Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO170G5614 Papaver somniferum HOM05D007255 ORTHO05D009052 5.9e-152 540.8 269 100.0
PSO357G0536 Papaver somniferum HOM05D007255 ORTHO05D009052 1.4e-145 519.6 269 96.3
TAR365G1235 Trochodendron aralioides HOM05D007255 ORTHO05D009052 1.1e-78 297.4 188 78.7
Aqoxy5G00040 Aquilegia oxysepala HOM05D007255 ORTHO05D009052 3.3e-78 295.8 239 66.9
Dinv10428 Davidia involucrata HOM05D007255 ORTHO05D009052 1.5e-75 287.0 268 60.4
Thecc.01G211700 Theobroma cacao HOM05D007255 ORTHO05D009052 4.5e-75 285.4 210 67.6
Sabra02G0190600 Salix brachista HOM05D007255 ORTHO05D009052 5.9e-75 285.0 231 62.3
CiPaw.13G054800 Carya illinoinensis HOM05D007255 ORTHO05D009052 7.6e-75 284.6 213 67.6
Potri.002G250500 Populus trichocarpa HOM05D007255 ORTHO05D009052 7.6e-75 284.6 204 68.6
FAN24G0557 Fragaria x ananassa HOM05D007255 ORTHO05D009052 1.7e-74 283.5 207 69.1
FvH4_2g17870 Fragaria vesca HOM05D007255 ORTHO05D009052 2.2e-74 283.1 207 69.1
FAN15G3515 Fragaria x ananassa HOM05D007255 ORTHO05D009052 2.2e-74 283.1 207 68.6
FAN27G1291 Fragaria x ananassa HOM05D007255 ORTHO05D009052 2.2e-74 283.1 207 68.6
Ciclev10016497m.g Citrus clementina HOM05D007255 ORTHO05D009052 2.9e-74 282.7 211 68.7
QL09p046138 Quercus lobata HOM05D007255 ORTHO05D009052 2.9e-74 282.7 267 57.3
RcHm_v2.0_Chr6g0282891 Rosa chinensis HOM05D007255 ORTHO05D009052 1.1e-73 280.8 207 68.6
PGR044G0433 Punica granatum HOM05D007255 ORTHO05D009052 1.9e-73 280.0 212 66.5
Rhsim01G0248900 Rhododendron simsii HOM05D007255 ORTHO05D009052 2.5e-73 279.6 193 72.0
Actinidia34549 Actinidia chinensis HOM05D007255 ORTHO05D009052 4.2e-73 278.9 270 59.3
Prupe.8G191100 Prunus persica HOM05D007255 ORTHO05D009052 5.5e-73 278.5 216 65.7
COL.COLO4_28926 Corchorus olitorius HOM05D007255 ORTHO05D009052 7.2e-73 278.1 213 65.7
Gorai.007G159200 Gossypium raimondii HOM05D007255 ORTHO05D009052 9.3e-73 277.7 211 66.8
Nn1g08274 Nelumbo nucifera HOM05D007255 ORTHO05D009052 3.6e-72 275.8 331 51.7
Atru.chr6.3551 Acer truncatum HOM05D007255 ORTHO05D009052 7.9e-72 274.6 220 64.1
Gohir.D11G148500 Gossypium hirsutum HOM05D007255 ORTHO05D009052 7.9e-72 274.6 211 66.4
Cc01_g16200 Coffea canephora HOM05D007255 ORTHO05D009052 1.0e-71 274.2 216 65.7
Gohir.A11G142200 Gossypium hirsutum HOM05D007255 ORTHO05D009052 1.8e-71 273.5 211 65.9
Cpa.g.sc8.78 Carica papaya HOM05D007255 ORTHO05D009052 3.9e-71 272.3 232 62.1
Eucgr.K02090 Eucalyptus grandis HOM05D007255 ORTHO05D009052 5.1e-71 271.9 206 67.5
Hma1.2p1_0161F.1_g071360 Hydrangea macrophylla HOM05D007255 ORTHO05D009052 8.7e-71 271.2 268 56.3
SGA_v2.0_scaffold29G12102 Striga asiatica HOM05D007255 ORTHO05D009052 8.7e-71 271.2 249 58.2
Duzib211G0668 Durio zibethinus HOM05D007255 ORTHO05D009052 1.5e-70 270.4 209 64.6
Sc05g0001760 Simmondsia chinensis HOM05D007255 ORTHO05D009052 2.5e-70 269.6 209 66.0
CANSAT01G0773 Cannabis sativa HOM05D007255 ORTHO05D009052 7.4e-70 268.1 207 64.3
Carub.0003s0699 Capsella rubella HOM05D007255 ORTHO05D009052 7.4e-70 268.1 203 68.0
Manes.13G054000 Manihot esculenta HOM05D007255 ORTHO05D009052 7.4e-70 268.1 203 65.5
Oeu064665.2 Olea europaea HOM05D007255 ORTHO05D009052 1.3e-69 267.3 286 53.8
Phvul.010G031200 Phaseolus vulgaris HOM05D007255 ORTHO05D009052 1.3e-69 267.3 211 64.9
AL3G18750 Arabidopsis lyrata HOM05D007255 ORTHO05D009052 1.6e-69 266.9 203 67.5
Ca_23187_v3 Cicer arietinum L. HOM05D007255 ORTHO05D009052 1.6e-69 266.9 215 62.8
Ca_30803_v3 Cicer arietinum L. HOM05D007255 ORTHO05D009052 1.6e-69 266.9 215 62.8
MSTRG.18490 Avicennia marina HOM05D007255 ORTHO05D009052 2.2e-69 266.5 215 63.7
vmacro14695 Vaccinium macrocarpon HOM05D007255 ORTHO05D009052 2.2e-69 266.5 193 68.9
CARHR082090 Cardamine hirsuta HOM05D007255 ORTHO05D009052 2.8e-69 266.2 204 67.2
Aa31LG5G18020 Aethionema arabicum HOM05D007255 ORTHO05D009052 3.7e-69 265.8 203 66.5
Medtr8g011480 Medicago truncatula HOM05D007255 ORTHO05D009052 1.1e-68 264.2 213 62.4
AT3G07440 Arabidopsis thaliana HOM05D007255 ORTHO05D009052 2.4e-68 263.1 203 67.0
Thhalv10004862m.g Eutrema salsugineum HOM05D007255 ORTHO05D009052 3.1e-68 262.7 201 65.2
Lsat_1_v5_gn_5_178401 Lactuca sativa HOM05D007255 ORTHO05D009052 4.1e-68 262.3 204 65.7
arahy.Tifrunner.gnm1.ann1.TV22BE Arachis hypogaea HOM05D007255 ORTHO05D009052 6.9e-68 261.5 216 63.0
Hund02793 Selenicereus undatus HOM05D007255 ORTHO05D009052 1.5e-67 260.4 216 62.5
MD10G1152600 Malus domestica HOM05D007255 ORTHO05D009052 2.0e-67 260.0 235 58.7
Nitab4.5_0005972g0030 Nicotiana tabacum HOM05D007255 ORTHO05D009052 4.5e-67 258.8 218 60.6
Nitab4.5_0000038g0080 Nicotiana tabacum HOM05D007255 ORTHO05D009052 5.9e-67 258.5 218 60.6
Lalb_Chr12g0210041 Lupinus albus HOM05D007255 ORTHO05D009052 7.7e-67 258.1 207 63.8
SalBow6G0858 Salvia bowleyana HOM05D007255 ORTHO05D009052 7.7e-67 258.1 217 62.7
BraA06t26826Z Brassica rapa HOM05D007255 ORTHO05D009052 1.0e-66 257.7 205 65.4
TPR.G15196 Trifolium pratense HOM05D007255 ORTHO05D009052 1.3e-66 257.3 209 62.2
A06p39120 Brassica napus HOM05D007255 ORTHO05D009052 1.7e-66 256.9 205 65.4
TWI18G1029 Tripterygium wilfordii HOM05D007255 ORTHO05D009052 2.9e-66 256.1 192 67.2
C07p39220 Brassica napus HOM05D007255 ORTHO05D009052 6.5e-66 255.0 204 64.7
BolC7t44442H Brassica oleracea HOM05D007255 ORTHO05D009052 6.5e-66 255.0 204 64.7
Sp2g18890 Schrenkiella parvula HOM05D007255 ORTHO05D009052 6.5e-66 255.0 201 64.2
Glyma.03G089600 Glycine max HOM05D007255 ORTHO05D009052 8.5e-66 254.6 209 62.7
Solyc09g058990.3 Solanum lycopersicum HOM05D007255 ORTHO05D009052 8.5e-66 254.6 219 60.7
THA.LOC104818995 Tarenaya hassleriana HOM05D007255 ORTHO05D009052 2.5e-65 253.1 203 64.0
Sopen09g020080 Solanum pennellii HOM05D007255 ORTHO05D009052 5.5e-65 251.9 219 60.3
Migut.D00726 Erythranthe guttata HOM05D007255 ORTHO05D009052 7.2e-65 251.5 231 56.3
Aqoxy2G00044 Aquilegia oxysepala HOM05D007255 ORTHO05D009052 4.6e-64 248.8 184 71.7
Nn1g03664 Nelumbo nucifera HOM05D007255 ORTHO05D009052 6.1e-64 248.4 224 62.1
ECA248G0740 Erigeron canadensis HOM05D007255 ORTHO05D009052 1.4e-63 247.3 218 57.8
Ah.11g051090 Amaranthus hybridus HOM05D007255 ORTHO05D009052 8.8e-63 244.6 266 51.1
EL10Ac5g10635 Beta vulgaris HOM05D007255 ORTHO05D009052 2.6e-62 243.0 217 60.4
BcaC06g30785 Brassica carinata HOM05D007255 ORTHO05D009052 9.7e-62 241.1 197 61.9
Lj3g0001968 Lotus japonicus HOM05D007255 ORTHO05D009052 9.7e-62 241.1 234 55.6
Os02g0478500 Oryza sativa ssp. japonica HOM05D007255 ORTHO05D009052 3.7e-61 239.2 159 73.6
ATR0491G001 Amborella trichopoda HOM05D007255 ORTHO05D009052 6.9e-60 235.0 167 70.7
arahy.Tifrunner.gnm1.ann1.UDT0KZ Arachis hypogaea HOM05D007255 ORTHO05D009052 1.5e-59 233.8 173 65.9
AUR62028710 Chenopodium quinoa HOM05D007255 ORTHO05D009052 2.0e-59 233.4 246 56.5
Zm00001eb241080 Zea mays HOM05D007255 ORTHO05D009052 2.6e-59 233.0 169 69.8
Sed0001908 Sechium edule HOM05D007255 ORTHO05D009052 7.7e-59 231.5 208 58.7
CsaV3_7G026920 Cucumis sativus L. HOM05D007255 ORTHO05D009052 1.3e-58 230.7 190 61.6
MELO3C012737.2 Cucumis melo HOM05D007255 ORTHO05D009052 5.0e-58 228.8 209 58.9
AT5G48530 Arabidopsis thaliana HOM05D007255 ORTHO05D009052 5.5e-57 225.3 165 67.9
unitig_62.g23864 Utricularia gibba HOM05D007255 ORTHO05D009052 5.5e-57 225.3 226 53.5
ClCG09G008130 Citrullus lanatus HOM05D007352 ORTHO05D009052 4.7e-56 222.2 254 51.2
unitig_64.g29772 Utricularia gibba HOM05D007255 ORTHO05D009052 6.7e-55 218.4 237 50.6
CSS0043687 Camellia sinensis var. sinensis HOM05D007255 ORTHO05D009052 7.4e-54 214.9 187 63.6
DCAR_018628 Daucus carota HOM05D007255 ORTHO05D009052 9.7e-54 214.5 137 75.9
HanXRQChr01g0025051 Helianthus annuus HOM05D007255 ORTHO05D009052 9.7e-54 214.5 198 59.6
GSVIVG01006076001 Vitis vinifera HOM05D007255 ORTHO05D009052 3.1e-52 209.5 188 60.1
Lj1A100G17 Lonicera japonica HOM05D007255 ORTHO05D009052 2.0e-51 206.8 202 57.9
Haze_03304 Corylus avellana HOM05D007255 ORTHO05D009052 7.7e-51 204.9 141 68.8
Peaxi162Scf00335g01514 Petunia axillaris HOM05D007255 ORTHO05D009052 1.2e-46 191.0 219 50.7
Actinidia23788 Actinidia chinensis HOM05D007255 ORTHO05D009052 2.0e-46 190.3 188 56.9
Glyma.16G083400 Glycine max HOM05D007255 ORTHO05D009052 2.7e-35 153.3 113 68.1
HPP92_024260 Vanilla planifolia HOM05D007255 ORTHO05D009052 3.8e-34 149.4 137 58.4
AUR62008128 Chenopodium quinoa HOM05D007255 ORTHO05D009052 6.5e-34 148.7 136 62.5
VMungo0331G1225 Vigna mungo HOM05D007255 ORTHO05D009052 5.9e-27 125.6 121 57.9
HPP92_024228 Vanilla planifolia HOM05D007255 ORTHO05D009052 5.2e-23 112.5 65 76.9
VMungo0331G0526 Vigna mungo HOM05D007255 ORTHO05D009052 5.4e-20 102.4 74 67.6
SEGI_09952 Sequoiadendron giganteum HOM05D007255 ORTHO05D009052 3.3e-17 93.2 83 57.8
CDE04G1852 Ceratophyllum demersum HOM05D007255 ORTHO05D009052 5.6e-17 92.4 85 56.5
Prupe.8G191300 Prunus persica HOM05D007255 ORTHO05D009052 2.3e-15 87.0 69 56.5
VMungo0251G0654 Vigna mungo HOM05D007255 ORTHO05D009052 3.7e-13 79.7 85 51.8
GSVIVG01006250001 Vitis vinifera HOM05D007255 ORTHO05D009052 1.6e-11 74.3 79 54.4


User provided reference genes

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