Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO170G5517 Papaver somniferum HOM05D007454 ORTHO05D009382 6.7e-79 297.4 159 100.0
PSO017G6963 Papaver somniferum HOM05D007454 ORTHO05D009382 4.2e-73 278.1 162 93.2
FAN15G1931 Fragaria x ananassa HOM05D007454 ORTHO05D009382 1.1e-17 94.0 161 36.6
Aqoxy7G01923 Aquilegia oxysepala HOM05D007454 ORTHO05D009382 4.3e-17 92.0 154 38.3
FvH4_2g29860 Fragaria vesca HOM05D007454 ORTHO05D009382 1.6e-16 90.1 162 37.0
QL12p031592 Quercus lobata HOM05D007454 ORTHO05D009382 3.6e-16 89.0 155 35.5
FAN24G1693 Fragaria x ananassa HOM05D007454 ORTHO05D009382 4.8e-16 88.6 162 36.4
FAN27G1093 Fragaria x ananassa HOM05D007454 ORTHO05D009382 6.2e-16 88.2 162 36.4
RcHm_v2.0_Chr6g0298931 Rosa chinensis HOM05D007454 ORTHO05D009382 6.2e-16 88.2 165 35.8
Cfa013203 Carpinus fangiana HOM05D007454 ORTHO05D009382 1.4e-15 87.0 162 37.0
CSS0001844 Camellia sinensis var. sinensis HOM05D007454 ORTHO05D009382 1.8e-15 86.7 160 37.5
PGSC0003DMG400002261 Solanum tuberosum HOM05D007454 ORTHO05D009382 1.8e-15 86.7 131 42.7
Hund25693 Selenicereus undatus HOM05D007454 ORTHO05D009382 5.3e-15 85.1 132 36.4
FAN20G1122 Fragaria x ananassa HOM05D007454 ORTHO05D009382 6.9e-15 84.7 160 35.6
Prupe.1G471000 Prunus persica HOM05D007454 ORTHO05D009382 6.9e-15 84.7 166 36.7
Solyc08g067630.3 Solanum lycopersicum HOM05D007454 ORTHO05D009382 9.0e-15 84.3 129 42.6
TAR626G1515 Trochodendron aralioides HOM05D007454 ORTHO05D009382 2.0e-14 83.2 129 39.5
Manes.03G018900 Manihot esculenta HOM05D007454 ORTHO05D009382 2.6e-14 82.8 127 42.5
Nitab4.5_0000125g0360 Nicotiana tabacum HOM05D007454 ORTHO05D009382 3.4e-14 82.4 160 39.4
Rhsim02G0189300 Rhododendron simsii HOM05D007454 ORTHO05D009382 4.4e-14 82.0 154 40.3
Actinidia29311 Actinidia chinensis HOM05D007454 ORTHO05D009382 9.9e-14 80.9 132 40.9
EL10Ac2g02557 Beta vulgaris HOM05D007454 ORTHO05D009382 9.9e-14 80.9 132 40.2
TAR383G0100 Trochodendron aralioides HOM05D007454 ORTHO05D009382 9.9e-14 80.9 129 41.1
Nitab4.5_0003201g0010 Nicotiana tabacum HOM05D007454 ORTHO05D009382 1.3e-13 80.5 160 39.4
TWI34G0809 Tripterygium wilfordii HOM05D007454 ORTHO05D009382 1.3e-13 80.5 124 45.2
CANSAT11G0218 Cannabis sativa HOM05D007454 ORTHO05D009382 3.8e-13 79.0 94 46.8
CiPaw.08G014500 Carya illinoinensis HOM05D007454 ORTHO05D009382 6.4e-13 78.2 133 37.6
MD15G1117600 Malus domestica HOM05D007454 ORTHO05D009382 6.4e-13 78.2 164 34.8
CiPaw.07G219000 Carya illinoinensis HOM05D007454 ORTHO05D009382 1.4e-12 77.0 136 37.5
Ciclev10009811m.g Citrus clementina HOM05D007454 ORTHO05D009382 1.4e-12 77.0 129 39.5
Atru.chr7.2345 Acer truncatum HOM05D007454 ORTHO05D009382 1.9e-12 76.6 131 39.7
CAN.G506.13 Capsicum annuum HOM05D007454 ORTHO05D009382 1.9e-12 76.6 162 38.9
Potri.006G248300 Populus trichocarpa HOM05D007454 ORTHO05D009382 1.9e-12 76.6 155 35.5
Duzib150G0674 Durio zibethinus HOM05D007454 ORTHO05D009382 4.2e-12 75.5 128 38.3
Actinidia13275 Actinidia chinensis HOM05D007454 ORTHO05D009382 7.1e-12 74.7 130 37.7
MD08G1140700 Malus domestica HOM05D007454 ORTHO05D009382 7.1e-12 74.7 161 35.4
DCAR_001472 Daucus carota HOM05D007454 ORTHO05D009382 1.2e-11 73.9 156 32.7
Thecc.09G146500 Theobroma cacao HOM05D007454 ORTHO05D009382 1.2e-11 73.9 130 36.2
Haze_21608 Corylus avellana HOM05D007454 ORTHO05D009382 1.6e-11 73.6 128 38.3
Dinv11595 Davidia involucrata HOM05D007454 ORTHO05D009382 2.1e-11 73.2 120 45.0
Gorai.007G350400 Gossypium raimondii HOM05D007454 ORTHO05D009382 3.5e-11 72.4 134 38.8
THA.LOC104803822 Tarenaya hassleriana HOM05D007454 ORTHO05D009382 4.6e-11 72.0 134 35.8
Nn2g11862 Nelumbo nucifera HOM05D007454 ORTHO05D009382 7.9e-11 71.2 134 35.8
COL.COLO4_24027 Corchorus olitorius HOM05D007454 ORTHO05D009382 1.0e-10 70.9 128 37.5
Gohir.A11G304800 Gossypium hirsutum HOM05D007454 ORTHO05D009382 1.0e-10 70.9 134 41.0
Gohir.D11G320200 Gossypium hirsutum HOM05D007454 ORTHO05D009382 1.0e-10 70.9 131 38.9
Manes.16G117700 Manihot esculenta HOM05D007454 ORTHO05D009382 1.0e-10 70.9 122 38.5
HanXRQChr01g0030031 Helianthus annuus HOM05D007454 ORTHO05D009382 1.3e-10 70.5 131 37.4
Sabra06G0194300 Salix brachista HOM05D007454 ORTHO05D009382 2.3e-10 69.7 130 38.5
arahy.Tifrunner.gnm1.ann1.X4UCF1 Arachis hypogaea HOM05D007454 ORTHO05D009382 5.1e-10 68.6 141 35.5
ECA248G0251 Erigeron canadensis HOM05D007454 ORTHO05D009382 5.1e-10 68.6 134 37.3
Lalb_Chr23g0268861 Lupinus albus HOM05D007454 ORTHO05D009382 5.1e-10 68.6 107 40.2
unitig_748.g8205 Utricularia gibba HOM05D007454 ORTHO05D009382 1.1e-09 67.4 136 34.6
arahy.Tifrunner.gnm1.ann1.AC8RV3 Arachis hypogaea HOM05D007454 ORTHO05D009382 1.9e-09 66.6 129 36.4
Sopen08g021580 Solanum pennellii HOM05D007454 ORTHO05D009382 1.9e-09 66.6 112 40.2
A04p19830 Brassica napus HOM05D007454 ORTHO05D009382 2.5e-09 66.2 69 50.7
BraA04t17571Z Brassica rapa HOM05D007454 ORTHO05D009382 2.5e-09 66.2 69 50.7
Thhalv10000347m.g Eutrema salsugineum HOM05D007454 ORTHO05D009382 4.3e-09 65.5 75 48.0
BcaB06g28081 Brassica carinata HOM05D007454 ORTHO05D009382 5.6e-09 65.1 69 49.3
Eucgr.C01807 Eucalyptus grandis HOM05D007454 ORTHO05D009382 5.6e-09 65.1 102 38.2
VMungo1309G0733 Vigna mungo HOM05D007454 ORTHO05D009382 5.6e-09 65.1 143 33.6
Cc11_g01380 Coffea canephora HOM05D007454 ORTHO05D009382 7.3e-09 64.7 124 34.7
SalBow4G3079 Salvia bowleyana HOM05D007454 ORTHO05D009382 7.3e-09 64.7 73 49.3
Migut.A00288 Erythranthe guttata HOM05D007454 ORTHO05D009382 9.6e-09 64.3 96 39.6
Sp4g05200 Schrenkiella parvula HOM05D007454 ORTHO05D009382 9.6e-09 64.3 80 45.0
Glyma.06G072000 Glycine max HOM05D007454 ORTHO05D009382 1.3e-08 63.9 133 36.1
AL4G17110 Arabidopsis lyrata HOM05D007454 ORTHO05D009382 1.6e-08 63.5 67 52.2
CARHR115660 Cardamine hirsuta HOM05D007454 ORTHO05D009382 1.6e-08 63.5 63 54.0
BcaC02g08336 Brassica carinata HOM05D007454 ORTHO05D009382 2.8e-08 62.8 69 49.3
C04p55570 Brassica napus HOM05D007454 ORTHO05D009382 2.8e-08 62.8 69 49.3
BolC4t27081H Brassica oleracea HOM05D007454 ORTHO05D009382 2.8e-08 62.8 69 49.3
ClCG08G012990 Citrullus lanatus HOM05D007454 ORTHO05D009382 2.8e-08 62.8 162 29.6
AT2G25625 Arabidopsis thaliana HOM05D007454 ORTHO05D009382 4.8e-08 62.0 67 52.2
Phvul.009G096400 Phaseolus vulgaris HOM05D007454 ORTHO05D009382 4.8e-08 62.0 82 46.3
Sed0012550 Sechium edule HOM05D007454 ORTHO05D009382 6.2e-08 61.6 156 32.1
Cpa.g.sc603.1 Carica papaya HOM05D007454 ORTHO05D009382 8.1e-08 61.2 38 68.4
MELO3C003676.2 Cucumis melo HOM05D007454 ORTHO05D009382 8.1e-08 61.2 105 34.3
Lj1g0018180 Lotus japonicus HOM05D007454 ORTHO05D009382 8.1e-08 61.2 64 50.0
Carub.0004s0541 Capsella rubella HOM05D007454 ORTHO05D009382 1.1e-07 60.8 35 77.1
Lsat_1_v5_gn_1_45380 Lactuca sativa HOM05D007454 ORTHO05D009382 3.1e-07 59.3 100 37.0
Sed0003243 Sechium edule HOM05D007454 ORTHO05D009382 3.1e-07 59.3 122 32.0
Sc09g0008740 Simmondsia chinensis HOM05D007454 ORTHO05D009382 4.0e-07 58.9 123 34.1
TPR.G27330 Trifolium pratense HOM05D007454 ORTHO05D009382 4.0e-07 58.9 149 30.9
CsaV3_3G046620 Cucumis sativus L. HOM05D007454 ORTHO05D009382 5.3e-07 58.5 106 36.8
CDE06G2386 Ceratophyllum demersum HOM05D007454 ORTHO05D009382 9.0e-07 57.8 134 32.1
Os05g0575000 Oryza sativa ssp. japonica HOM05D007454 ORTHO05D009382 1.2e-06 57.4 38 63.2
Ca_15708_v3 Cicer arietinum L. HOM05D007454 ORTHO05D009382 2.0e-06 56.6 145 31.7
CsaV3_2G031720 Cucumis sativus L. HOM05D007454 ORTHO05D009382 2.6e-06 56.2 45 55.6
Glyma.04G070000 Glycine max HOM05D007454 ORTHO05D009382 2.6e-06 56.2 107 36.4
Aa31LG1G8530 Aethionema arabicum HOM05D007454 ORTHO05D009382 3.4e-06 55.8 41 63.4
MELO3C011223.2 Cucumis melo HOM05D007454 ORTHO05D009382 3.4e-06 55.8 64 46.9
Oeu032495.1 Olea europaea HOM05D007454 ORTHO05D009382 3.4e-06 55.8 122 34.4
CDE07G1568 Ceratophyllum demersum HOM05D007454 ORTHO05D009382 4.5e-06 55.5 108 31.5
Medtr3g107890 Medicago truncatula HOM05D007454 ORTHO05D009382 4.5e-06 55.5 146 35.6
Zm00001eb296620 Zea mays HOM05D007454 ORTHO05D009382 9.9e-06 54.3 97 34.0


User provided reference genes

Program Settings