Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO170G5706 Papaver somniferum HOM05D007193 ORTHO05D008972 1.0e-116 423.3 202 100.0
PSO017G7058 Papaver somniferum HOM05D007193 ORTHO05D008972 3.6e-77 292.0 194 74.7
Aqoxy4G02155 Aquilegia oxysepala HOM05D007193 ORTHO05D008972 3.3e-46 189.1 187 52.9
TAR633G0507 Trochodendron aralioides HOM05D007193 ORTHO05D008972 3.1e-44 182.6 185 52.4
Nn2g11074 Nelumbo nucifera HOM05D007193 ORTHO05D008972 1.6e-40 170.2 186 49.5
GSVIVG01030223001 Vitis vinifera HOM05D007193 ORTHO05D008972 2.5e-38 162.9 192 45.3
Prupe.4G286300 Prunus persica HOM05D007193 ORTHO05D008972 1.6e-37 160.2 189 46.0
Dinv11397 Davidia involucrata HOM05D007193 ORTHO05D008972 2.8e-37 159.5 192 49.0
Potri.016G132500 Populus trichocarpa HOM05D007193 ORTHO05D008972 2.8e-37 159.5 189 47.6
Haze_21127 Corylus avellana HOM05D007193 ORTHO05D008972 6.2e-37 158.3 188 47.3
Cfa017069 Carpinus fangiana HOM05D007193 ORTHO05D008972 1.4e-36 157.1 189 48.7
CiPaw.09G217600 Carya illinoinensis HOM05D007193 ORTHO05D008972 1.8e-36 156.8 193 45.6
Rhsim04G0123100 Rhododendron simsii HOM05D007193 ORTHO05D008972 1.8e-36 156.8 192 45.8
Prupe.6G289100 Prunus persica HOM05D007193 ORTHO05D008972 5.3e-36 155.2 188 44.1
Cc02_g36290 Coffea canephora HOM05D007193 ORTHO05D008972 6.9e-36 154.8 195 45.1
Duzib151G0002 Durio zibethinus HOM05D007193 ORTHO05D008972 1.7e-34 150.2 186 48.9
QL07p033223 Quercus lobata HOM05D007193 ORTHO05D008972 2.9e-34 149.4 192 44.3
Hma1.2p1_0174F.1_g077020 Hydrangea macrophylla HOM05D007193 ORTHO05D008972 3.8e-34 149.1 195 43.6
Sabra04G0150400 Salix brachista HOM05D007193 ORTHO05D008972 8.4e-34 147.9 179 46.4
MD12G1184300 Malus domestica HOM05D007193 ORTHO05D008972 1.4e-33 147.1 193 45.6
MBI14_g13641_MAGBIO Magnolia biondii HOM05D007193 ORTHO05D008972 2.4e-33 146.4 195 42.1
Manes.09G115100 Manihot esculenta HOM05D007193 ORTHO05D008972 3.2e-33 146.0 194 42.8
MD04G1170300 Malus domestica HOM05D007193 ORTHO05D008972 4.2e-33 145.6 202 42.6
COL.COLO4_36102 Corchorus olitorius HOM05D007193 ORTHO05D008972 5.4e-33 145.2 186 46.8
Duzib212G0445 Durio zibethinus HOM05D007193 ORTHO05D008972 9.3e-33 144.4 192 45.3
CSS0011076 Camellia sinensis var. sinensis HOM05D007193 ORTHO05D008972 1.2e-32 144.1 197 42.1
CSS0034035 Camellia sinensis var. sinensis HOM05D007193 ORTHO05D008972 1.2e-32 144.1 197 42.1
Nitab4.5_0012389g0010 Nicotiana tabacum HOM05D007193 ORTHO05D008972 1.2e-32 144.1 186 43.0
Nitab4.5_0000454g0040 Nicotiana tabacum HOM05D007193 ORTHO05D008972 4.6e-32 142.1 186 43.0
Peaxi162Scf00732g00443 Petunia axillaris HOM05D007193 ORTHO05D008972 1.3e-31 140.6 186 41.9
TWI53G1230 Tripterygium wilfordii HOM05D007193 ORTHO05D008972 2.3e-31 139.8 195 42.1
Eucgr.A00654 Eucalyptus grandis HOM05D007193 ORTHO05D008972 3.9e-31 139.0 189 42.3
TPR.G30994 Trifolium pratense HOM05D007193 ORTHO05D008972 3.9e-31 139.0 194 41.2
arahy.Tifrunner.gnm1.ann1.Y4LGN2 Arachis hypogaea HOM05D007193 ORTHO05D008972 5.1e-31 138.7 190 42.1
Sopen09g011740 Solanum pennellii HOM05D007193 ORTHO05D008972 8.7e-31 137.9 187 41.7
Ciclev10011631m.g Citrus clementina HOM05D007193 ORTHO05D008972 1.1e-30 137.5 190 43.2
Gohir.A02G005200 Gossypium hirsutum HOM05D007193 ORTHO05D008972 1.1e-30 137.5 193 42.5
Gorai.005G006400 Gossypium raimondii HOM05D007193 ORTHO05D008972 1.1e-30 137.5 193 42.0
PGR031G3803 Punica granatum HOM05D007193 ORTHO05D008972 1.1e-30 137.5 192 38.5
arahy.Tifrunner.gnm1.ann1.N3F1SH Arachis hypogaea HOM05D007193 ORTHO05D008972 1.5e-30 137.1 189 41.8
Psat3g122120 Pisum sativum HOM05D007193 ORTHO05D008972 2.5e-30 136.3 187 41.7
PGSC0003DMG400017034 Solanum tuberosum HOM05D007193 ORTHO05D008972 3.3e-30 136.0 187 42.8
Glyma.19G111900 Glycine max HOM05D007193 ORTHO05D008972 4.3e-30 135.6 187 42.2
Phvul.008G087300 Phaseolus vulgaris HOM05D007193 ORTHO05D008972 4.3e-30 135.6 194 40.7
Solyc09g018490.4 Solanum lycopersicum HOM05D007193 ORTHO05D008972 5.6e-30 135.2 187 40.6
Glyma.09G278200 Glycine max HOM05D007193 ORTHO05D008972 9.6e-30 134.4 189 41.8
Medtr7g072460 Medicago truncatula HOM05D007193 ORTHO05D008972 1.3e-29 134.0 186 41.4
Oeu057644.3 Olea europaea HOM05D007193 ORTHO05D008972 1.3e-29 134.0 185 40.0
CAN.G475.6 Capsicum annuum HOM05D007193 ORTHO05D008972 1.6e-29 133.7 186 41.4
RcHm_v2.0_Chr3g0461371 Rosa chinensis HOM05D007193 ORTHO05D008972 6.2e-29 131.7 193 42.0
VMungo1383G2109 Vigna mungo HOM05D007193 ORTHO05D008972 6.2e-29 131.7 195 39.5
Gohir.A09G213630 Gossypium hirsutum HOM05D007193 ORTHO05D008972 8.1e-29 131.3 188 41.0
Gorai.006G233700 Gossypium raimondii HOM05D007193 ORTHO05D008972 1.4e-28 130.6 189 41.8
ClCG10G022600 Citrullus lanatus HOM05D007193 ORTHO05D008972 3.1e-28 129.4 193 40.9
FvH4_6g10470 Fragaria vesca HOM05D007193 ORTHO05D008972 3.1e-28 129.4 188 41.0
FAN14G4175 Fragaria x ananassa HOM05D007193 ORTHO05D008972 3.1e-28 129.4 188 41.0
Glyma.18G210600 Glycine max HOM05D007193 ORTHO05D008972 3.1e-28 129.4 187 41.2
Lalb_Chr01g0023631 Lupinus albus HOM05D007193 ORTHO05D008972 4.0e-28 129.0 182 41.2
CANSAT35G0173 Cannabis sativa HOM05D007193 ORTHO05D008972 6.9e-28 128.3 204 43.6
FAN05G1003 Fragaria x ananassa HOM05D007193 ORTHO05D008972 6.9e-28 128.3 188 41.0
CAN.G940.17 Capsicum annuum HOM05D007193 ORTHO05D008972 1.2e-27 127.5 186 40.3
FAN02G2621 Fragaria x ananassa HOM05D007193 ORTHO05D008972 1.2e-27 127.5 188 40.4
Atru.chr8.2367 Acer truncatum HOM05D007193 ORTHO05D008972 2.6e-27 126.3 179 42.5
AUR62006334 Chenopodium quinoa HOM05D007193 ORTHO05D008972 3.4e-27 125.9 192 37.5
THA.LOC104806626 Tarenaya hassleriana HOM05D007193 ORTHO05D008972 3.4e-27 125.9 190 40.5
Migut.J00070 Erythranthe guttata HOM05D007193 ORTHO05D008972 5.8e-27 125.2 193 40.4
Gohir.D09G213500 Gossypium hirsutum HOM05D007193 ORTHO05D008972 7.6e-27 124.8 177 42.4
EL10Ac7g17043 Beta vulgaris HOM05D007193 ORTHO05D008972 2.2e-26 123.2 192 37.0
Hund03753 Selenicereus undatus HOM05D007193 ORTHO05D008972 2.2e-26 123.2 190 38.9
MELO3C009116.2 Cucumis melo HOM05D007193 ORTHO05D008972 3.8e-26 122.5 189 41.8
DCAR_028906 Daucus carota HOM05D007193 ORTHO05D008972 4.9e-26 122.1 195 37.9
FAN09G4509 Fragaria x ananassa HOM05D007193 ORTHO05D008972 4.9e-26 122.1 179 39.7
Lj2A63T42 Lonicera japonica HOM05D007193 ORTHO05D008972 1.1e-25 120.9 172 41.3
Lj1g0001931 Lotus japonicus HOM05D007193 ORTHO05D008972 1.1e-25 120.9 195 36.9
Sed0019502 Sechium edule HOM05D007193 ORTHO05D008972 1.1e-25 120.9 185 40.5
CsaV3_3G033230 Cucumis sativus L. HOM05D007193 ORTHO05D008972 1.9e-25 120.2 195 40.5
SGA_v2.0_scaffold85G26656 Striga asiatica HOM05D007193 ORTHO05D008972 4.6e-24 115.5 188 37.8
Ah.08g209780 Amaranthus hybridus HOM05D007193 ORTHO05D008972 1.0e-23 114.4 198 32.8
CARHR161320 Cardamine hirsuta HOM05D007193 ORTHO05D008972 1.0e-23 114.4 186 38.2
AL5G32160 Arabidopsis lyrata HOM05D007193 ORTHO05D008972 8.7e-23 111.3 187 37.4
BcaC06g33003 Brassica carinata HOM05D007193 ORTHO05D008972 1.1e-22 110.9 181 35.9
vmacro08932 Vaccinium macrocarpon HOM05D007193 ORTHO05D008972 1.5e-22 110.5 191 37.2
Aa31sc223G10 Aethionema arabicum HOM05D007193 ORTHO05D008972 3.3e-22 109.4 188 35.1
Ca_07743_v3 Cicer arietinum L. HOM05D007193 ORTHO05D008972 9.6e-22 107.8 154 42.2
AT3G51710 Arabidopsis thaliana HOM05D007193 ORTHO05D008972 8.1e-21 104.8 181 35.4
Carub.0005s1805 Capsella rubella HOM05D007193 ORTHO05D008972 1.4e-20 104.0 182 35.7
Sp5g10570 Schrenkiella parvula HOM05D007193 ORTHO05D008972 1.8e-20 103.6 185 34.6
A03p48460 Brassica napus HOM05D007193 ORTHO05D008972 2.0e-19 100.1 178 34.8
BraA03t13951Z Brassica rapa HOM05D007193 ORTHO05D008972 2.0e-19 100.1 178 34.8
BcaC06g33345 Brassica carinata HOM05D007193 ORTHO05D008972 2.2e-18 96.7 176 34.1
C07p46550 Brassica napus HOM05D007193 ORTHO05D008972 2.2e-18 96.7 176 34.1
Actinidia32557 Actinidia chinensis HOM05D007193 ORTHO05D008972 4.9e-18 95.5 195 34.9
Cpa.g.sc33.101 Carica papaya HOM05D007193 ORTHO05D008972 7.1e-17 91.7 129 39.5
THA.LOC104806964 Tarenaya hassleriana HOM05D007193 ORTHO05D008972 9.3e-17 91.3 122 40.2
AUR62026371 Chenopodium quinoa HOM05D007193 ORTHO05D008972 1.2e-16 90.9 154 34.4
Sc02g0000780 Simmondsia chinensis HOM05D007193 ORTHO05D008972 2.7e-16 89.7 135 39.3
Gohir.D02G005600 Gossypium hirsutum HOM05D007193 ORTHO05D008972 2.3e-15 86.7 138 38.4
Lsat_1_v5_gn_9_38080 Lactuca sativa HOM05D007193 ORTHO05D008972 2.3e-15 86.7 187 33.2
HanXRQChr10g0286401 Helianthus annuus HOM05D007193 ORTHO05D008972 9.6e-14 81.3 190 29.5
Thhalv10010348m.g Eutrema salsugineum HOM05D007193 ORTHO05D008972 2.4e-12 76.6 170 31.8
Aa31LG1G21530 Aethionema arabicum HOM05D007359 ORTHO05D008988 7.4e-06 55.1 181 24.9


User provided reference genes

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