Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO170G5688 Papaver somniferum HOM05D004801 ORTHO05D005747 1.5e-138 496.5 320 100.0
PSO357G0555 Papaver somniferum HOM05D004801 ORTHO05D005747 3.2e-120 435.6 326 85.3
HPP92_008364 Vanilla planifolia HOM05D004801 ORTHO05D005747 1.3e-25 121.3 105 60.0
COL.COLO4_30200 Corchorus olitorius HOM05D004801 ORTHO05D005747 3.9e-25 119.8 88 67.0
Gohir.A04G103500 Gossypium hirsutum HOM05D004801 ORTHO05D005747 3.9e-25 119.8 104 60.6
Gorai.012G128300 Gossypium raimondii HOM05D004801 ORTHO05D005747 3.9e-25 119.8 106 59.4
Potri.013G130700 Populus trichocarpa HOM05D004801 ORTHO05D005747 5.1e-25 119.4 94 63.8
Sed0013547 Sechium edule HOM05D004801 ORTHO05D005747 8.6e-25 118.6 113 59.3
Duzib248G0607 Durio zibethinus HOM05D004801 ORTHO05D005747 1.1e-24 118.2 90 64.4
CAN.G578.5 Capsicum annuum HOM05D004801 ORTHO05D005747 1.5e-24 117.9 94 64.9
Thecc.02G180400 Theobroma cacao HOM05D004801 ORTHO05D005747 1.5e-24 117.9 86 66.3
Gohir.D04G142900 Gossypium hirsutum HOM05D004801 ORTHO05D005747 1.9e-24 117.5 106 58.5
CsaV3_7G004470 Cucumis sativus L. HOM05D004801 ORTHO05D005747 3.3e-24 116.7 116 57.8
Lj3g0028176 Lotus japonicus HOM05D004801 ORTHO05D005747 4.3e-24 116.3 208 40.9
Gohir.A03G156300 Gossypium hirsutum HOM05D004801 ORTHO05D005747 5.6e-24 115.9 88 64.8
Haze_13169 Corylus avellana HOM05D004801 ORTHO05D005747 9.5e-24 115.2 118 54.2
Glyma.13G296700 Glycine max HOM05D004801 ORTHO05D005747 9.5e-24 115.2 86 66.3
Nitab4.5_0000585g0130 Nicotiana tabacum HOM05D004801 ORTHO05D005747 9.5e-24 115.2 86 64.0
Cc05_g07190 Coffea canephora HOM05D004801 ORTHO05D005747 1.2e-23 114.8 109 58.7
ECA234G0944 Erigeron canadensis HOM05D004801 ORTHO05D005747 1.2e-23 114.8 90 64.4
Nitab4.5_0011784g0010 Nicotiana tabacum HOM05D004801 ORTHO05D005747 1.2e-23 114.8 98 61.2
EL10Ac9g20770 Beta vulgaris HOM05D004801 ORTHO05D005747 1.6e-23 114.4 106 57.5
Phvul.004G108100 Phaseolus vulgaris HOM05D004801 ORTHO05D005747 1.6e-23 114.4 86 66.3
VMungo0464G1438 Vigna mungo HOM05D004801 ORTHO05D005747 1.6e-23 114.4 86 65.1
Ah.08g215280 Amaranthus hybridus HOM05D004801 ORTHO05D005747 2.1e-23 114.0 203 40.4
MELO3C018732.2 Cucumis melo HOM05D004801 ORTHO05D005747 2.1e-23 114.0 116 58.6
Glyma.12G204600 Glycine max HOM05D004801 ORTHO05D005747 2.1e-23 114.0 86 65.1
Gohir.D02G179400 Gossypium hirsutum HOM05D004801 ORTHO05D005747 2.1e-23 114.0 86 64.0
Sed0002865 Sechium edule HOM05D004801 ORTHO05D005747 2.1e-23 114.0 100 61.0
QL08p038965 Quercus lobata HOM05D004801 ORTHO05D005747 2.8e-23 113.6 100 58.0
Sabra13G0110300 Salix brachista HOM05D004801 ORTHO05D005747 2.8e-23 113.6 106 57.5
TAR626G1782 Trochodendron aralioides HOM05D004801 ORTHO05D005747 2.8e-23 113.6 328 32.9
vmacro12308 Vaccinium macrocarpon HOM05D004801 ORTHO05D005747 2.8e-23 113.6 88 64.8
CiPaw.03G177800 Carya illinoinensis HOM05D004801 ORTHO05D005747 3.6e-23 113.2 109 56.0
PGR042G3918 Punica granatum HOM05D004801 ORTHO05D005747 3.6e-23 113.2 88 63.6
Rhsim06G0141800 Rhododendron simsii HOM05D004801 ORTHO05D005747 3.6e-23 113.2 88 64.8
Cfa014619 Carpinus fangiana HOM05D004801 ORTHO05D005747 4.7e-23 112.8 118 53.4
Gorai.005G201200 Gossypium raimondii HOM05D004801 ORTHO05D005747 4.7e-23 112.8 113 54.9
Hma1.2p1_0002F.1_g001940 Hydrangea macrophylla HOM05D004801 ORTHO05D005747 4.7e-23 112.8 90 64.4
Sopen10g004180 Solanum pennellii HOM05D004801 ORTHO05D005747 4.7e-23 112.8 195 41.5
PGSC0003DMG400013144 Solanum tuberosum HOM05D004801 ORTHO05D005747 4.7e-23 112.8 118 55.9
Atru.chr6.2990 Acer truncatum HOM05D004801 ORTHO05D005747 8.1e-23 112.1 97 57.7
Lsat_1_v5_gn_8_135921 Lactuca sativa HOM05D004801 ORTHO05D005747 8.1e-23 112.1 103 60.2
ClCG00G003550 Citrullus lanatus HOM05D004801 ORTHO05D005747 1.1e-22 111.7 109 58.7
ClCG07G002870 Citrullus lanatus HOM05D004801 ORTHO05D005747 1.1e-22 111.7 109 58.7
Sc21g0002890 Simmondsia chinensis HOM05D004801 ORTHO05D005747 1.1e-22 111.7 98 59.2
Ca_01496_v3 Cicer arietinum L. HOM05D004801 ORTHO05D005747 1.4e-22 111.3 108 57.4
TWI36G1772 Tripterygium wilfordii HOM05D004801 ORTHO05D005747 1.4e-22 111.3 111 56.8
Oeu019133.1 Olea europaea HOM05D004801 ORTHO05D005747 1.8e-22 110.9 94 63.8
SHI10398 Sapria himalayana HOM05D004801 ORTHO05D005747 2.4e-22 110.5 90 62.2
Ciclev10016785m.g Citrus clementina HOM05D004801 ORTHO05D005747 4.0e-22 109.8 84 64.3
Peaxi162Scf00059g00194 Petunia axillaris HOM05D004801 ORTHO05D005747 4.0e-22 109.8 86 65.1
MSTRG.14326 Avicennia marina HOM05D004801 ORTHO05D005747 5.2e-22 109.4 117 53.0
Migut.M00296 Erythranthe guttata HOM05D004801 ORTHO05D005747 5.2e-22 109.4 121 51.2
Eucgr.A01822 Eucalyptus grandis HOM05D004801 ORTHO05D005747 5.2e-22 109.4 117 53.0
Duzib132G1264 Durio zibethinus HOM05D004801 ORTHO05D005747 6.8e-22 109.0 195 37.9
Lalb_Chr14g0366971 Lupinus albus HOM05D004801 ORTHO05D005747 6.8e-22 109.0 83 63.9
Solyc10g008320.1 Solanum lycopersicum HOM05D004801 ORTHO05D005747 6.8e-22 109.0 282 34.0
GSVIVG01020552001 Vitis vinifera HOM05D004801 ORTHO05D005747 8.9e-22 108.6 94 55.3
Medtr2g090385 Medicago truncatula HOM05D004801 ORTHO05D005747 1.2e-21 108.2 90 61.1
Phvul.004G108200 Phaseolus vulgaris HOM05D004801 ORTHO05D005747 1.2e-21 108.2 85 60.0
Aqoxy4G01981 Aquilegia oxysepala HOM05D004801 ORTHO05D005747 1.5e-21 107.8 94 55.3
Actinidia11029 Actinidia chinensis HOM05D004801 ORTHO05D005747 2.6e-21 107.1 200 44.5
MSTRG.12824 Avicennia marina HOM05D004801 ORTHO05D005747 2.6e-21 107.1 90 61.1
HanXRQChr17g0559281 Helianthus annuus HOM05D004801 ORTHO05D005747 2.6e-21 107.1 95 60.0
VMungo0464G0320 Vigna mungo HOM05D004801 ORTHO05D005747 3.4e-21 106.7 201 39.3
A08p20130 Brassica napus HOM05D004801 ORTHO05D005747 4.4e-21 106.3 205 38.5
Nitab4.5_0000638g0250 Nicotiana tabacum HOM05D004801 ORTHO05D005747 4.4e-21 106.3 105 54.3
Psat5g270840 Pisum sativum HOM05D004801 ORTHO05D005747 4.4e-21 106.3 196 48.5
AUR62022461 Chenopodium quinoa HOM05D004801 ORTHO05D005747 5.8e-21 105.9 107 53.3
AUR62040063 Chenopodium quinoa HOM05D004801 ORTHO05D005747 7.6e-21 105.5 101 55.4
PGSC0003DMG400018341 Solanum tuberosum HOM05D004801 ORTHO05D005747 7.6e-21 105.5 86 60.5
BraA08t33972Z Brassica rapa HOM05D004801 ORTHO05D005747 9.9e-21 105.1 205 40.5
Nitab4.5_0014741g0010 Nicotiana tabacum HOM05D004801 ORTHO05D005747 9.9e-21 105.1 105 52.4
Sopen07g027930 Solanum pennellii HOM05D004801 ORTHO05D005747 9.9e-21 105.1 86 59.3
SalBow1G6004 Salvia bowleyana HOM05D004801 ORTHO05D005747 1.3e-20 104.8 83 63.9
Dinv26411 Davidia involucrata HOM05D004801 ORTHO05D005747 2.2e-20 104.0 104 54.8
SalBow1G1046 Salvia bowleyana HOM05D004801 ORTHO05D005747 2.2e-20 104.0 84 63.1
Sp7g26270 Schrenkiella parvula HOM05D004801 ORTHO05D005747 2.2e-20 104.0 99 52.5
SGA_v2.0_scaffold34G13950 Striga asiatica HOM05D004801 ORTHO05D005747 2.2e-20 104.0 107 51.4
BcaC09g50492 Brassica carinata HOM05D004801 ORTHO05D005747 2.9e-20 103.6 106 53.8
C01p24790 Brassica napus HOM05D004801 ORTHO05D005747 2.9e-20 103.6 106 53.8
BolC1t02426H Brassica oleracea HOM05D004801 ORTHO05D005747 2.9e-20 103.6 106 53.8
Glyma.12G204500 Glycine max HOM05D004801 ORTHO05D005747 2.9e-20 103.6 85 58.8
BcaC07g38324 Brassica carinata HOM05D004801 ORTHO05D005747 3.8e-20 103.2 97 55.7
C08p10790 Brassica napus HOM05D004801 ORTHO05D005747 3.8e-20 103.2 97 55.7
CARHR236030 Cardamine hirsuta HOM05D004801 ORTHO05D005747 6.4e-20 102.4 114 48.2
Thhalv10027270m.g Eutrema salsugineum HOM05D004801 ORTHO05D005747 6.4e-20 102.4 100 53.0
FAN09G3815 Fragaria x ananassa HOM05D004801 ORTHO05D005747 6.4e-20 102.4 81 60.5
Lalb_Chr24g0399901 Lupinus albus HOM05D004801 ORTHO05D005747 6.4e-20 102.4 203 36.9
Os06g0115700 Oryza sativa ssp. japonica HOM05D004801 ORTHO05D005747 6.4e-20 102.4 87 58.6
BraA01t01904Z Brassica rapa HOM05D004801 ORTHO05D005747 8.4e-20 102.1 105 53.3
FAN02G2956 Fragaria x ananassa HOM05D004801 ORTHO05D005747 8.4e-20 102.1 100 54.0
Peaxi162Scf00132g00008 Petunia axillaris HOM05D004801 ORTHO05D005747 8.4e-20 102.1 107 54.2
unitig_46.g18595 Utricularia gibba HOM05D004801 ORTHO05D005747 8.4e-20 102.1 100 55.0
Cpa.g.sc34.170 Carica papaya HOM05D004801 ORTHO05D005747 1.1e-19 101.7 88 61.4
BcaB03g12566 Brassica carinata HOM05D004801 ORTHO05D005747 1.4e-19 101.3 83 59.0
RcHm_v2.0_Chr2g0126621 Rosa chinensis HOM05D004801 ORTHO05D005747 1.4e-19 101.3 101 53.5
Zm00001eb269130 Zea mays HOM05D004801 ORTHO05D005747 1.4e-19 101.3 81 61.7
AT4G28310 Arabidopsis thaliana HOM05D004801 ORTHO05D005747 1.9e-19 100.9 111 48.6
CSS0019593 Camellia sinensis var. sinensis HOM05D004801 ORTHO05D005747 1.9e-19 100.9 321 37.1
FvH4_6g26250 Fragaria vesca HOM05D004801 ORTHO05D005747 1.9e-19 100.9 81 59.3
BolC8t48753H Brassica oleracea HOM05D004801 ORTHO05D005747 2.4e-19 100.5 99 54.5
DCAR_013013 Daucus carota HOM05D004801 ORTHO05D005747 2.4e-19 100.5 195 36.4
Lsat_1_v5_gn_8_135941 Lactuca sativa HOM05D004801 ORTHO05D005747 3.2e-19 100.1 76 65.8
Solyc07g053950.1 Solanum lycopersicum HOM05D004801 ORTHO05D005747 3.2e-19 100.1 86 58.1
Carub.0007s1244 Capsella rubella HOM05D004801 ORTHO05D005747 4.1e-19 99.8 84 54.8
Psat5g272360 Pisum sativum HOM05D004801 ORTHO05D005747 5.4e-19 99.4 81 63.0
SGA_v2.0_scaffold70G23526 Striga asiatica HOM05D004801 ORTHO05D005747 5.4e-19 99.4 254 37.8
TPR.G6396 Trifolium pratense HOM05D004801 ORTHO05D005747 5.4e-19 99.4 202 37.6
arahy.Tifrunner.gnm1.ann1.KJ31KE Arachis hypogaea HOM05D004801 ORTHO05D005747 7.1e-19 99.0 310 41.0
BcaNung01577 Brassica carinata HOM05D004801 ORTHO05D005747 7.1e-19 99.0 106 50.9
MBI18_g28947_MAGBIO Magnolia biondii HOM05D004801 ORTHO05D005747 7.1e-19 99.0 109 54.1
ATR0124G030 Amborella trichopoda HOM05D004801 ORTHO05D005747 9.2e-19 98.6 84 59.5
AL7G24290 Arabidopsis lyrata HOM05D004801 ORTHO05D005747 9.2e-19 98.6 84 56.0
arahy.Tifrunner.gnm1.ann1.G6M6JD Arachis hypogaea HOM05D004801 ORTHO05D005747 1.6e-18 97.8 310 40.6
Aa31LG2G22170 Aethionema arabicum HOM05D004801 ORTHO05D005747 2.7e-18 97.1 84 54.8
THA.LOC104824700 Tarenaya hassleriana HOM05D004801 ORTHO05D005747 2.7e-18 97.1 114 45.6
Manes.13G146300 Manihot esculenta HOM05D004801 ORTHO05D005747 3.5e-18 96.7 315 30.5
Prupe.3G132500 Prunus persica HOM05D004801 ORTHO05D005747 3.5e-18 96.7 97 54.6
Glyma.13G296800 Glycine max HOM05D004801 ORTHO05D005747 4.6e-18 96.3 85 57.6
MD17G1239900 Malus domestica HOM05D004801 ORTHO05D005747 7.8e-18 95.5 82 54.9
unitig_37.g12306 Utricularia gibba HOM05D004801 ORTHO05D005747 1.3e-17 94.7 104 51.0
Aa31LG10G480 Aethionema arabicum HOM05D004801 ORTHO05D005747 5.1e-17 92.8 100 49.0
BcaC06g32627 Brassica carinata HOM05D004801 ORTHO05D005747 1.1e-16 91.7 82 54.9
BcaC06g32628 Brassica carinata HOM05D004801 ORTHO05D005747 1.1e-16 91.7 82 54.9
Dinv23632 Davidia involucrata HOM05D004801 ORTHO05D005747 1.1e-16 91.7 323 38.1
SEGI_29524 Sequoiadendron giganteum HOM05D004801 ORTHO05D005747 2.5e-16 90.5 118 43.2
CSS0042810 Camellia sinensis var. sinensis HOM05D004801 ORTHO05D005747 9.6e-16 88.6 88 55.7
Mapoly0078s0017 Marchantia polymorpha HOM05D004801 ORTHO05D005747 1.2e-15 88.2 109 44.0
AagrBONN_evm.TU.Sc2ySwM_344.3370 Anthoceros agrestis HOM05D004801 ORTHO05D005747 3.4e-13 80.1 85 48.2
C07p56130 Brassica napus HOM05D004801 ORTHO05D005747 7.6e-13 79.0 81 48.1
A03p58010 Brassica napus HOM05D004801 ORTHO05D005747 9.9e-13 78.6 107 43.9
BraA03t14864Z Brassica rapa HOM05D004801 ORTHO05D005747 9.9e-13 78.6 107 43.9
Pp3c17_13330 Physcomitrium patens HOM05D004801 ORTHO05D005747 4.9e-12 76.3 108 39.8
BolC7t46088H Brassica oleracea HOM05D004801 ORTHO05D005747 1.4e-11 74.7 103 41.7
Lj1P721T18 Lonicera japonica HOM05D004801 ORTHO05D005747 2.4e-11 73.9 54 61.1
Pp3c14_12710 Physcomitrium patens HOM05D004801 ORTHO05D005747 4.2e-11 73.2 86 44.2


User provided reference genes

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