Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO170G5960 Papaver somniferum HOM05D005772 ORTHO05D006468 6.7e-128 460.7 232 100.0
PSO063G1689 Papaver somniferum HOM05D005772 ORTHO05D006468 9.8e-79 297.4 168 89.9
TAR625G1307 Trochodendron aralioides HOM05D005772 ORTHO05D006468 1.2e-60 237.3 233 58.4
Prupe.3G025100 Prunus persica HOM05D005772 ORTHO05D006468 8.7e-59 231.1 240 55.0
Potri.007G001400 Populus trichocarpa HOM05D005772 ORTHO05D006468 7.3e-58 228.0 233 52.8
Aqoxy2G03016 Aquilegia oxysepala HOM05D005772 ORTHO05D006468 1.2e-57 227.3 242 55.8
TWI18G0423 Tripterygium wilfordii HOM05D005772 ORTHO05D006468 1.2e-57 227.3 235 53.6
CSS0023973 Camellia sinensis var. sinensis HOM05D005772 ORTHO05D006468 3.6e-57 225.7 238 53.8
Sabra07G0001200 Salix brachista HOM05D005772 ORTHO05D006468 8.1e-57 224.6 230 53.0
Cfa003428 Carpinus fangiana HOM05D005772 ORTHO05D006468 5.2e-56 221.9 234 53.0
Nn8g41076 Nelumbo nucifera HOM05D005772 ORTHO05D006468 5.2e-56 221.9 237 53.2
CiPaw.02G128300 Carya illinoinensis HOM05D005772 ORTHO05D006468 7.6e-55 218.0 237 51.9
GSVIVG01029533001 Vitis vinifera HOM05D005956 ORTHO05D007197 7.6e-55 218.0 238 52.9
Ciclev10013938m.g Citrus clementina HOM05D005772 ORTHO05D006468 1.3e-54 217.2 229 54.6
Ciclev10013939m.g Citrus clementina HOM05D005772 ORTHO05D006468 1.3e-54 217.2 229 54.6
MBI06_g27497_MAGBIO Magnolia biondii HOM05D005772 ORTHO05D006468 1.3e-54 217.2 235 54.9
MD04G1024200 Malus domestica HOM05D005772 ORTHO05D006468 1.7e-54 216.9 240 50.0
QL06p046996 Quercus lobata HOM05D005772 ORTHO05D006468 1.9e-53 213.4 236 52.1
RcHm_v2.0_Chr2g0149081 Rosa chinensis HOM05D005772 ORTHO05D006468 2.7e-52 209.5 242 50.4
FAN09G4514 Fragaria x ananassa HOM05D005772 ORTHO05D006468 1.0e-51 207.6 242 50.8
CiPaw.01G207400 Carya illinoinensis HOM05D005772 ORTHO05D006468 1.3e-51 207.2 236 51.7
FAN02G1413 Fragaria x ananassa HOM05D005772 ORTHO05D006468 2.3e-51 206.5 242 50.4
FAN14G5951 Fragaria x ananassa HOM05D005772 ORTHO05D006468 2.5e-50 203.0 242 49.6
Ciclev10013941m.g Citrus clementina HOM05D005772 ORTHO05D006468 7.3e-50 201.4 229 52.8
CSS0004874 Camellia sinensis var. sinensis HOM05D005772 ORTHO05D006468 4.8e-49 198.7 237 50.2
Manes.14G007000 Manihot esculenta HOM05D005772 ORTHO05D006468 1.4e-48 197.2 228 46.5
Thecc.06G054300 Theobroma cacao HOM05D005772 ORTHO05D006468 1.2e-47 194.1 233 48.5
Lj3g0026748 Lotus japonicus HOM05D005772 ORTHO05D006468 4.5e-47 192.2 238 50.8
vmacro10401 Vaccinium macrocarpon HOM05D005772 ORTHO05D006468 9.9e-47 191.0 239 46.4
PGR031G3661 Punica granatum HOM05D005772 ORTHO05D006468 4.9e-46 188.7 240 47.1
Rhsim08G0251400 Rhododendron simsii HOM05D000927 ORTHO05D000850 3.0e-43 179.5 141 63.1
HPP92_009982 Vanilla planifolia HOM05D005772 ORTHO05D006468 6.7e-43 178.3 208 49.0
CANSAT01G3073 Cannabis sativa HOM05D005772 ORTHO05D006468 1.5e-42 177.2 245 45.7
Potri.007G001650 Populus trichocarpa HOM05D005772 ORTHO05D006468 1.1e-40 171.0 123 64.2
Oeu038376.1 Olea europaea HOM05D005772 ORTHO05D006468 3.4e-39 166.0 170 51.2
Medtr0032s0080 Medicago truncatula HOM05D005772 ORTHO05D006468 5.1e-35 152.1 236 41.5
Aa31LG4G2060 Aethionema arabicum HOM05D005772 ORTHO05D006468 1.3e-33 147.5 228 39.9
SHI31127 Sapria himalayana HOM05D005772 ORTHO05D006468 4.8e-33 145.6 307 35.8
CARHR072530 Cardamine hirsuta HOM05D005772 ORTHO05D006468 1.4e-32 144.1 216 40.7
BraA07t30382Z Brassica rapa HOM05D005772 ORTHO05D006468 3.2e-29 132.9 215 40.0
THA.LOC104813627 Tarenaya hassleriana HOM05D005772 ORTHO05D006468 3.2e-29 132.9 270 38.5
BcaB02g07187 Brassica carinata HOM05D005772 ORTHO05D006468 4.2e-29 132.5 214 39.7
A07p27410 Brassica napus HOM05D005772 ORTHO05D006468 9.3e-29 131.3 219 38.8
BcaC08g45402 Brassica carinata HOM05D007236 ORTHO05D009150 1.2e-28 131.0 138 54.3
AT1G78922 Arabidopsis thaliana HOM05D005772 ORTHO05D006468 3.5e-28 129.4 211 42.7
Carub.0002s2577 Capsella rubella HOM05D005772 ORTHO05D006468 3.5e-28 129.4 229 38.0
FvH4_6g36610 Fragaria vesca HOM05D005772 ORTHO05D006468 1.8e-27 127.1 178 45.5
C06p30330 Brassica napus HOM05D005772 ORTHO05D006468 2.3e-27 126.7 216 40.7
BolC6t38196H Brassica oleracea HOM05D005772 ORTHO05D006468 2.3e-27 126.7 216 40.7
AL2G39360 Arabidopsis lyrata HOM05D005772 ORTHO05D006468 7.4e-26 121.7 106 56.6
TPR.G38724 Trifolium pratense HOM05D003324 ORTHO05D006468 4.8e-25 119.0 141 51.8
Haze_16205 Corylus avellana HOM05D005772 ORTHO05D006468 8.2e-25 118.2 188 41.5
Sp5g33960 Schrenkiella parvula HOM05D005772 ORTHO05D006468 1.4e-24 117.5 224 39.7
Migut.C01111 Erythranthe guttata HOM05D005772 ORTHO05D006468 2.4e-24 116.7 235 35.7
Actinidia15231 Actinidia chinensis HOM05D005772 ORTHO05D006468 2.6e-23 113.2 229 34.9
VMungo1309G2764 Vigna mungo HOM05D005772 ORTHO05D006468 1.0e-22 111.3 189 39.2
TAR628G1655 Trochodendron aralioides HOM05D005772 ORTHO05D006468 1.7e-22 110.5 202 37.6
MBI06_g44579_MAGBIO Magnolia biondii HOM05D005772 ORTHO05D006468 2.2e-22 110.2 142 38.7
Migut.E01717 Erythranthe guttata HOM05D005772 ORTHO05D006468 2.9e-22 109.8 236 35.6
Migut.E00857 Erythranthe guttata HOM05D005772 ORTHO05D006468 5.0e-22 109.0 236 35.6
Phvul.009G125600 Phaseolus vulgaris HOM05D005772 ORTHO05D006468 5.0e-22 109.0 185 40.5
Nn5g28367 Nelumbo nucifera HOM05D005772 ORTHO05D006468 1.1e-21 107.8 225 33.3
Dinv20324 Davidia involucrata HOM05D005772 ORTHO05D006468 1.4e-21 107.5 239 38.5
Phvul.007G102200 Phaseolus vulgaris HOM05D005772 ORTHO05D006468 1.4e-21 107.5 202 39.6
arahy.Tifrunner.gnm1.ann1.B1JKF4 Arachis hypogaea HOM05D005772 ORTHO05D006468 2.5e-21 106.7 161 44.1
Atru.chr1.2602 Acer truncatum HOM05D005772 ORTHO05D006468 4.2e-21 105.9 158 43.7
QL09p033796 Quercus lobata HOM05D005772 ORTHO05D006468 4.2e-21 105.9 136 40.4
Gohir.A05G237000 Gossypium hirsutum HOM05D005772 ORTHO05D006468 7.2e-21 105.1 124 46.0
ClCG11G015880 Citrullus lanatus HOM05D005772 ORTHO05D006468 2.1e-20 103.6 141 41.1
SGA_v2.0_scaffold52G18944 Striga asiatica HOM05D005772 ORTHO05D006468 3.6e-20 102.8 242 33.1
Gohir.D05G239100 Gossypium hirsutum HOM05D005772 ORTHO05D006468 6.1e-20 102.1 126 44.4
Hma1.2p1_0612F.1_g188830 Hydrangea macrophylla HOM05D005772 ORTHO05D006468 7.9e-20 101.7 222 32.9
Gorai.009G247900 Gossypium raimondii HOM05D005772 ORTHO05D006468 1.0e-19 101.3 124 44.4
Psat5g087080 Pisum sativum HOM05D005772 ORTHO05D006468 1.4e-19 100.9 248 32.3
Glyma.06G113802 Glycine max HOM05D005772 ORTHO05D006468 1.8e-19 100.5 118 45.8
arahy.Tifrunner.gnm1.ann1.AWF3QX Arachis hypogaea HOM05D005772 ORTHO05D006468 3.0e-19 99.8 211 37.0
Ciclev10003748m.g Citrus clementina HOM05D005772 ORTHO05D006468 3.0e-19 99.8 223 36.3
Duzib093G1216 Durio zibethinus HOM05D005772 ORTHO05D006468 3.0e-19 99.8 137 41.6
CiPaw.16G025800 Carya illinoinensis HOM05D005772 ORTHO05D006468 5.1e-19 99.0 166 34.9
Thecc.08G129200 Theobroma cacao HOM05D005772 ORTHO05D006468 5.1e-19 99.0 202 35.1
Nitab4.5_0000111g0180 Nicotiana tabacum HOM05D005772 ORTHO05D006468 6.7e-19 98.6 164 39.6
TPR.G21059 Trifolium pratense HOM05D005772 ORTHO05D006468 6.7e-19 98.6 199 34.2
Duzib192G0394 Durio zibethinus HOM05D005772 ORTHO05D006468 8.8e-19 98.2 166 41.0
FvH4_4g20570 Fragaria vesca HOM05D005956 ORTHO05D006468 8.8e-19 98.2 155 43.9
Glyma.04G249200 Glycine max HOM05D005772 ORTHO05D006468 8.8e-19 98.2 251 31.5
GSVIVG01008837001 Vitis vinifera HOM05D005772 ORTHO05D006468 8.8e-19 98.2 173 39.3
CANSAT64G1440 Cannabis sativa HOM05D005772 ORTHO05D006468 1.9e-18 97.1 171 36.8
Actinidia21305 Actinidia chinensis HOM05D005772 ORTHO05D006468 3.3e-18 96.3 217 33.6
Cpa.g.sc64.117 Carica papaya HOM05D005772 ORTHO05D006468 4.3e-18 95.9 233 34.8
MELO3C010502.2 Cucumis melo HOM05D005772 ORTHO05D006468 7.4e-18 95.1 244 33.2
Eucgr.A00749 Eucalyptus grandis HOM05D005772 ORTHO05D006468 2.2e-17 93.6 167 42.5
Lalb_Chr08g0241421 Lupinus albus HOM05D005772 ORTHO05D006468 6.3e-17 92.0 247 31.2
Lj1g0001548 Lotus japonicus HOM05D005772 ORTHO05D006468 8.2e-17 91.7 250 31.2
Zm00001eb215960 Zea mays HOM05D046982 ORTHO05D006468 1.8e-16 90.5 201 31.8
CsaV3_4G028090 Cucumis sativus L. HOM05D005772 ORTHO05D006468 4.1e-16 89.4 249 32.1
QL06p047014 Quercus lobata HOM05D001071 ORTHO05D006468 1.2e-15 87.8 136 45.6
Manes.02G166200 Manihot esculenta HOM05D005772 ORTHO05D006468 1.5e-15 87.4 165 34.5
Potri.005G180400 Populus trichocarpa HOM05D005772 ORTHO05D006468 1.7e-14 84.0 170 34.7
SGA_v2.0_scaffold52G18951 Striga asiatica HOM05D005772 ORTHO05D006468 1.7e-14 84.0 212 32.5
Cc10_g12210 Coffea canephora HOM05D005772 ORTHO05D006468 2.9e-14 83.2 107 36.4
Aqoxy6G00258 Aquilegia oxysepala HOM05D005772 ORTHO05D006468 3.8e-14 82.8 146 36.3
DCAR_003562 Daucus carota HOM05D005772 ORTHO05D006468 1.9e-13 80.5 248 31.5
Dinv27285 Davidia involucrata HOM05D005772 ORTHO05D006468 1.9e-13 80.5 232 28.0
PGR042G3290 Punica granatum HOM05D005772 ORTHO05D006468 2.5e-13 80.1 230 29.1
THA.LOC104800210 Tarenaya hassleriana HOM05D005772 ORTHO05D006468 3.2e-13 79.7 189 31.7
AL1G34900 Arabidopsis lyrata HOM05D005772 ORTHO05D006468 5.5e-13 79.0 124 36.3
CSS0028957 Camellia sinensis var. sinensis HOM05D005772 ORTHO05D006468 5.5e-13 79.0 193 32.6
Lj4A634T17 Lonicera japonica HOM05D005772 ORTHO05D006468 5.5e-13 79.0 168 32.7
Carub.0001s2117 Capsella rubella HOM05D005772 ORTHO05D006468 1.2e-12 77.8 125 35.2
CARHR022100 Cardamine hirsuta HOM05D005772 ORTHO05D006468 1.6e-12 77.4 124 35.5
MD04G1024400 Malus domestica HOM05D005772 ORTHO05D006468 1.6e-12 77.4 106 48.1
Oeu009481.1 Olea europaea HOM05D005772 ORTHO05D006468 2.3e-11 73.6 82 42.7
AT1G21722 Arabidopsis thaliana HOM05D005772 ORTHO05D006468 3.9e-11 72.8 124 34.7
MSTRG.1426 Avicennia marina HOM05D005772 ORTHO05D006468 3.9e-11 72.8 196 29.6
Thhalv10008678m.g Eutrema salsugineum HOM05D005772 ORTHO05D006468 3.9e-11 72.8 221 29.9
SGA_v2.0_scaffold24G10436 Striga asiatica HOM05D002121 ORTHO05D004000 1.5e-10 70.9 131 37.4
Aa31LG7G5690 Aethionema arabicum HOM05D002121 ORTHO05D004000 1.7e-09 67.4 92 37.0
Nitab4.5_0004208g0030 Nicotiana tabacum HOM05D005772 ORTHO05D006468 4.8e-09 65.9 226 25.2
A06p17810 Brassica napus HOM05D005772 ORTHO05D006468 7.0e-08 62.0 108 27.8
ATR0709G081 Amborella trichopoda HOM05D005772 ORTHO05D006468 1.2e-07 61.2 82 43.9
CDE05G0489 Ceratophyllum demersum HOM05D007202 ORTHO05D009125 1.5e-07 60.8 128 39.8
Solyc11g017475.1 Solanum lycopersicum HOM05D005772 ORTHO05D006468 2.0e-07 60.5 233 28.8
BcaC05g26092 Brassica carinata HOM05D005772 ORTHO05D006468 1.0e-06 58.2 219 25.1
QL10p063736 Quercus lobata HOM05D001309 ORTHO05D022844 5.0e-06 55.8 33 81.8
QL10p063927 Quercus lobata HOM05D000344 ORTHO05D022844 5.0e-06 55.8 33 81.8
SGA_v2.0_scaffold2751G54198 Striga asiatica HOM05D005772 ORTHO05D006468 8.5e-06 55.1 117 38.5


User provided reference genes

Program Settings