Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO170G5983 Papaver somniferum HOM05D005468 ORTHO05D006789 3.0e-128 461.8 229 100.0
PSO210G2601 Papaver somniferum HOM05D005468 ORTHO05D006789 8.7e-128 460.3 229 99.6
Nn5g29408 Nelumbo nucifera HOM05D005468 ORTHO05D006789 8.4e-115 417.2 229 86.9
Psat5g045200 Pisum sativum HOM05D005468 ORTHO05D006789 8.4e-115 417.2 229 86.9
Ca_15981_v3 Cicer arietinum L. HOM05D005468 ORTHO05D006789 3.2e-114 415.2 229 86.0
Ciclev10002374m.g Citrus clementina HOM05D005468 ORTHO05D006789 3.2e-114 415.2 229 86.9
TAR625G1030 Trochodendron aralioides HOM05D005468 ORTHO05D006789 5.4e-114 414.5 229 88.2
Lalb_Chr23g0266811 Lupinus albus HOM05D005468 ORTHO05D006789 7.1e-114 414.1 229 85.6
GSVIVG01009588001 Vitis vinifera HOM05D005468 ORTHO05D006789 7.1e-114 414.1 229 86.5
Cc10_g03660 Coffea canephora HOM05D005468 ORTHO05D006789 9.3e-114 413.7 227 86.3
TWI56G0523 Tripterygium wilfordii HOM05D005468 ORTHO05D006789 1.2e-113 413.3 229 86.0
TAR381G1584 Trochodendron aralioides HOM05D005468 ORTHO05D006789 1.6e-113 412.9 229 87.3
Manes.18G025300 Manihot esculenta HOM05D005468 ORTHO05D006789 2.7e-113 412.1 227 85.9
Duzib093G1518 Durio zibethinus HOM05D005468 ORTHO05D006789 3.5e-113 411.8 229 86.0
Lj1g0015279 Lotus japonicus HOM05D005468 ORTHO05D006789 3.5e-113 411.8 229 85.2
vmacro21583 Vaccinium macrocarpon HOM05D005468 ORTHO05D006789 3.5e-113 411.8 227 86.3
Cfa018481 Carpinus fangiana HOM05D005468 ORTHO05D006789 4.6e-113 411.4 229 85.2
CiPaw.16G051900 Carya illinoinensis HOM05D005468 ORTHO05D006789 4.6e-113 411.4 227 87.2
Gohir.D05G201600 Gossypium hirsutum HOM05D005468 ORTHO05D006789 4.6e-113 411.4 229 86.0
Gorai.009G207300 Gossypium raimondii HOM05D005468 ORTHO05D006789 4.6e-113 411.4 229 86.0
Medtr3g100940 Medicago truncatula HOM05D005468 ORTHO05D006789 6.0e-113 411.0 229 85.2
Rhsim06G0040800 Rhododendron simsii HOM05D005468 ORTHO05D006789 6.0e-113 411.0 227 85.9
Thecc.08G017100 Theobroma cacao HOM05D005468 ORTHO05D006789 6.0e-113 411.0 229 86.0
Duzib116G0868 Durio zibethinus HOM05D005468 ORTHO05D006789 7.9e-113 410.6 229 85.6
Potri.002G130100 Populus trichocarpa HOM05D005468 ORTHO05D006789 7.9e-113 410.6 227 85.5
RcHm_v2.0_Chr6g0300041 Rosa chinensis HOM05D005468 ORTHO05D006789 7.9e-113 410.6 229 84.3
CiPaw.15G066600 Carya illinoinensis HOM05D005468 ORTHO05D006789 1.8e-112 409.5 227 85.5
Eucgr.F02400 Eucalyptus grandis HOM05D005468 ORTHO05D006789 1.8e-112 409.5 229 84.7
Gohir.A05G198900 Gossypium hirsutum HOM05D005468 ORTHO05D006789 1.8e-112 409.5 229 85.6
FAN27G0003 Fragaria x ananassa HOM05D005468 ORTHO05D006789 3.0e-112 408.7 229 84.3
Phvul.009G061800 Phaseolus vulgaris HOM05D005468 ORTHO05D006789 3.0e-112 408.7 229 84.7
TPR.G26072 Trifolium pratense HOM05D005468 ORTHO05D006789 3.0e-112 408.7 229 85.6
arahy.Tifrunner.gnm1.ann1.P2WCGJ Arachis hypogaea HOM05D005468 ORTHO05D006789 3.9e-112 408.3 229 83.8
arahy.Tifrunner.gnm1.ann1.Y0EE8X Arachis hypogaea HOM05D005468 ORTHO05D006789 3.9e-112 408.3 229 83.8
FvH4_2g40630 Fragaria vesca HOM05D005468 ORTHO05D006789 3.9e-112 408.3 229 84.3
Lalb_Chr08g0245731 Lupinus albus HOM05D005468 ORTHO05D006789 3.9e-112 408.3 229 84.7
Prupe.1G387900 Prunus persica HOM05D005468 ORTHO05D006789 5.1e-112 407.9 229 84.3
Glyma.04G035800 Glycine max HOM05D005468 ORTHO05D006789 6.7e-112 407.5 229 84.7
Potri.014G037100 Populus trichocarpa HOM05D005468 ORTHO05D006789 6.7e-112 407.5 227 84.6
VMungo1309G2021 Vigna mungo HOM05D005468 ORTHO05D006789 6.7e-112 407.5 229 84.7
FAN20G0953 Fragaria x ananassa HOM05D005468 ORTHO05D006789 8.7e-112 407.1 229 83.8
Glyma.06G035800 Glycine max HOM05D005468 ORTHO05D006789 8.7e-112 407.1 229 84.7
PGR031G2816 Punica granatum HOM05D005468 ORTHO05D006789 8.7e-112 407.1 229 84.7
Gorai.010G015600 Gossypium raimondii HOM05D005468 ORTHO05D006789 1.1e-111 406.8 227 84.6
Sc15g0006600 Simmondsia chinensis HOM05D005468 ORTHO05D006789 1.1e-111 406.8 229 83.0
COL.COLO4_26415 Corchorus olitorius HOM05D005468 ORTHO05D006789 1.5e-111 406.4 227 83.7
Gohir.A06G015000 Gossypium hirsutum HOM05D005468 ORTHO05D006789 1.5e-111 406.4 227 85.0
Cpa.g.sc64.18 Carica papaya HOM05D005468 ORTHO05D006789 1.9e-111 406.0 227 83.7
FAN15G3574 Fragaria x ananassa HOM05D005468 ORTHO05D006789 1.9e-111 406.0 229 83.4
SalBow8G4730 Salvia bowleyana HOM05D005468 ORTHO05D006789 2.5e-111 405.6 227 84.6
Hma1.2p1_0260F.1_g104510 Hydrangea macrophylla HOM05D005468 ORTHO05D006789 3.3e-111 405.2 229 84.7
MBI16_g31482_MAGBIO Magnolia biondii HOM05D005468 ORTHO05D006789 3.3e-111 405.2 220 87.7
QL02p006494 Quercus lobata HOM05D005468 ORTHO05D006789 5.6e-111 404.4 227 84.6
Migut.N02685 Erythranthe guttata HOM05D005468 ORTHO05D006789 1.3e-110 403.3 227 84.6
SGA_v2.0_scaffold28G11772 Striga asiatica HOM05D005468 ORTHO05D006789 1.6e-110 402.9 227 84.6
Manes.05G168700 Manihot esculenta HOM05D005468 ORTHO05D006789 2.1e-110 402.5 227 83.7
Os03g0766000 Oryza sativa ssp. japonica HOM05D005468 ORTHO05D006789 3.1e-109 398.7 226 82.7
Sabra02G0102000 Salix brachista HOM05D005468 ORTHO05D006789 3.1e-109 398.7 227 83.7
Zm00001eb058600 Zea mays HOM05D005468 ORTHO05D006789 3.1e-109 398.7 226 82.3
MSTRG.22278 Avicennia marina HOM05D005468 ORTHO05D006789 4.0e-109 398.3 227 83.3
Migut.C00650 Erythranthe guttata HOM05D005468 ORTHO05D006789 6.9e-109 397.5 227 82.8
MD15G1034100 Malus domestica HOM05D005468 ORTHO05D006789 9.0e-109 397.1 227 81.9
Actinidia38034 Actinidia chinensis HOM05D005468 ORTHO05D006789 1.5e-108 396.4 229 81.7
Actinidia29851 Actinidia chinensis HOM05D005468 ORTHO05D006789 2.6e-108 395.6 229 81.2
EL10Ac1g01754 Beta vulgaris HOM05D005468 ORTHO05D006789 3.4e-108 395.2 227 80.6
THA.LOC104803401 Tarenaya hassleriana HOM05D005468 ORTHO05D006789 7.6e-108 394.0 227 81.1
HanXRQChr02g0046441 Helianthus annuus HOM05D005468 ORTHO05D006789 1.3e-107 393.3 229 81.7
THA.LOC104813200 Tarenaya hassleriana HOM05D005468 ORTHO05D006789 1.3e-107 393.3 227 82.4
CAN.G1002.2 Capsicum annuum HOM05D005468 ORTHO05D006789 2.2e-107 392.5 227 81.5
Lsat_1_v5_gn_1_19180 Lactuca sativa HOM05D005468 ORTHO05D006789 2.9e-107 392.1 227 82.4
Aa31sc119G90 Aethionema arabicum HOM05D005468 ORTHO05D006789 8.4e-107 390.6 227 80.2
CANSAT56G1446 Cannabis sativa HOM05D005468 ORTHO05D006789 1.1e-106 390.2 227 81.9
BcaB07g33823 Brassica carinata HOM05D005468 ORTHO05D006789 2.5e-106 389.0 229 81.2
BcaC08g42963 Brassica carinata HOM05D005468 ORTHO05D006789 2.5e-106 389.0 229 81.2
C06p02040 Brassica napus HOM05D005468 ORTHO05D006789 2.5e-106 389.0 229 81.2
BraA10t42894Z Brassica rapa HOM05D005468 ORTHO05D006789 2.5e-106 389.0 229 81.2
Sp1g34660 Schrenkiella parvula HOM05D005468 ORTHO05D006789 2.5e-106 389.0 229 81.2
MSTRG.24315 Avicennia marina HOM05D005468 ORTHO05D006789 5.5e-106 387.9 227 82.4
Thhalv10011754m.g Eutrema salsugineum HOM05D005468 ORTHO05D006789 5.5e-106 387.9 229 80.8
PGSC0003DMG400015450 Solanum tuberosum HOM05D005468 ORTHO05D006789 7.1e-106 387.5 229 81.2
Zm00001eb214040 Zea mays HOM05D005468 ORTHO05D006789 9.3e-106 387.1 227 80.2
AL1G54040 Arabidopsis lyrata HOM05D005468 ORTHO05D006789 1.2e-105 386.7 229 80.3
Sopen12g030860 Solanum pennellii HOM05D005468 ORTHO05D006789 1.6e-105 386.3 229 80.8
MD08G1039400 Malus domestica HOM05D005468 ORTHO05D006789 2.1e-105 386.0 229 80.3
Carub.0001s3642 Capsella rubella HOM05D005468 ORTHO05D006789 4.6e-105 384.8 229 80.3
AT1G47640 Arabidopsis thaliana HOM05D005468 ORTHO05D006789 6.0e-105 384.4 229 80.3
Gohir.D06G013000 Gossypium hirsutum HOM05D005468 ORTHO05D006789 1.8e-104 382.9 227 81.1
BcaC07g37205 Brassica carinata HOM05D005468 ORTHO05D006789 3.9e-104 381.7 229 78.6
A08p05550 Brassica napus HOM05D005468 ORTHO05D006789 5.1e-104 381.3 229 78.6
BolC6t35332H Brassica oleracea HOM05D005468 ORTHO05D006789 5.1e-104 381.3 238 78.2
BolC8t47397H Brassica oleracea HOM05D005468 ORTHO05D006789 6.7e-104 380.9 229 78.6
BraA08t32559Z Brassica rapa HOM05D005468 ORTHO05D006789 1.9e-103 379.4 229 78.2
Dinv36016 Davidia involucrata HOM05D005468 ORTHO05D006789 7.4e-103 377.5 229 80.8
Aqoxy6G00937 Aquilegia oxysepala HOM05D005468 ORTHO05D006789 9.6e-103 377.1 227 80.6
CDE04G3466 Ceratophyllum demersum HOM05D005468 ORTHO05D006789 9.6e-103 377.1 227 78.9
C08p06100 Brassica napus HOM05D005468 ORTHO05D006789 1.3e-102 376.7 229 77.7
A10p06260 Brassica napus HOM05D005468 ORTHO05D006789 6.2e-102 374.4 256 72.7
Nn6g32145 Nelumbo nucifera HOM05D005468 ORTHO05D006789 4.2e-98 361.7 229 77.7
HPP92_019640 Vanilla planifolia HOM05D005468 ORTHO05D006789 1.2e-97 360.1 229 74.2
CsaV3_3G044590 Cucumis sativus L. HOM05D005468 ORTHO05D006789 1.6e-97 359.8 203 84.7
Hund26608 Selenicereus undatus HOM05D005468 ORTHO05D006789 1.8e-96 356.3 202 83.2
Sabra14G0026700 Salix brachista HOM05D005468 ORTHO05D006789 2.3e-96 355.9 202 83.2
Mapoly0136s0007 Marchantia polymorpha HOM05D005468 ORTHO05D006789 2.5e-95 352.4 227 73.6
ECA247G3714 Erigeron canadensis HOM05D005468 ORTHO05D006789 3.3e-95 352.1 204 82.8
Pp3c3_13070 Physcomitrium patens HOM05D005468 ORTHO05D006789 5.7e-95 351.3 227 71.8
SEGI_18559 Sequoiadendron giganteum HOM05D005468 ORTHO05D006789 3.7e-94 348.6 210 77.6
SMO119G0125 Selaginella moellendorffii HOM05D005468 ORTHO05D006789 5.3e-93 344.7 229 71.6
SMO163G0011 Selaginella moellendorffii HOM05D005468 ORTHO05D006789 5.3e-93 344.7 229 71.6
CSS0002701 Camellia sinensis var. sinensis HOM05D005468 ORTHO05D006789 3.4e-92 342.0 185 88.1
Haze_17591 Corylus avellana HOM05D005468 ORTHO05D006789 5.9e-92 341.3 191 85.3
unitig_26.g10028 Utricularia gibba HOM05D005468 ORTHO05D006789 1.3e-91 340.1 199 81.9
Dinv39358 Davidia involucrata HOM05D005468 ORTHO05D006789 6.5e-91 337.8 190 83.7
BcaB04g17508 Brassica carinata HOM05D005468 ORTHO05D006789 8.5e-91 337.4 229 71.2
ATR0733G175 Amborella trichopoda HOM05D005468 ORTHO05D006789 1.1e-90 337.0 192 84.4
Sed0015581 Sechium edule HOM05D005468 ORTHO05D006789 1.6e-89 333.2 233 71.7
Atru.BG.240.p Acer truncatum HOM05D005468 ORTHO05D006789 7.9e-89 330.9 186 84.9
Nitab4.5_0000790g0020 Nicotiana tabacum HOM05D005468 ORTHO05D006789 1.1e-87 327.0 250 66.0
Nitab4.5_0000453g0110 Nicotiana tabacum HOM05D005468 ORTHO05D006789 9.7e-87 323.9 185 82.2
Peaxi162Scf00064g00217 Petunia axillaris HOM05D005468 ORTHO05D006789 1.3e-86 323.6 185 83.2
CBR_g99 Chara braunii HOM05D005468 ORTHO05D006789 8.2e-86 320.9 226 65.9
Oeu028451.1 Olea europaea HOM05D005468 ORTHO05D006789 4.1e-85 318.5 227 70.0
Ah.03g134890 Amaranthus hybridus HOM05D005468 ORTHO05D006789 1.4e-82 310.1 185 78.4
Sed0011570 Sechium edule HOM05D005468 ORTHO05D006789 9.4e-82 307.4 226 65.5
Atru.chr13.591 Acer truncatum HOM05D005468 ORTHO05D006789 2.4e-77 292.7 160 85.6
Lj1C905G11 Lonicera japonica HOM05D001696 ORTHO05D001746 1.1e-74 283.9 164 81.7
AUR62033873 Chenopodium quinoa HOM05D005468 ORTHO05D006789 2.3e-72 276.2 355 45.1
CARHR037270 Cardamine hirsuta HOM05D005468 ORTHO05D006789 8.2e-70 267.7 162 78.4
CARHR054190 Cardamine hirsuta HOM05D005468 ORTHO05D006789 5.7e-63 245.0 162 70.4
AagrBONN_evm.TU.Sc2ySwM_362.508 Anthoceros agrestis HOM05D005468 ORTHO05D006789 6.1e-57 224.9 154 69.5
Migut.O00871 Erythranthe guttata HOM05D005468 ORTHO05D006789 3.7e-54 215.7 120 83.3
CARHR034590 Cardamine hirsuta HOM05D005468 ORTHO05D006789 2.7e-52 209.5 131 74.0
CARHR259240 Cardamine hirsuta HOM05D005468 ORTHO05D006789 9.8e-31 137.9 140 52.1
CARHR037280 Cardamine hirsuta HOM05D005468 ORTHO05D006789 1.7e-27 127.1 69 85.5
arahy.Tifrunner.gnm1.ann1.N94XAP Arachis hypogaea HOM05D005468 ORTHO05D006789 3.2e-21 106.3 62 71.0
Actinidia01618 Actinidia chinensis HOM05D000509 ORTHO05D000466 3.6e-17 92.8 124 46.0
CAN.G371.92 Capsicum annuum HOM05D005468 ORTHO05D006789 8.9e-16 88.2 152 37.5
AUR62040094 Chenopodium quinoa HOM05D000023 ORTHO05D000014 1.7e-14 84.0 45 82.2
arahy.Tifrunner.gnm1.ann1.APL3GL Arachis hypogaea HOM05D005468 ORTHO05D006789 6.4e-14 82.0 81 53.1
Rhsim05G0183600 Rhododendron simsii HOM05D000190 ORTHO05D000113 2.4e-13 80.1 151 36.4
arahy.Tifrunner.gnm1.ann1.R2S7J0 Arachis hypogaea HOM05D005468 ORTHO05D004485 8.7e-11 71.6 64 53.1
MD11G1104700 Malus domestica HOM05D005468 ORTHO05D006789 7.3e-10 68.6 49 65.3
Aa31LG9G12690 Aethionema arabicum HOM05D005468 ORTHO05D006789 6.9e-08 62.0 82 46.3
ClCG05G019450 Citrullus lanatus HOM05D005468 ORTHO05D006789 7.6e-07 58.5 26 96.2


User provided reference genes

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