Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO170G5992 Papaver somniferum HOM05D003764 ORTHO05D004356 3.8e-255 884.4 464 100.0
PSO210G7283 Papaver somniferum HOM05D003764 ORTHO05D004356 3.4e-248 861.3 463 92.9
PSO017G3905 Papaver somniferum HOM05D003764 ORTHO05D004356 6.4e-178 627.9 450 74.4
PSO170G6284 Papaver somniferum HOM05D003764 ORTHO05D004356 6.4e-178 627.9 452 71.5
PSO017G1302 Papaver somniferum HOM05D003764 ORTHO05D004356 2.4e-177 625.9 449 72.2
PSO017G3919 Papaver somniferum HOM05D003764 ORTHO05D004356 7.8e-176 620.9 451 72.9
PSO170G2421 Papaver somniferum HOM05D003764 ORTHO05D004356 1.9e-174 616.3 450 72.2
PSO017G1063 Papaver somniferum HOM05D003764 ORTHO05D004356 5.6e-174 614.8 452 71.0
PSO170G3515 Papaver somniferum HOM05D003764 ORTHO05D004356 1.2e-173 613.6 451 72.5
PSO104G0104 Papaver somniferum HOM05D003764 ORTHO05D004356 2.8e-173 612.5 452 72.3
PSO170G4333 Papaver somniferum HOM05D003764 ORTHO05D004356 2.2e-170 602.8 449 69.7
PSO017G4841 Papaver somniferum HOM05D003764 ORTHO05D004356 1.4e-169 600.1 451 69.2
Dinv31931 Davidia involucrata HOM05D003764 ORTHO05D004356 3.1e-164 582.4 457 63.7
Nn5g30922 Nelumbo nucifera HOM05D003764 ORTHO05D004356 3.1e-164 582.4 443 65.9
PSO017G1698 Papaver somniferum HOM05D003764 ORTHO05D004356 1.5e-163 580.1 454 68.7
PSO170G1328 Papaver somniferum HOM05D003764 ORTHO05D004356 9.2e-161 570.9 448 66.5
Nn6g31748 Nelumbo nucifera HOM05D003764 ORTHO05D004356 2.7e-160 569.3 453 62.3
GSVIVG01008681001 Vitis vinifera HOM05D003764 ORTHO05D004356 3.5e-160 568.9 436 64.0
Ciclev10001182m.g Citrus clementina HOM05D003764 ORTHO05D004356 1.3e-159 567.0 453 63.8
QL02p013934 Quercus lobata HOM05D003764 ORTHO05D004356 8.6e-159 564.3 459 61.7
Haze_22757 Corylus avellana HOM05D003764 ORTHO05D004356 1.1e-156 557.4 447 62.4
TAR628G1614 Trochodendron aralioides HOM05D003764 ORTHO05D004356 4.0e-156 555.4 350 74.3
Manes.05G135000 Manihot esculenta HOM05D003764 ORTHO05D004356 4.4e-155 552.0 441 63.0
CANSAT25G3149 Cannabis sativa HOM05D003764 ORTHO05D004356 6.4e-154 548.1 442 60.4
Manes.18G006000 Manihot esculenta HOM05D003764 ORTHO05D004356 5.4e-153 545.0 456 60.1
TWI56G0154 Tripterygium wilfordii HOM05D003764 ORTHO05D004356 5.4e-153 545.0 456 58.3
RcHm_v2.0_Chr6g0304171 Rosa chinensis HOM05D003764 ORTHO05D004356 1.2e-152 543.9 444 62.2
FAN27G3424 Fragaria x ananassa HOM05D003764 ORTHO05D004356 1.6e-152 543.5 452 61.7
FAN15G2102 Fragaria x ananassa HOM05D003764 ORTHO05D004356 7.8e-152 541.2 452 61.3
Actinidia15487 Actinidia chinensis HOM05D003764 ORTHO05D004356 2.3e-151 539.7 457 59.7
Prupe.1G355100 Prunus persica HOM05D003764 ORTHO05D004356 3.9e-151 538.9 436 61.9
vmacro21825 Vaccinium macrocarpon HOM05D003764 ORTHO05D004356 3.9e-151 538.9 449 62.1
Potri.005G249600 Populus trichocarpa HOM05D003764 ORTHO05D004356 1.1e-150 537.3 436 63.3
FvH4_2g37560 Fragaria vesca HOM05D003764 ORTHO05D004356 1.5e-150 537.0 452 61.3
CiPaw.07G139600 Carya illinoinensis HOM05D003764 ORTHO05D004356 5.6e-150 535.0 447 60.2
MD08G1003100 Malus domestica HOM05D003764 ORTHO05D004356 5.6e-150 535.0 461 59.0
Eucgr.F01754 Eucalyptus grandis HOM05D003764 ORTHO05D004356 1.4e-148 530.4 443 61.4
VMungo1309G0568 Vigna mungo HOM05D003764 ORTHO05D004356 5.2e-148 528.5 460 58.5
Lj1g0016047 Lotus japonicus HOM05D003764 ORTHO05D004356 1.2e-147 527.3 448 57.8
CANSAT80G1902 Cannabis sativa HOM05D003764 ORTHO05D004356 2.0e-147 526.6 451 60.1
Aa31LG4G6340 Aethionema arabicum HOM05D003764 ORTHO05D004356 2.6e-147 526.2 445 58.9
Aqoxy6G01751 Aquilegia oxysepala HOM05D003764 ORTHO05D004356 2.6e-147 526.2 436 59.4
Sp5g31390 Schrenkiella parvula HOM05D003764 ORTHO05D004356 3.4e-147 525.8 452 58.4
Actinidia17035 Actinidia chinensis HOM05D003764 ORTHO05D004356 4.4e-147 525.4 444 59.2
Duzib116G0421 Durio zibethinus HOM05D003764 ORTHO05D004356 9.9e-147 524.2 457 59.3
Peaxi162Scf00064g01131 Petunia axillaris HOM05D003764 ORTHO05D004356 9.9e-147 524.2 435 58.4
AT1G76250 Arabidopsis thaliana HOM05D003764 ORTHO05D004356 2.2e-146 523.1 450 58.0
Sabra05G0193100 Salix brachista HOM05D003764 ORTHO05D004356 2.2e-146 523.1 453 59.6
Phvul.009G021800 Phaseolus vulgaris HOM05D003764 ORTHO05D004356 6.4e-146 521.5 440 59.3
Potri.002G011400 Populus trichocarpa HOM05D003764 ORTHO05D004356 8.4e-146 521.2 436 62.2
PGSC0003DMG400009974 Solanum tuberosum HOM05D003764 ORTHO05D004356 1.1e-145 520.8 440 58.4
Migut.C00949 Erythranthe guttata HOM05D003764 ORTHO05D004356 1.4e-145 520.4 344 69.8
Lj4A804T73 Lonicera japonica HOM05D003764 ORTHO05D004356 1.4e-145 520.4 439 60.8
BcaC08g47274 Brassica carinata HOM05D003764 ORTHO05D004356 4.2e-145 518.8 456 57.5
C06p50220 Brassica napus HOM05D003764 ORTHO05D004356 4.2e-145 518.8 456 57.5
BolC6t40061H Brassica oleracea HOM05D003764 ORTHO05D004356 4.2e-145 518.8 456 57.5
BraA07t31712Z Brassica rapa HOM05D003764 ORTHO05D004356 5.4e-145 518.5 456 57.5
Migut.C00953 Erythranthe guttata HOM05D003764 ORTHO05D004356 7.1e-145 518.1 344 69.5
Glyma.04G018600 Glycine max HOM05D003764 ORTHO05D004356 7.1e-145 518.1 442 58.6
Gorai.002G118500 Gossypium raimondii HOM05D003764 ORTHO05D004356 7.1e-145 518.1 448 58.3
Nitab4.5_0000588g0130 Nicotiana tabacum HOM05D003764 ORTHO05D004356 9.3e-145 517.7 444 59.9
A07p41820 Brassica napus HOM05D003764 ORTHO05D004356 1.2e-144 517.3 456 57.2
Gohir.D01G093100 Gossypium hirsutum HOM05D003764 ORTHO05D004356 1.6e-144 516.9 448 58.3
Thhalv10018564m.g Eutrema salsugineum HOM05D003764 ORTHO05D004356 3.5e-144 515.8 446 57.4
Solyc12g094550.2 Solanum lycopersicum HOM05D003764 ORTHO05D004356 4.6e-144 515.4 438 58.7
Thecc.08G057700 Theobroma cacao HOM05D003764 ORTHO05D004356 4.6e-144 515.4 459 56.4
Oeu035836.1 Olea europaea HOM05D003764 ORTHO05D004356 7.8e-144 514.6 462 55.8
Peaxi162Scf00104g00322 Petunia axillaris HOM05D003764 ORTHO05D004356 7.8e-144 514.6 436 58.0
TPR.G38113 Trifolium pratense HOM05D003764 ORTHO05D004356 1.3e-143 513.8 456 54.8
Ca_15440_v3 Cicer arietinum L. HOM05D003764 ORTHO05D004356 2.3e-143 513.1 443 56.4
PGR031G0670 Punica granatum HOM05D003764 ORTHO05D004356 3.0e-143 512.7 436 58.9
Sabra02G0008800 Salix brachista HOM05D003764 ORTHO05D004356 3.0e-143 512.7 436 61.2
BcaC08g47123 Brassica carinata HOM05D003764 ORTHO05D004356 3.9e-143 512.3 456 57.5
Rhsim06G0008200 Rhododendron simsii HOM05D003764 ORTHO05D004356 3.9e-143 512.3 425 59.8
PGSC0003DMG400029320 Solanum tuberosum HOM05D003764 ORTHO05D004356 5.1e-143 511.9 443 57.8
Sopen12g031450 Solanum pennellii HOM05D003764 ORTHO05D004356 1.5e-142 510.4 438 58.0
Glyma.06G018900 Glycine max HOM05D003764 ORTHO05D004356 3.3e-142 509.2 446 57.2
Oeu021826.1 Olea europaea HOM05D003764 ORTHO05D004356 7.3e-142 508.1 451 57.2
COL.COLO4_03998 Corchorus olitorius HOM05D003764 ORTHO05D004356 9.6e-142 507.7 440 58.2
Carub.0002s2314 Capsella rubella HOM05D003764 ORTHO05D004356 1.6e-141 506.9 451 56.8
Lalb_Chr11g0061681 Lupinus albus HOM05D003764 ORTHO05D004356 2.8e-141 506.1 346 65.6
Gohir.A01G106600 Gossypium hirsutum HOM05D003764 ORTHO05D004356 3.6e-141 505.8 439 58.3
Solyc04g082280.3 Solanum lycopersicum HOM05D003764 ORTHO05D004356 1.8e-140 503.4 350 66.6
arahy.Tifrunner.gnm1.ann1.I18LAP Arachis hypogaea HOM05D003764 ORTHO05D004356 3.1e-140 502.7 448 56.9
Nitab4.5_0000699g0100 Nicotiana tabacum HOM05D003764 ORTHO05D004356 4.0e-140 502.3 346 65.9
BcaB02g07057 Brassica carinata HOM05D003764 ORTHO05D004356 5.3e-140 501.9 450 56.9
Cc10_g00740 Coffea canephora HOM05D003764 ORTHO05D004356 5.3e-140 501.9 447 56.6
Sopen04g035900 Solanum pennellii HOM05D003764 ORTHO05D004356 5.3e-140 501.9 371 63.6
AUR62043557 Chenopodium quinoa HOM05D003764 ORTHO05D004356 6.9e-140 501.5 355 65.6
arahy.Tifrunner.gnm1.ann1.CSAI9D Arachis hypogaea HOM05D003764 ORTHO05D004356 9.0e-140 501.1 448 56.7
BcaC08g45536 Brassica carinata HOM05D003764 ORTHO05D004356 9.0e-140 501.1 446 56.5
C06p32120 Brassica napus HOM05D003764 ORTHO05D004356 9.0e-140 501.1 446 56.5
BolC6t38338H Brassica oleracea HOM05D003764 ORTHO05D004356 9.0e-140 501.1 446 56.5
Medtr3g115180 Medicago truncatula HOM05D003764 ORTHO05D004356 2.0e-139 500.0 434 55.8
MBI08_g19981_MAGBIO Magnolia biondii HOM05D003764 ORTHO05D004356 4.4e-139 498.8 434 58.1
CARHR069810 Cardamine hirsuta HOM05D003764 ORTHO05D004356 5.8e-139 498.4 354 64.4
Nitab4.5_0003544g0010 Nicotiana tabacum HOM05D003764 ORTHO05D004356 5.8e-139 498.4 346 65.9
ClCG11G018640 Citrullus lanatus HOM05D003764 ORTHO05D004356 7.6e-139 498.0 445 55.7
Ah.00g000380 Amaranthus hybridus HOM05D003764 ORTHO05D004356 9.9e-139 497.7 349 66.5
BraA07t30497Z Brassica rapa HOM05D003764 ORTHO05D004356 2.9e-138 496.1 450 55.8
Lalb_Chr23g0265831 Lupinus albus HOM05D003764 ORTHO05D004356 3.8e-138 495.7 347 64.6
A07p28580 Brassica napus HOM05D003764 ORTHO05D004356 4.9e-138 495.4 450 56.0
Hund01762 Selenicereus undatus HOM05D003764 ORTHO05D004356 4.9e-138 495.4 441 56.7
MSTRG.1112 Avicennia marina HOM05D003764 ORTHO05D004356 6.4e-138 495.0 348 66.4
SGA_v2.0_scaffold108G30849 Striga asiatica HOM05D003764 ORTHO05D004356 6.4e-138 495.0 343 66.2
SGA_v2.0_scaffold275G46585 Striga asiatica HOM05D003764 ORTHO05D004356 6.4e-138 495.0 345 66.1
Sed0020753 Sechium edule HOM05D003764 ORTHO05D004356 1.1e-137 494.2 347 65.4
AUR62036887 Chenopodium quinoa HOM05D003764 ORTHO05D004356 2.4e-137 493.0 355 64.8
MELO3C017015.2 Cucumis melo HOM05D003764 ORTHO05D004356 3.2e-137 492.7 442 55.9
Gorai.009G188300 Gossypium raimondii HOM05D003764 ORTHO05D004356 3.2e-137 492.7 439 57.2
Gohir.A05G180000 Gossypium hirsutum HOM05D003764 ORTHO05D004356 4.2e-137 492.3 439 57.4
Psat0s5633g0040 Pisum sativum HOM05D003764 ORTHO05D004356 1.2e-136 490.7 363 62.3
CsaV3_4G037170 Cucumis sativus L. HOM05D003764 ORTHO05D004356 1.6e-136 490.3 436 56.4
MSTRG.25298 Avicennia marina HOM05D003764 ORTHO05D004356 6.0e-136 488.4 456 54.8
SGA_v2.0_scaffold108G30854 Striga asiatica HOM05D003764 ORTHO05D004356 7.9e-136 488.0 343 64.7
SHI08003 Sapria himalayana HOM05D003764 ORTHO05D004356 1.3e-135 487.3 434 56.2
CSS0020809 Camellia sinensis var. sinensis HOM05D003764 ORTHO05D004356 3.9e-135 485.7 410 62.4
EL10Ac1g01980 Beta vulgaris HOM05D003764 ORTHO05D004356 5.6e-134 481.9 369 62.1
Duzib093G1245 Durio zibethinus HOM05D003764 ORTHO05D004356 2.8e-133 479.6 345 65.8
Gohir.D05G183000 Gossypium hirsutum HOM05D003764 ORTHO05D004356 2.8e-133 479.6 439 56.3
Eucgr.F03548 Eucalyptus grandis HOM05D003764 ORTHO05D004356 3.6e-133 479.2 347 63.4
Sc02g0009060 Simmondsia chinensis HOM05D003764 ORTHO05D004356 1.8e-132 476.9 344 64.2
SalBow7G4127 Salvia bowleyana HOM05D003764 ORTHO05D004356 1.5e-131 473.8 483 51.6
Lsat_1_v5_gn_2_6240 Lactuca sativa HOM05D003764 ORTHO05D004356 2.0e-131 473.4 451 53.9
HanXRQChr14g0428241 Helianthus annuus HOM05D003764 ORTHO05D004356 2.9e-130 469.5 342 63.5
SGA_v2.0_scaffold275G46588 Striga asiatica HOM05D003764 ORTHO05D004356 1.8e-127 460.3 329 63.2
Cfa014062 Carpinus fangiana HOM05D003764 ORTHO05D004356 1.1e-126 457.6 459 53.2
Sabra02G0008700 Salix brachista HOM05D003764 ORTHO05D004356 1.6e-125 453.8 428 56.5
THA.LOC104813245 Tarenaya hassleriana HOM05D003764 ORTHO05D004356 3.7e-125 452.6 463 52.7
CDE06G1096 Ceratophyllum demersum HOM05D003764 ORTHO05D004356 4.0e-124 449.1 346 60.1
HanXRQChr15g0491851 Helianthus annuus HOM05D003764 ORTHO05D004356 4.0e-124 449.1 363 58.4
Peaxi162Scf00064g01016 Petunia axillaris HOM05D003764 ORTHO05D004356 5.3e-124 448.7 323 67.8
ATR0106G001 Amborella trichopoda HOM05D003764 ORTHO05D004356 2.6e-123 446.4 349 58.2
unitig_747.g21519 Utricularia gibba HOM05D003764 ORTHO05D004356 3.4e-123 446.0 345 61.2
HPP92_026195 Vanilla planifolia HOM05D003764 ORTHO05D004356 2.2e-122 443.4 350 60.0
Cpa.g.sc26.208 Carica papaya HOM05D003764 ORTHO05D004356 2.7e-120 436.4 287 65.5
SEGI_06086 Sequoiadendron giganteum HOM05D003764 ORTHO05D004356 7.2e-113 411.8 339 55.2
HPP92_022192 Vanilla planifolia HOM05D003764 ORTHO05D004356 9.3e-113 411.4 340 56.8
SEGI_23487 Sequoiadendron giganteum HOM05D003764 ORTHO05D004356 1.6e-112 410.6 340 54.7
HPP92_022186 Vanilla planifolia HOM05D003764 ORTHO05D004356 1.8e-111 407.1 340 56.5
MD15G1002800 Malus domestica HOM05D003764 ORTHO05D004356 5.1e-111 405.6 250 73.2
HPP92_026182 Vanilla planifolia HOM05D003764 ORTHO05D004356 1.3e-109 401.0 299 62.9
TWI12G0241 Tripterygium wilfordii HOM05D003764 ORTHO05D004356 7.9e-104 381.7 253 66.0
DCAR_013910 Daucus carota HOM05D003764 ORTHO05D004356 5.7e-102 375.6 469 46.3
CDE07G0072 Ceratophyllum demersum HOM05D003764 ORTHO05D004356 1.7e-101 374.0 303 58.7
unitig_0.g1266 Utricularia gibba HOM05D003764 ORTHO05D004356 3.6e-96 356.3 338 48.8
unitig_699.g19216 Utricularia gibba HOM05D003764 ORTHO05D004356 6.7e-95 352.1 367 45.8
unitig_747.g21882 Utricularia gibba HOM05D003764 ORTHO05D004356 8.8e-95 351.7 373 46.9
Pp3c14_15070 Physcomitrium patens HOM05D003764 ORTHO05D004356 3.3e-94 349.7 339 50.7
Mapoly0006s0188 Marchantia polymorpha HOM05D003764 ORTHO05D004356 5.7e-94 349.0 340 49.4
Sabra02G0009000 Salix brachista HOM05D003764 ORTHO05D004356 2.2e-93 347.1 238 65.1
Mapoly0049s0068 Marchantia polymorpha HOM05D003764 ORTHO05D004356 2.0e-91 340.5 344 49.7
AagrBONN_evm.TU.Sc2ySwM_228.3221 Anthoceros agrestis HOM05D003764 ORTHO05D004356 2.2e-90 337.0 341 48.7
A09p51670 Brassica napus HOM05D003764 ORTHO05D004356 2.2e-90 337.0 242 62.8
unitig_699.g19217 Utricularia gibba HOM05D003764 ORTHO05D004356 1.6e-88 330.9 367 44.7
Atru.chr13.152 Acer truncatum HOM05D003764 ORTHO05D004356 3.3e-86 323.2 311 55.9
Zm00001eb209300 Zea mays HOM05D003764 ORTHO05D004356 4.1e-84 316.2 381 45.4
HanXRQChr14g0428221 Helianthus annuus HOM05D003764 ORTHO05D004356 5.3e-84 315.8 236 59.3
SMO141G0079 Selaginella moellendorffii HOM05D003764 ORTHO05D004356 7.0e-84 315.5 348 46.6
ECA238G1445 Erigeron canadensis HOM05D003764 ORTHO05D004356 2.9e-82 310.1 236 58.9
SMO364G0266 Selaginella moellendorffii HOM05D003764 ORTHO05D004356 1.8e-76 290.8 350 42.9
AagrBONN_evm.TU.Sc2ySwM_368.3397 Anthoceros agrestis HOM05D003764 ORTHO05D004356 1.6e-75 287.7 320 46.2
Pp3c1_32600 Physcomitrium patens HOM05D003764 ORTHO05D004356 2.7e-75 287.0 344 43.0
Pp3c2_5370 Physcomitrium patens HOM05D003764 ORTHO05D004356 1.0e-74 285.0 344 41.6
Pp3c17_5840 Physcomitrium patens HOM05D003764 ORTHO05D004356 9.5e-73 278.5 347 42.4
Pp3c17_7390 Physcomitrium patens HOM05D003764 ORTHO05D004356 3.0e-71 273.5 343 41.1
SMO147G0236 Selaginella moellendorffii HOM05D003764 ORTHO05D004356 3.0e-71 273.5 341 40.8
unitig_52.g17754 Utricularia gibba HOM05D003764 ORTHO05D004356 2.8e-69 266.9 241 49.4
SMO367G1018 Selaginella moellendorffii HOM05D003764 ORTHO05D004356 2.1e-64 250.8 344 37.2
CBR_g3019 Chara braunii HOM05D003764 ORTHO05D004356 5.6e-57 226.1 369 35.8
Aqoxy6G01618 Aquilegia oxysepala HOM05D003764 ORTHO05D004356 7.1e-44 182.6 149 61.1
CBR_g9154 Chara braunii HOM05D003764 ORTHO05D004356 8.1e-40 169.1 442 29.4
DCAR_010127 Daucus carota HOM05D003764 ORTHO05D004356 8.6e-34 149.1 153 51.0
ATR0756G001 Amborella trichopoda HOM05D003764 ORTHO05D004356 2.4e-20 104.4 133 37.6
Cfa013034 Carpinus fangiana HOM05D003764 ORTHO05D004356 2.4e-20 104.4 81 51.9
SMO170G0013 Selaginella moellendorffii HOM05D003764 ORTHO05D004356 1.9e-17 94.7 119 39.5
Os02g0119600 Oryza sativa ssp. japonica HOM05D003764 ORTHO05D004356 2.1e-16 91.3 76 48.7
Potri.012G136700 Populus trichocarpa HOM05D003764 ORTHO05D004356 1.5e-14 85.1 131 45.8
ATR0276G001 Amborella trichopoda HOM05D003764 ORTHO05D004356 7.6e-14 82.8 100 36.0
ATR0138G019 Amborella trichopoda HOM05D003764 ORTHO05D004356 3.9e-10 70.5 88 43.2
Nn1g01454 Nelumbo nucifera HOM05D003764 ORTHO05D004356 6.2e-08 63.2 36 77.8


User provided reference genes

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