Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO170G6047 Papaver somniferum HOM05D002914 ORTHO05D003196 1.9e-55 219.5 137 100.0
Cfa005429 Carpinus fangiana HOM05D002914 ORTHO05D003196 9.3e-18 94.4 119 52.9
TAR628G0868 Trochodendron aralioides HOM05D002914 ORTHO05D003196 1.3e-16 90.5 137 48.9
Atru.chr13.614 Acer truncatum HOM05D002914 ORTHO05D003196 5.1e-16 88.6 133 37.6
TAR376G1047 Trochodendron aralioides HOM05D002914 ORTHO05D003196 7.3e-15 84.7 123 52.8
Duzib052G1256 Durio zibethinus HOM05D002914 ORTHO05D003196 3.6e-14 82.4 82 48.8
Hma1.2p1_0584F.1_g183120 Hydrangea macrophylla HOM05D002914 ORTHO05D003196 3.6e-14 82.4 125 40.0
Potri.004G144400 Populus trichocarpa HOM05D002914 ORTHO05D003196 8.1e-14 81.3 99 42.4
Thecc.02G096100 Theobroma cacao HOM05D002914 ORTHO05D003196 1.1e-13 80.9 122 50.8
Solyc01g108330.2 Solanum lycopersicum HOM05D002914 ORTHO05D003196 1.4e-13 80.5 96 45.8
CiPaw.05G054900 Carya illinoinensis HOM05D002914 ORTHO05D003196 1.8e-13 80.1 83 66.3
Thecc.08G014700 Theobroma cacao HOM05D002914 ORTHO05D003196 1.8e-13 80.1 47 70.2
Phvul.003G294100 Phaseolus vulgaris HOM05D002914 ORTHO05D003196 2.4e-13 79.7 82 64.6
Aqoxy5G01394 Aquilegia oxysepala HOM05D002914 ORTHO05D003196 3.1e-13 79.3 135 36.3
Dinv42126 Davidia involucrata HOM05D002914 ORTHO05D003196 3.1e-13 79.3 47 70.2
Nn5g30169 Nelumbo nucifera HOM05D002914 ORTHO05D003196 3.1e-13 79.3 117 53.0
Rhsim05G0080600 Rhododendron simsii HOM05D002914 ORTHO05D003196 3.1e-13 79.3 46 73.9
SalBow6G6648 Salvia bowleyana HOM05D002914 ORTHO05D003196 3.1e-13 79.3 47 70.2
COL.COLO4_11718 Corchorus olitorius HOM05D002914 ORTHO05D003196 4.0e-13 79.0 44 72.7
Duzib248G0090 Durio zibethinus HOM05D002914 ORTHO05D003196 4.0e-13 79.0 77 48.1
TAR625G1140 Trochodendron aralioides HOM05D002914 ORTHO05D003196 4.0e-13 79.0 115 40.9
QL11p038331 Quercus lobata HOM05D002914 ORTHO05D003196 5.3e-13 78.6 41 78.0
RcHm_v2.0_Chr6g0259071 Rosa chinensis HOM05D002914 ORTHO05D003196 5.3e-13 78.6 81 50.6
Sopen01g050550 Solanum pennellii HOM05D002914 ORTHO05D003196 6.9e-13 78.2 96 44.8
COL.COLO4_26446 Corchorus olitorius HOM05D002914 ORTHO05D003196 9.0e-13 77.8 81 48.1
Glyma.07G210000 Glycine max HOM05D002914 ORTHO05D003196 9.0e-13 77.8 82 56.1
Nn1g05872 Nelumbo nucifera HOM05D002914 ORTHO05D003196 9.0e-13 77.8 129 55.8
PGSC0003DMG400025804 Solanum tuberosum HOM05D002914 ORTHO05D003196 9.0e-13 77.8 104 44.2
CSS0030933 Camellia sinensis var. sinensis HOM05D002914 ORTHO05D003196 1.2e-12 77.4 46 67.4
CSS0032479 Camellia sinensis var. sinensis HOM05D002914 ORTHO05D003196 1.2e-12 77.4 46 67.4
Medtr4g086780 Medicago truncatula HOM05D002914 ORTHO05D003196 1.2e-12 77.4 77 49.4
Medtr3g101240 Medicago truncatula HOM05D002914 ORTHO05D003196 1.5e-12 77.0 46 71.7
arahy.Tifrunner.gnm1.ann1.2E3RSG Arachis hypogaea HOM05D002914 ORTHO05D003196 2.0e-12 76.6 82 48.8
TWI36G0119 Tripterygium wilfordii HOM05D002914 ORTHO05D003196 2.6e-12 76.3 123 43.9
Ca_18662_v3 Cicer arietinum L. HOM05D002914 ORTHO05D003196 3.4e-12 75.9 41 78.0
Manes.15G143200 Manihot esculenta HOM05D002914 ORTHO05D003196 3.4e-12 75.9 41 78.0
Nitab4.5_0002462g0040 Nicotiana tabacum HOM05D002914 ORTHO05D003196 3.4e-12 75.9 69 52.2
Lalb_Chr16g0384551 Lupinus albus HOM05D002914 ORTHO05D003196 4.5e-12 75.5 47 66.0
Lalb_Chr23g0266911 Lupinus albus HOM05D002914 ORTHO05D003196 4.5e-12 75.5 46 69.6
CiPaw.06G141400 Carya illinoinensis HOM05D002914 ORTHO05D003196 5.8e-12 75.1 82 43.9
DCAR_022064 Daucus carota HOM05D002914 ORTHO05D003196 5.8e-12 75.1 72 50.0
Potri.014G035400 Populus trichocarpa HOM05D002914 ORTHO05D003196 5.8e-12 75.1 43 74.4
ECA236G0292 Erigeron canadensis HOM05D002914 ORTHO05D003196 7.6e-12 74.7 47 70.2
Glyma.02G134900 Glycine max HOM05D002914 ORTHO05D003196 7.6e-12 74.7 78 65.4
Gohir.D06G013700 Gossypium hirsutum HOM05D002914 ORTHO05D003196 7.6e-12 74.7 71 46.5
Oeu013680.1 Olea europaea HOM05D002914 ORTHO05D003196 7.6e-12 74.7 88 47.7
Prupe.8G116500 Prunus persica HOM05D002914 ORTHO05D003196 7.6e-12 74.7 81 63.0
Hma1.2p1_1589F.1_g292395 Hydrangea macrophylla HOM05D002914 ORTHO05D003196 9.9e-12 74.3 82 46.3
Hma1.2p1_2598F.1_g325150 Hydrangea macrophylla HOM05D002914 ORTHO05D003196 9.9e-12 74.3 82 46.3
Sabra04G0095900 Salix brachista HOM05D002914 ORTHO05D003196 9.9e-12 74.3 41 73.2
arahy.Tifrunner.gnm1.ann1.HH3ECB Arachis hypogaea HOM05D002914 ORTHO05D003196 1.7e-11 73.6 46 69.6
Glyma.04G036500 Glycine max HOM05D002914 ORTHO05D003196 1.7e-11 73.6 46 71.7
Gohir.A06G015600 Gossypium hirsutum HOM05D002914 ORTHO05D003196 1.7e-11 73.6 41 65.9
Gorai.010G016300 Gossypium raimondii HOM05D002914 ORTHO05D003196 1.7e-11 73.6 41 65.9
VMungo0251G3532 Vigna mungo HOM05D002914 ORTHO05D003196 1.7e-11 73.6 138 38.4
Ca_15973_v3 Cicer arietinum L. HOM05D002914 ORTHO05D003196 2.2e-11 73.2 42 73.8
Psat5g044840 Pisum sativum HOM05D002914 ORTHO05D003196 2.2e-11 73.2 42 73.8
TPR.G40737 Trifolium pratense HOM05D002914 ORTHO05D003196 2.2e-11 73.2 46 67.4
Cpa.g.sc62.45 Carica papaya HOM05D002914 ORTHO05D003196 2.9e-11 72.8 43 74.4
Migut.B00310 Erythranthe guttata HOM05D002914 ORTHO05D003196 2.9e-11 72.8 41 75.6
Eucgr.I01175 Eucalyptus grandis HOM05D002914 ORTHO05D003196 2.9e-11 72.8 44 68.2
FvH4_2g06840 Fragaria vesca HOM05D002914 ORTHO05D003196 2.9e-11 72.8 42 76.2
FAN24G0092 Fragaria x ananassa HOM05D002914 ORTHO05D003196 2.9e-11 72.8 42 76.2
arahy.Tifrunner.gnm1.ann1.ZME7HS Arachis hypogaea HOM05D002914 ORTHO05D003196 3.8e-11 72.4 38 76.3
FAN20G0574 Fragaria x ananassa HOM05D002914 ORTHO05D003196 3.8e-11 72.4 41 78.0
Lalb_Chr09g0328151 Lupinus albus HOM05D002914 ORTHO05D003196 3.8e-11 72.4 76 56.6
PSO675G1122 Papaver somniferum HOM05D000003 ORTHO05D001026 3.8e-11 72.4 41 73.2
Potri.009G106300 Populus trichocarpa HOM05D002914 ORTHO05D003196 3.8e-11 72.4 43 69.8
CSS0043526 Camellia sinensis var. sinensis HOM05D002914 ORTHO05D003196 4.9e-11 72.0 41 73.2
Nitab4.5_0002673g0030 Nicotiana tabacum HOM05D002914 ORTHO05D003196 4.9e-11 72.0 123 35.0
FAN15G1103 Fragaria x ananassa HOM05D002914 ORTHO05D003196 6.4e-11 71.6 41 78.0
Glyma.06G036600 Glycine max HOM05D002914 ORTHO05D003196 6.4e-11 71.6 46 69.6
Gohir.D13G036200 Gossypium hirsutum HOM05D002914 ORTHO05D003196 6.4e-11 71.6 43 67.4
Gorai.013G040900 Gossypium raimondii HOM05D002914 ORTHO05D003196 6.4e-11 71.6 43 67.4
Oeu003693.1 Olea europaea HOM05D002914 ORTHO05D003196 6.4e-11 71.6 63 50.8
Oeu010582.1 Olea europaea HOM05D002914 ORTHO05D003196 6.4e-11 71.6 63 50.8
Peaxi162Scf00016g00161 Petunia axillaris HOM05D002914 ORTHO05D003196 6.4e-11 71.6 40 72.5
Sabra09G0081200 Salix brachista HOM05D002914 ORTHO05D003196 6.4e-11 71.6 80 56.2
Atru.chr5.2809 Acer truncatum HOM05D002914 ORTHO05D003196 8.4e-11 71.2 81 46.9
HanXRQChr16g0509571 Helianthus annuus HOM05D002914 ORTHO05D003196 8.4e-11 71.2 102 43.1
Lj1g0002449 Lotus japonicus HOM05D002914 ORTHO05D003196 8.4e-11 71.2 83 43.4
PGR142G0527 Punica granatum HOM05D002914 ORTHO05D003196 1.1e-10 70.9 80 58.8
SGA_v2.0_scaffold58G20610 Striga asiatica HOM05D002914 ORTHO05D003196 1.1e-10 70.9 82 42.7
TWI31G1086 Tripterygium wilfordii HOM05D002914 ORTHO05D003196 1.9e-10 70.1 41 70.7
Ciclev10002811m.g Citrus clementina HOM05D002914 ORTHO05D003196 2.4e-10 69.7 45 66.7
ClCG08G015580 Citrullus lanatus HOM05D002914 ORTHO05D003196 3.2e-10 69.3 96 39.6
Gohir.A13G037800 Gossypium hirsutum HOM05D002914 ORTHO05D003196 3.2e-10 69.3 41 68.3
Lalb_Chr05g0219001 Lupinus albus HOM05D002914 ORTHO05D003196 3.2e-10 69.3 80 62.5
Nitab4.5_0000876g0190 Nicotiana tabacum HOM05D002914 ORTHO05D003196 3.2e-10 69.3 46 60.9
MELO3C010895.2 Cucumis melo HOM05D002914 ORTHO05D003196 4.2e-10 68.9 44 63.6
CsaV3_2G028190 Cucumis sativus L. HOM05D002914 ORTHO05D003196 4.2e-10 68.9 44 63.6
Gorai.005G104900 Gossypium raimondii HOM05D002914 ORTHO05D003196 4.2e-10 68.9 82 43.9
Oeu003691.1 Olea europaea HOM05D002914 ORTHO05D003196 4.2e-10 68.9 117 35.0
Cpa.g.sc376.2 Carica papaya HOM05D002914 ORTHO05D003196 5.4e-10 68.6 100 42.0
Lj5P206T48 Lonicera japonica HOM05D002914 ORTHO05D003196 5.4e-10 68.6 84 46.4
Nitab4.5_0000876g0210 Nicotiana tabacum HOM05D002914 ORTHO05D003196 5.4e-10 68.6 96 40.6
HanXRQChr04g0128331 Helianthus annuus HOM05D002914 ORTHO05D003196 7.1e-10 68.2 41 73.2
Gohir.D02G092940 Gossypium hirsutum HOM05D002914 ORTHO05D003196 9.3e-10 67.8 46 60.9
CANSAT25G0897 Cannabis sativa HOM05D002914 ORTHO05D003196 1.2e-09 67.4 46 60.9
Prupe.1G441900 Prunus persica HOM05D002914 ORTHO05D003196 1.2e-09 67.4 94 43.6
FvH4_2g35030 Fragaria vesca HOM05D002914 ORTHO05D003196 1.6e-09 67.0 42 69.0
QL02p006168 Quercus lobata HOM05D002914 ORTHO05D003196 1.6e-09 67.0 95 44.2
Oeu007255.1 Olea europaea HOM05D002914 ORTHO05D003196 2.7e-09 66.2 98 41.8
Psat7g121600 Pisum sativum HOM05D002914 ORTHO05D003196 2.7e-09 66.2 38 65.8
CDE02G0277 Ceratophyllum demersum HOM05D002914 ORTHO05D003196 3.5e-09 65.9 44 61.4
FAN15G3578 Fragaria x ananassa HOM05D002914 ORTHO05D003196 4.6e-09 65.5 42 66.7
Sed0007891 Sechium edule HOM05D002914 ORTHO05D003196 4.6e-09 65.5 89 39.3
CsaV3_7G008810 Cucumis sativus L. HOM05D002914 ORTHO05D003196 7.9e-09 64.7 45 64.4
EL10Ac9g21822 Beta vulgaris HOM05D002914 ORTHO05D003196 1.0e-08 64.3 43 60.5
FAN20G2785 Fragaria x ananassa HOM05D002914 ORTHO05D003196 1.0e-08 64.3 49 59.2
PGR083G2546 Punica granatum HOM05D002914 ORTHO05D003196 1.0e-08 64.3 48 60.4
ATR0225G004 Amborella trichopoda HOM05D002914 ORTHO05D003196 1.8e-08 63.5 94 39.4
Manes.05G170100 Manihot esculenta HOM05D002914 ORTHO05D003196 1.8e-08 63.5 35 74.3
RcHm_v2.0_Chr6g0306971 Rosa chinensis HOM05D002914 ORTHO05D003196 1.8e-08 63.5 57 50.9
SEGI_00607 Sequoiadendron giganteum HOM05D002914 ORTHO05D003196 1.8e-08 63.5 41 63.4
THA.LOC104803788 Tarenaya hassleriana HOM05D002914 ORTHO05D003196 1.8e-08 63.5 38 60.5
HPP92_003444 Vanilla planifolia HOM05D002914 ORTHO05D003196 1.8e-08 63.5 46 50.0
CDE01G0545 Ceratophyllum demersum HOM05D000767 ORTHO05D003196 2.3e-08 63.2 41 63.4
Gohir.A03G191200 Gossypium hirsutum HOM05D002914 ORTHO05D003196 2.3e-08 63.2 86 46.5
ClCG02G005720 Citrullus lanatus HOM05D002914 ORTHO05D003196 3.0e-08 62.8 42 66.7
MELO3C028578.2 Cucumis melo HOM05D002914 ORTHO05D003196 3.0e-08 62.8 42 66.7
Sc15g0006440 Simmondsia chinensis HOM05D002914 ORTHO05D003196 3.9e-08 62.4 38 73.7
SEGI_40351 Sequoiadendron giganteum HOM05D002914 ORTHO05D003196 6.7e-08 61.6 37 67.6
Gorai.005G240100 Gossypium raimondii HOM05D002914 ORTHO05D003196 8.7e-08 61.2 86 50.0
Aa31LG5G9350 Aethionema arabicum HOM05D002914 ORTHO05D003196 1.1e-07 60.8 98 35.7
CANSAT80G1635 Cannabis sativa HOM05D002914 ORTHO05D003196 1.1e-07 60.8 41 63.4
Prupe.7G063700 Prunus persica HOM05D002914 ORTHO05D003196 1.1e-07 60.8 46 52.2
FAN27G2590 Fragaria x ananassa HOM05D002914 ORTHO05D003196 1.5e-07 60.5 39 64.1
Sp4g07710 Schrenkiella parvula HOM05D002914 ORTHO05D003196 1.5e-07 60.5 41 56.1
Sed0019897 Sechium edule HOM05D002914 ORTHO05D003196 1.5e-07 60.5 94 39.4
Nitab4.5_0005892g0010 Nicotiana tabacum HOM05D002914 ORTHO05D003196 1.9e-07 60.1 42 59.5
Phvul.001G135000 Phaseolus vulgaris HOM05D002914 ORTHO05D003196 1.9e-07 60.1 44 56.8
CSS0032433 Camellia sinensis var. sinensis HOM05D002914 ORTHO05D003196 2.5e-07 59.7 69 39.1
MBI04_g44434_MAGBIO Magnolia biondii HOM05D002914 ORTHO05D003196 2.5e-07 59.7 44 54.5
Sc08g0000120 Simmondsia chinensis HOM05D002914 ORTHO05D003196 2.5e-07 59.7 80 51.2
TPR.G27766 Trifolium pratense HOM05D002914 ORTHO05D003196 2.5e-07 59.7 44 56.8
Ah.01g020080 Amaranthus hybridus HOM05D002914 ORTHO05D003196 3.3e-07 59.3 41 56.1
AT2G26520 Arabidopsis thaliana HOM05D002914 ORTHO05D003196 3.3e-07 59.3 41 58.5
VMungo1383G1568 Vigna mungo HOM05D002914 ORTHO05D003196 3.3e-07 59.3 44 56.8
Aqoxy6G00878 Aquilegia oxysepala HOM05D002914 ORTHO05D003196 4.3e-07 58.9 43 60.5
AL4G19370 Arabidopsis lyrata HOM05D002914 ORTHO05D003196 4.3e-07 58.9 43 53.5
Dinv18053 Davidia involucrata HOM05D002914 ORTHO05D003196 4.3e-07 58.9 69 39.1
Peaxi162Scf00493g00035 Petunia axillaris HOM05D002914 ORTHO05D003196 4.3e-07 58.9 41 61.0
RcHm_v2.0_Chr3g0481701 Rosa chinensis HOM05D002914 ORTHO05D003196 4.3e-07 58.9 46 54.3
HPP92_007074 Vanilla planifolia HOM05D002914 ORTHO05D003196 4.3e-07 58.9 45 51.1
Carub.0004s0669 Capsella rubella HOM05D002914 ORTHO05D003196 5.6e-07 58.5 44 54.5
Gohir.D02G212150 Gossypium hirsutum HOM05D002914 ORTHO05D003196 5.6e-07 58.5 82 48.8
Lsat_1_v5_gn_5_161660 Lactuca sativa HOM05D002914 ORTHO05D003196 5.6e-07 58.5 65 38.5
Atru.chr1.1072 Acer truncatum HOM05D002914 ORTHO05D003196 7.4e-07 58.2 46 52.2
Ca_08467_v3 Cicer arietinum L. HOM05D002914 ORTHO05D003196 7.4e-07 58.2 47 53.2
FvH4_6g23590 Fragaria vesca HOM05D002914 ORTHO05D003196 7.4e-07 58.2 46 54.3
Thecc.05G158000 Theobroma cacao HOM05D002914 ORTHO05D003196 7.4e-07 58.2 46 50.0
Glyma.19G140500 Glycine max HOM05D002914 ORTHO05D003196 9.6e-07 57.8 39 61.5
SGA_v2.0_scaffold105G30420 Striga asiatica HOM05D002914 ORTHO05D003196 9.6e-07 57.8 47 51.1
Sopen04g007610 Solanum pennellii HOM05D002914 ORTHO05D003196 1.3e-06 57.4 49 55.1
COL.COLO4_28237 Corchorus olitorius HOM05D002914 ORTHO05D003196 1.6e-06 57.0 41 53.7
Medtr7g091830 Medicago truncatula HOM05D002914 ORTHO05D003196 1.6e-06 57.0 44 54.5
TAR623G0040 Trochodendron aralioides HOM05D002914 ORTHO05D003196 1.6e-06 57.0 46 52.2
Ah.05g168910 Amaranthus hybridus HOM05D002914 ORTHO05D003196 2.1e-06 56.6 42 57.1
Duzib093G1261 Durio zibethinus HOM05D002914 ORTHO05D003196 2.1e-06 56.6 41 53.7
FAN09G0984 Fragaria x ananassa HOM05D002914 ORTHO05D003196 2.1e-06 56.6 46 52.2
Gohir.A09G123100 Gossypium hirsutum HOM05D002914 ORTHO05D003196 2.1e-06 56.6 46 50.0
Gohir.D09G120100 Gossypium hirsutum HOM05D002914 ORTHO05D003196 2.1e-06 56.6 41 53.7
Gorai.006G137500 Gossypium raimondii HOM05D002914 ORTHO05D003196 2.1e-06 56.6 46 50.0
Hma1.2p1_1847F.1_g305210 Hydrangea macrophylla HOM05D002914 ORTHO05D003196 2.1e-06 56.6 38 57.9
Lalb_Chr20g0110761 Lupinus albus HOM05D002914 ORTHO05D003196 2.1e-06 56.6 39 59.0
TWI74G1608 Tripterygium wilfordii HOM05D002914 ORTHO05D003196 2.1e-06 56.6 41 53.7
CiPaw.09G037100 Carya illinoinensis HOM05D002914 ORTHO05D003196 2.8e-06 56.2 46 50.0
Solyc04g015540.1 Solanum lycopersicum HOM05D002914 ORTHO05D003196 2.8e-06 56.2 41 58.5
PGSC0003DMG400027270 Solanum tuberosum HOM05D002914 ORTHO05D003196 2.8e-06 56.2 49 53.1
Aqoxy2G00187 Aquilegia oxysepala HOM05D002914 ORTHO05D003196 4.8e-06 55.5 46 45.7
Manes.09G023600 Manihot esculenta HOM05D002914 ORTHO05D003196 4.8e-06 55.5 46 47.8
Oeu000823.1 Olea europaea HOM05D002914 ORTHO05D003196 4.8e-06 55.5 41 53.7
EL10Ac3g07073 Beta vulgaris HOM05D002914 ORTHO05D003196 6.2e-06 55.1 38 55.3
Ciclev10006230m.g Citrus clementina HOM05D002914 ORTHO05D003196 6.2e-06 55.1 39 53.8
Nn2g15303 Nelumbo nucifera HOM05D002914 ORTHO05D003196 6.2e-06 55.1 46 47.8
Psat3g072240 Pisum sativum HOM05D002914 ORTHO05D003196 6.2e-06 55.1 38 60.5
Sed0010504 Sechium edule HOM05D002914 ORTHO05D003196 6.2e-06 55.1 47 51.1


User provided reference genes

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