG01038577001 Vitis vinifera HOM05D004876 ORTHO05D005488 6.1e-33 144.8 119 65.5
Dinv21858 Davidia involucrata HOM05D004876 ORTHO05D005488 7.9e-33 144.4 106 70.8
Migut.A00831 Erythranthe guttata HOM05D004876 ORTHO05D005488 7.9e-33 144.4 167 52.1
Oeu006067.1 Olea europaea HOM05D004876 ORTHO05D005488 7.9e-33 144.4 172 50.0
Aqoxy5G02193 Aquilegia oxysepala HOM05D004876 ORTHO05D005488 1.4e-32 143.7 138 57.2
THA.LOC104808402 Tarenaya hassleriana HOM05D004876 ORTHO05D005488 1.4e-32 143.7 135 58.5
Sopen05g030710 Solanum pennellii HOM05D004876 ORTHO05D005488 3.0e-32 142.5 169 49.7
BcaB01g03515 Brassica carinata HOM05D004876 ORTHO05D005488 1.5e-31 140.2 175 49.1
Solyc05g052180.3 Solanum lycopersicum HOM05D004876 ORTHO05D005488 1.5e-31 140.2 164 51.2
MSTRG.8381 Avicennia marina HOM05D004876 ORTHO05D005488 5.7e-31 138.3 173 47.4
Ca_16858_v3 Cicer arietinum L. HOM05D004876 ORTHO05D005488 1.3e-30 137.1 189 48.7
Peaxi162Scf00167g01129 Petunia axillaris HOM05D004876 ORTHO05D005488 1.3e-30 137.1 143 53.8
unitig_736.g22953 Utricularia gibba HOM05D004876 ORTHO05D005488 8.2e-30 134.4 173 47.4
SalBow7G3110 Salvia bowleyana HOM05D004876 ORTHO05D005488 1.4e-29 133.7 177 50.8
Lsat_1_v5_gn_2_126741 Lactuca sativa HOM05D004876 ORTHO05D005488 1.8e-29 133.3 174 51.1
Medtr3g093790 Medicago truncatula HOM05D004876 ORTHO05D005488 2.4e-29 132.9 160 50.6
SGA_v2.0_scaffold2G00887 Striga asiatica HOM05D004876 ORTHO05D005488 3.1e-29 132.5 184 48.9
Eucgr.G03147 Eucalyptus grandis HOM05D004876 ORTHO05D005488 1.2e-28 130.6 176 50.0
Rhsim04G0113200 Rhododendron simsii HOM05D004876 ORTHO05D005488 1.2e-28 130.6 183 47.5
BcaC02g12879 Brassica carinata HOM05D004876 ORTHO05D005488 1.3e-27 127.1 135 54.1
Lj8A52T23 Lonicera japonica HOM05D004876 ORTHO05D005488 2.2e-27 126.3 106 63.2
Nitab4.5_0008902g0030 Nicotiana tabacum HOM05D004876 ORTHO05D005488 9.4e-26 120.9 172 45.3
BcaB05g22749 Brassica carinata HOM05D004876 ORTHO05D005488 1.2e-25 120.6 135 51.1
Mapoly0014s0200 Marchantia polymorpha HOM05D004876 ORTHO05D005488 3.6e-25 119.0 177 43.5
Sopen03g025590 Solanum pennellii HOM05D004876 ORTHO05D005488 3.6e-25 119.0 106 58.5
Nn2g10267 Nelumbo nucifera HOM05D004876 ORTHO05D005488 2.0e-23 113.2 80 72.5
PGSC0003DMG400020604 Solanum tuberosum HOM05D004876 ORTHO05D005488 2.0e-23 113.2 106 55.7
Pp3c16_8280 Physcomitrium patens HOM05D004876 ORTHO05D005488 1.4e-21 107.1 182 41.2
Actinidia13638 Actinidia chinensis HOM05D004876 ORTHO05D005488 3.1e-21 105.9 133 48.9
TPR.G24790 Trifolium pratense HOM05D004876 ORTHO05D005488 7.0e-21 104.8 69 76.8
Nn1g06656 Nelumbo nucifera HOM05D004876 ORTHO05D005488 8.5e-19 97.8 123 55.3
HanXRQChr07g0204961 Helianthus annuus HOM05D004876 ORTHO05D005488 7.2e-18 94.7 107 52.3
AagrBONN_evm.TU.Sc2ySwM_368.2679 Anthoceros agrestis HOM05D004876 ORTHO05D005488 1.6e-17 93.6 170 42.9
C01p26050 Brassica napus HOM05D004876 ORTHO05D005488 3.2e-10 69.3 101 46.5
C03p81600 Brassica napus HOM05D004876 ORTHO05D005488 3.2e-10 69.3 100 47.0
BolC3t20430H Brassica oleracea HOM05D004876 ORTHO05D005488 3.2e-10 69.3 100 47.0
AL4G14440 Arabidopsis lyrata HOM05D004876 ORTHO05D005488 1.2e-09 67.4 62 51.6
Cre03.g155800 Chlamydomonas reinhardtii HOM05D004876 ORTHO05D005488 1.6e-09 67.0 89 40.4
MCO11G196 Micromonas commoda HOM05D004876 ORTHO05D005488 8.0e-09 64.7 110 33.6


User provided reference genes

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