Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO170G6061 Papaver somniferum HOM05D005667 ORTHO05D007299 3.7e-211 738.0 391 100.0
PSO210G4429 Papaver somniferum HOM05D005667 ORTHO05D007299 1.4e-202 709.5 392 94.6
TAR365G0445 Trochodendron aralioides HOM05D005667 ORTHO05D007299 2.1e-158 562.8 393 70.7
TAR627G0762 Trochodendron aralioides HOM05D005667 ORTHO05D007299 6.2e-158 561.2 393 70.7
Nn4g25820 Nelumbo nucifera HOM05D005667 ORTHO05D007299 2.3e-157 559.3 372 72.6
Aqoxy2G02973 Aquilegia oxysepala HOM05D005667 ORTHO05D007299 1.9e-151 539.7 380 74.7
Dinv33042 Davidia involucrata HOM05D005667 ORTHO05D007299 2.0e-148 529.6 393 65.9
QL12p026655 Quercus lobata HOM05D005667 ORTHO05D007299 7.8e-145 517.7 396 68.4
QL12p027280 Quercus lobata HOM05D005667 ORTHO05D007299 1.0e-144 517.3 395 65.1
Atru.chr5.1169 Acer truncatum HOM05D005667 ORTHO05D007299 2.3e-144 516.2 391 64.7
CiPaw.07G107100 Carya illinoinensis HOM05D005667 ORTHO05D007299 3.3e-143 512.3 392 65.8
Hma1.2p1_0209F.1_g088490 Hydrangea macrophylla HOM05D005667 ORTHO05D007299 3.3e-143 512.3 374 70.3
Cfa005935 Carpinus fangiana HOM05D005667 ORTHO05D007299 6.2e-142 508.1 391 63.2
Duzib138G1280 Durio zibethinus HOM05D005667 ORTHO05D007299 1.4e-141 506.9 393 65.6
vmacro14998 Vaccinium macrocarpon HOM05D005667 ORTHO05D007299 3.1e-141 505.8 397 63.0
COL.COLO4_23365 Corchorus olitorius HOM05D005667 ORTHO05D007299 4.0e-141 505.4 393 65.9
FvH4_2g25530 Fragaria vesca HOM05D005667 ORTHO05D007299 8.9e-141 504.2 392 63.8
Actinidia32226 Actinidia chinensis HOM05D005667 ORTHO05D007299 2.0e-140 503.1 393 63.4
Thecc.01G298400 Theobroma cacao HOM05D005667 ORTHO05D007299 5.8e-140 501.5 393 65.4
CSS0019258 Camellia sinensis var. sinensis HOM05D005667 ORTHO05D007299 1.3e-139 500.4 393 69.2
SGA_v2.0_scaffold2G01401 Striga asiatica HOM05D005667 ORTHO05D007299 1.7e-139 500.0 393 66.4
MD11G1306000 Malus domestica HOM05D005667 ORTHO05D007299 4.9e-139 498.4 392 62.2
VMungo1383G3519 Vigna mungo HOM05D005667 ORTHO05D007299 4.9e-139 498.4 392 61.2
Glyma.19G210500 Glycine max HOM05D005667 ORTHO05D007299 6.4e-139 498.0 395 61.3
MD03G1286100 Malus domestica HOM05D005667 ORTHO05D007299 6.4e-139 498.0 392 62.2
Glyma.03G213700 Glycine max HOM05D005667 ORTHO05D007299 2.4e-138 496.1 395 61.3
MELO3C017966.2 Cucumis melo HOM05D005667 ORTHO05D007299 3.2e-138 495.7 394 60.2
Phvul.001G206300 Phaseolus vulgaris HOM05D005667 ORTHO05D007299 4.1e-138 495.4 392 61.5
CANSAT25G0856 Cannabis sativa HOM05D005667 ORTHO05D007299 5.4e-138 495.0 374 63.9
CsaV3_4G000700 Cucumis sativus L. HOM05D005667 ORTHO05D007299 9.2e-138 494.2 394 59.6
Sed0014922 Sechium edule HOM05D005667 ORTHO05D007299 2.1e-137 493.0 390 60.8
Haze_04910 Corylus avellana HOM05D005667 ORTHO05D007299 3.5e-137 492.3 422 58.5
Eucgr.K03468 Eucalyptus grandis HOM05D005667 ORTHO05D007299 4.6e-137 491.9 377 67.9
Psat3g021960 Pisum sativum HOM05D005667 ORTHO05D007299 1.7e-136 490.0 401 61.1
MSTRG.21625 Avicennia marina HOM05D005667 ORTHO05D007299 5.1e-136 488.4 393 67.2
Medtr7g108870 Medicago truncatula HOM05D005667 ORTHO05D007299 1.9e-135 486.5 373 61.9
Medtr8g058590 Medicago truncatula HOM05D005667 ORTHO05D007299 1.9e-135 486.5 373 61.9
Hund18138 Selenicereus undatus HOM05D005667 ORTHO05D007299 2.5e-135 486.1 377 63.4
TPR.G9636 Trifolium pratense HOM05D005667 ORTHO05D007299 2.5e-135 486.1 398 60.6
Lj1g0013419 Lotus japonicus HOM05D005667 ORTHO05D007299 4.3e-135 485.3 397 60.5
Ciclev10020175m.g Citrus clementina HOM05D005667 ORTHO05D007299 5.6e-135 485.0 444 56.5
arahy.Tifrunner.gnm1.ann1.P0XQ2X Arachis hypogaea HOM05D005667 ORTHO05D007299 7.3e-135 484.6 394 60.4
Ca_09151_v3 Cicer arietinum L. HOM05D005667 ORTHO05D007299 6.2e-134 481.5 400 59.2
Lalb_Chr04g0259821 Lupinus albus HOM05D005667 ORTHO05D007299 8.1e-134 481.1 396 60.4
TWI23G0451 Tripterygium wilfordii HOM05D005667 ORTHO05D007299 8.1e-134 481.1 390 61.3
CDE08G0318 Ceratophyllum demersum HOM05D005667 ORTHO05D007299 2.4e-133 479.6 375 65.1
FAN20G0834 Fragaria x ananassa HOM05D005667 ORTHO05D007299 5.2e-133 478.4 392 60.7
arahy.Tifrunner.gnm1.ann1.AQSE8X Arachis hypogaea HOM05D005667 ORTHO05D007299 6.8e-133 478.0 394 60.2
Lalb_Chr18g0047071 Lupinus albus HOM05D005667 ORTHO05D007299 3.4e-132 475.7 396 59.6
Migut.D00204 Erythranthe guttata HOM05D005667 ORTHO05D007299 4.4e-132 475.3 398 65.8
Potri.002G205600 Populus trichocarpa HOM05D005667 ORTHO05D007299 2.2e-131 473.0 376 66.0
TWI59G1070 Tripterygium wilfordii HOM05D005667 ORTHO05D007299 2.2e-131 473.0 394 60.2
DCAR_005798 Daucus carota HOM05D005667 ORTHO05D007299 3.8e-131 472.2 373 63.0
Manes.01G217700 Manihot esculenta HOM05D005667 ORTHO05D007299 4.9e-131 471.9 374 62.6
SalBow3G0511 Salvia bowleyana HOM05D005667 ORTHO05D007299 8.4e-131 471.1 374 65.0
Potri.014G130600 Populus trichocarpa HOM05D005667 ORTHO05D007299 1.1e-130 470.7 373 68.1
Ah.08g213150 Amaranthus hybridus HOM05D005667 ORTHO05D007299 1.9e-130 469.9 398 59.0
AUR62033112 Chenopodium quinoa HOM05D005667 ORTHO05D007299 1.9e-130 469.9 392 59.2
Prupe.8G259400 Prunus persica HOM05D005667 ORTHO05D007299 4.2e-130 468.8 342 65.8
ATR0796G332 Amborella trichopoda HOM05D005667 ORTHO05D007299 1.2e-129 467.2 394 59.6
Cc01_g20730 Coffea canephora HOM05D005667 ORTHO05D007299 2.1e-129 466.5 448 54.0
Nitab4.5_0002469g0040 Nicotiana tabacum HOM05D005667 ORTHO05D007299 2.1e-129 466.5 373 62.7
Sopen09g029820 Solanum pennellii HOM05D005667 ORTHO05D007299 1.0e-128 464.2 373 63.5
AUR62008656 Chenopodium quinoa HOM05D005667 ORTHO05D007299 3.9e-128 462.2 391 59.6
Solyc09g075000.3 Solanum lycopersicum HOM05D005667 ORTHO05D007299 8.7e-128 461.1 373 62.7
HPP92_027132 Vanilla planifolia HOM05D005667 ORTHO05D007299 1.1e-127 460.7 373 64.6
Lsat_1_v5_gn_8_53441 Lactuca sativa HOM05D005667 ORTHO05D007299 1.5e-127 460.3 401 61.8
CARHR143160 Cardamine hirsuta HOM05D005667 ORTHO05D007299 3.3e-127 459.1 375 63.2
Sc05g0004030 Simmondsia chinensis HOM05D005667 ORTHO05D007299 4.3e-127 458.8 392 59.2
Sabra14G0097200 Salix brachista HOM05D005667 ORTHO05D007299 7.3e-127 458.0 373 68.4
THA.LOC104817511 Tarenaya hassleriana HOM05D005667 ORTHO05D007299 7.3e-127 458.0 372 59.7
Sp4g29720 Schrenkiella parvula HOM05D005667 ORTHO05D007299 1.3e-126 457.2 376 59.0
PGSC0003DMG400011397 Solanum tuberosum HOM05D005667 ORTHO05D007299 2.8e-126 456.1 373 61.7
AL4G47370 Arabidopsis lyrata HOM05D005667 ORTHO05D007299 3.6e-126 455.7 391 58.3
AT2G47790 Arabidopsis thaliana HOM05D005667 ORTHO05D007299 3.6e-126 455.7 375 59.7
EL10Ac7g17451 Beta vulgaris HOM05D005667 ORTHO05D007299 8.1e-126 454.5 391 57.3
Sabra02G0153700 Salix brachista HOM05D005667 ORTHO05D007299 2.6e-124 449.5 400 58.5
Gohir.D12G135100 Gossypium hirsutum HOM05D005667 ORTHO05D007299 1.3e-123 447.2 394 62.9
HanXRQChr04g0118041 Helianthus annuus HOM05D005667 ORTHO05D007299 8.4e-123 444.5 395 57.5
Carub.0004s3050 Capsella rubella HOM05D005667 ORTHO05D007299 1.9e-122 443.4 377 58.1
GSVIVG01027987001 Vitis vinifera HOM05D005667 ORTHO05D007299 9.3e-122 441.0 348 62.6
Hma1.2p1_0209F.1_g088500 Hydrangea macrophylla HOM05D005667 ORTHO05D007299 1.2e-121 440.7 428 56.8
Gohir.A12G131200 Gossypium hirsutum HOM05D005667 ORTHO05D007299 3.5e-121 439.1 395 61.8
Gorai.008G146100 Gossypium raimondii HOM05D005667 ORTHO05D007299 7.9e-121 438.0 394 61.9
PGR044G1684 Punica granatum HOM05D005667 ORTHO05D007299 1.0e-120 437.6 395 60.0
ClCG10G010830 Citrullus lanatus HOM05D005667 ORTHO05D007299 3.9e-120 435.6 394 55.1
Thhalv10001494m.g Eutrema salsugineum HOM05D005667 ORTHO05D007299 1.9e-119 433.3 390 58.5
Aa31LG1G29130 Aethionema arabicum HOM05D005667 ORTHO05D007299 1.3e-118 430.6 374 59.6
BcaB06g29498 Brassica carinata HOM05D005667 ORTHO05D007299 3.1e-117 426.0 397 57.7
Nitab4.5_0005515g0060 Nicotiana tabacum HOM05D005667 ORTHO05D007299 4.0e-117 425.6 392 57.1
Lj1C26T7 Lonicera japonica HOM05D005667 ORTHO05D007299 9.0e-117 424.5 324 63.0
C04p72980 Brassica napus HOM05D005667 ORTHO05D007299 4.9e-115 418.7 376 59.6
Peaxi162Scf00001g00492 Petunia axillaris HOM05D005667 ORTHO05D007299 4.9e-115 418.7 342 60.2
A04p35070 Brassica napus HOM05D005667 ORTHO05D007299 6.4e-115 418.3 377 59.9
unitig_0.g1174 Utricularia gibba HOM05D005667 ORTHO05D007299 3.2e-114 416.0 401 55.1
BolC4t28779H Brassica oleracea HOM05D005667 ORTHO05D007299 4.2e-114 415.6 376 59.3
BraA04t18943Z Brassica rapa HOM05D005667 ORTHO05D007299 7.1e-114 414.8 378 59.8
ECA236G1571 Erigeron canadensis HOM05D005667 ORTHO05D007299 1.1e-111 407.5 341 64.2
Actinidia24829 Actinidia chinensis HOM05D005667 ORTHO05D007299 1.6e-110 403.7 393 54.5
Rhsim01G0284200 Rhododendron simsii HOM05D005667 ORTHO05D007299 6.2e-110 401.7 399 53.4
BcaC02g06992 Brassica carinata HOM05D005667 ORTHO05D007299 8.1e-110 401.4 375 54.7
SEGI_23788 Sequoiadendron giganteum HOM05D005667 ORTHO05D007299 3.1e-109 399.4 385 52.5
CSS0024566 Camellia sinensis var. sinensis HOM05D005667 ORTHO05D007299 9.3e-106 387.9 373 54.4
SHI15190 Sapria himalayana HOM05D005667 ORTHO05D007299 6.0e-105 385.2 381 53.5
CSS0050073 Camellia sinensis var. sinensis HOM05D005667 ORTHO05D007299 1.0e-104 384.4 373 54.2
Sc05g0001380 Simmondsia chinensis HOM05D005667 ORTHO05D007299 3.1e-101 372.9 302 60.6
Dinv19706 Davidia involucrata HOM05D005667 ORTHO05D007299 9.0e-93 344.7 267 65.9
Pp3c11_14960 Physcomitrium patens HOM05D005667 ORTHO05D007299 7.7e-92 341.7 384 50.0
Cpa.g.sc9.222 Carica papaya HOM05D005667 ORTHO05D007299 5.1e-88 328.9 273 63.0
Pp3c2_26100 Physcomitrium patens HOM05D005667 ORTHO05D007299 3.1e-85 319.7 380 51.1
Mapoly0153s0027 Marchantia polymorpha HOM05D005667 ORTHO05D007299 4.2e-82 309.3 386 43.5
SMO329G0065 Selaginella moellendorffii HOM05D005667 ORTHO05D007299 1.6e-81 307.4 346 49.4
RcHm_v2.0_Chr6g0293741 Rosa chinensis HOM05D005667 ORTHO05D007299 3.9e-80 302.8 199 72.4
HPP92_021590 Vanilla planifolia HOM05D005667 ORTHO05D007299 1.1e-74 284.6 232 63.8
BcaB06g29495 Brassica carinata HOM05D005667 ORTHO05D007299 8.0e-73 278.5 277 51.6
Medtr8g058557 Medicago truncatula HOM05D005667 ORTHO05D007299 8.0e-73 278.5 222 60.4
Pp3c11_15090 Physcomitrium patens HOM05D005667 ORTHO05D007299 1.6e-68 264.2 297 43.4
Nn3g21456 Nelumbo nucifera HOM05D005667 ORTHO05D007299 1.4e-64 251.1 329 43.2
Actinidia21054 Actinidia chinensis HOM05D005667 ORTHO05D007299 6.8e-56 222.2 153 67.3
AagrBONN_evm.TU.Sc2ySwM_344.2785 Anthoceros agrestis HOM05D005667 ORTHO05D007299 1.8e-53 214.2 237 47.3
Zm00001eb157470 Zea mays HOM05D005667 ORTHO05D007299 2.3e-51 207.2 174 56.9
Os12g0294100 Oryza sativa ssp. japonica HOM05D005667 ORTHO05D007299 4.3e-50 203.0 192 66.1
Cre03.g178050 Chlamydomonas reinhardtii HOM05D005667 ORTHO05D007299 1.3e-43 181.4 358 34.1
Oeu011452.2 Olea europaea HOM05D005667 ORTHO05D007299 1.6e-36 157.9 154 53.2
RcHm_v2.0_Chr6g0293751 Rosa chinensis HOM05D005667 ORTHO05D007299 3.6e-33 146.7 119 60.5
BcaC02g06993 Brassica carinata HOM05D005667 ORTHO05D007299 6.4e-30 136.0 109 63.3
MCO09G319 Micromonas commoda HOM05D005667 ORTHO05D007299 6.4e-30 136.0 379 30.1
PRCOL_00003266 Prasinoderma coloniale HOM05D005667 ORTHO05D007299 4.6e-28 129.8 332 28.3
Migut.G00109 Erythranthe guttata HOM05D005667 ORTHO05D007299 1.5e-18 98.2 65 70.8
CBR_g31107 Chara braunii HOM05D000019 ORTHO05D000048 7.3e-18 95.9 184 32.6
CBR_g34279 Chara braunii HOM05D005667 ORTHO05D007299 4.7e-17 93.2 152 37.5
Migut.D00125 Erythranthe guttata HOM05D005667 ORTHO05D007299 5.4e-13 79.7 179 32.4
CBR_g31109 Chara braunii HOM05D000019 ORTHO05D000048 4.6e-12 76.6 75 44.0
Actinidia13473 Actinidia chinensis HOM05D005667 ORTHO05D000474 9.6e-10 68.9 78 50.0


User provided reference genes

Program Settings