Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO170G5464 Papaver somniferum HOM05D006881 ORTHO05D008423 1.2e-69 266.5 146 100.0
PSO210G1559 Papaver somniferum HOM05D006881 ORTHO05D008423 4.8e-63 244.6 146 94.5
Sabra08G0154800 Salix brachista HOM05D006881 ORTHO05D008423 5.3e-38 161.4 123 68.3
Manes.03G192600 Manihot esculenta HOM05D006881 ORTHO05D008423 1.7e-36 156.4 112 75.0
vmacro15245 Vaccinium macrocarpon HOM05D006881 ORTHO05D008423 1.7e-36 156.4 116 71.6
Aqoxy2G03052 Aquilegia oxysepala HOM05D006881 ORTHO05D008423 2.2e-36 156.0 133 67.7
Dinv38306 Davidia involucrata HOM05D006881 ORTHO05D008423 2.2e-36 156.0 106 77.4
GSVIVG01017769001 Vitis vinifera HOM05D006881 ORTHO05D008423 2.2e-36 156.0 119 69.7
Phvul.009G245900 Phaseolus vulgaris HOM05D006881 ORTHO05D008423 5.0e-36 154.8 117 70.1
TAR636G2672 Trochodendron aralioides HOM05D006881 ORTHO05D008423 8.5e-36 154.1 109 71.6
arahy.Tifrunner.gnm1.ann1.E8HU74 Arachis hypogaea HOM05D006881 ORTHO05D008423 1.9e-35 152.9 109 69.7
CSS0005297 Camellia sinensis var. sinensis HOM05D006881 ORTHO05D008423 1.9e-35 152.9 119 68.1
CSS0009612 Camellia sinensis var. sinensis HOM05D006881 ORTHO05D008423 1.9e-35 152.9 119 68.1
Psat1g151960 Pisum sativum HOM05D006881 ORTHO05D008423 3.2e-35 152.1 108 73.1
EL10Ac3g06585 Beta vulgaris HOM05D006881 ORTHO05D008423 1.2e-34 150.2 123 66.7
Gohir.A02G048200 Gossypium hirsutum HOM05D006881 ORTHO05D008423 1.6e-34 149.8 122 68.0
Potri.008G216700 Populus trichocarpa HOM05D006881 ORTHO05D008423 1.6e-34 149.8 123 65.9
Ciclev10005896m.g Citrus clementina HOM05D006881 ORTHO05D008423 2.7e-34 149.1 110 69.1
Atru.chr4.2800 Acer truncatum HOM05D006881 ORTHO05D008423 3.6e-34 148.7 110 72.7
DCAR_024558 Daucus carota HOM05D006881 ORTHO05D008423 6.1e-34 147.9 113 67.3
Glyma.09G046900 Glycine max HOM05D006881 ORTHO05D008423 6.1e-34 147.9 109 70.6
Lsat_1_v5_gn_3_24181 Lactuca sativa HOM05D006881 ORTHO05D008423 6.1e-34 147.9 116 65.5
AL6G29810 Arabidopsis lyrata HOM05D006881 ORTHO05D008423 7.9e-34 147.5 110 71.8
Thhalv10014829m.g Eutrema salsugineum HOM05D006881 ORTHO05D008423 7.9e-34 147.5 118 66.9
Gorai.005G059100 Gossypium raimondii HOM05D006881 ORTHO05D008423 1.0e-33 147.1 125 68.0
TPR.G23710 Trifolium pratense HOM05D006881 ORTHO05D008423 1.0e-33 147.1 118 64.4
Lalb_Chr18g0051811 Lupinus albus HOM05D006881 ORTHO05D008423 1.4e-33 146.7 117 64.1
Aa31LG11G11080 Aethionema arabicum HOM05D006881 ORTHO05D008423 1.8e-33 146.4 118 68.6
HanXRQChr17g0536111 Helianthus annuus HOM05D006881 ORTHO05D008423 1.8e-33 146.4 106 69.8
QL06p008283 Quercus lobata HOM05D006881 ORTHO05D008423 1.8e-33 146.4 114 71.1
Actinidia00041 Actinidia chinensis HOM05D006881 ORTHO05D008423 2.3e-33 146.0 145 61.4
AT5G18540 Arabidopsis thaliana HOM05D006881 ORTHO05D008423 2.3e-33 146.0 108 72.2
MBI19_g24002_MAGBIO Magnolia biondii HOM05D006881 ORTHO05D008423 2.3e-33 146.0 131 65.6
MD13G1170800 Malus domestica HOM05D006881 ORTHO05D008423 2.3e-33 146.0 111 73.0
CANSAT78G0809 Cannabis sativa HOM05D006881 ORTHO05D008423 3.0e-33 145.6 117 66.7
Carub.0006s1681 Capsella rubella HOM05D006881 ORTHO05D008423 3.0e-33 145.6 110 71.8
CAN.G223.19 Capsicum annuum HOM05D006881 ORTHO05D008423 3.0e-33 145.6 134 61.2
Peaxi162Scf00386g00414 Petunia axillaris HOM05D006881 ORTHO05D008423 3.0e-33 145.6 104 71.2
Hund20570 Selenicereus undatus HOM05D006881 ORTHO05D008423 3.0e-33 145.6 127 63.8
VMungo1309G2079 Vigna mungo HOM05D006881 ORTHO05D008423 3.0e-33 145.6 109 71.6
Ca_02413_v3 Cicer arietinum L. HOM05D002802 ORTHO05D003166 3.9e-33 145.2 118 64.4
Gohir.D02G053300 Gossypium hirsutum HOM05D006881 ORTHO05D008423 3.9e-33 145.2 125 67.2
FvH4_4g17670 Fragaria vesca HOM05D006881 ORTHO05D008423 5.1e-33 144.8 112 71.4
FAN12G2006 Fragaria x ananassa HOM05D006881 ORTHO05D008423 5.1e-33 144.8 112 71.4
FAN12G2996 Fragaria x ananassa HOM05D006881 ORTHO05D008423 5.1e-33 144.8 112 71.4
CARHR194480 Cardamine hirsuta HOM05D006881 ORTHO05D008423 1.1e-32 143.7 108 72.2
SalBow2G0124 Salvia bowleyana HOM05D006881 ORTHO05D008423 1.1e-32 143.7 121 61.2
SalBow2G2956 Salvia bowleyana HOM05D006881 ORTHO05D008423 1.1e-32 143.7 121 61.2
RcHm_v2.0_Chr4g0421611 Rosa chinensis HOM05D006881 ORTHO05D008423 1.5e-32 143.3 112 70.5
MSTRG.10082 Avicennia marina HOM05D006881 ORTHO05D008423 1.9e-32 142.9 121 59.5
CiPaw.01G150600 Carya illinoinensis HOM05D006881 ORTHO05D008423 1.9e-32 142.9 125 62.4
FAN07G1171 Fragaria x ananassa HOM05D006881 ORTHO05D008423 1.9e-32 142.9 112 70.5
FAN17G1543 Fragaria x ananassa HOM05D006881 ORTHO05D008423 1.9e-32 142.9 112 70.5
Duzib212G0198 Durio zibethinus HOM05D006881 ORTHO05D008423 2.5e-32 142.5 123 62.6
Glyma.15G154400 Glycine max HOM05D006881 ORTHO05D008423 2.5e-32 142.5 108 70.4
Solyc01g067580.4 Solanum lycopersicum HOM05D006881 ORTHO05D008423 2.5e-32 142.5 120 63.3
Cpa.g.sc16.153 Carica papaya HOM05D006881 ORTHO05D008423 4.3e-32 141.7 108 70.4
Lj6g0021421 Lotus japonicus HOM05D006881 ORTHO05D008423 5.7e-32 141.4 109 65.1
BcaB05g23335 Brassica carinata HOM05D006881 ORTHO05D008423 7.4e-32 141.0 111 67.6
Cc03_g02070 Coffea canephora HOM05D006881 ORTHO05D008423 7.4e-32 141.0 113 64.6
Prupe.1G139200 Prunus persica HOM05D006881 ORTHO05D008423 7.4e-32 141.0 132 62.1
Sp6g25790 Schrenkiella parvula HOM05D006881 ORTHO05D008423 7.4e-32 141.0 110 69.1
arahy.Tifrunner.gnm1.ann1.NXX1KJ Arachis hypogaea HOM05D006881 ORTHO05D008423 9.7e-32 140.6 128 60.2
BcaC03g13606 Brassica carinata HOM05D006881 ORTHO05D008423 9.7e-32 140.6 111 67.6
C02p10000 Brassica napus HOM05D006881 ORTHO05D008423 9.7e-32 140.6 111 67.6
PGSC0003DMG400010658 Solanum tuberosum HOM05D006881 ORTHO05D008423 9.7e-32 140.6 119 63.0
A02p04970 Brassica napus HOM05D006881 ORTHO05D008423 1.7e-31 139.8 108 69.4
THA.LOC104818851 Tarenaya hassleriana HOM05D006881 ORTHO05D008423 1.7e-31 139.8 109 66.1
Thecc.04G282000 Theobroma cacao HOM05D006881 ORTHO05D008423 1.7e-31 139.8 116 67.2
BraA02t05456Z Brassica rapa HOM05D006881 ORTHO05D008423 2.2e-31 139.4 108 69.4
Sopen01g029530 Solanum pennellii HOM05D006881 ORTHO05D008423 2.8e-31 139.0 155 52.9
TWI09G1277 Tripterygium wilfordii HOM05D006881 ORTHO05D008423 4.8e-31 138.3 104 69.2
Migut.G00182 Erythranthe guttata HOM05D006881 ORTHO05D008423 6.3e-31 137.9 111 64.0
Oeu021111.1 Olea europaea HOM05D006881 ORTHO05D008423 1.1e-30 137.1 111 63.1
Os07g0669600 Oryza sativa ssp. japonica HOM05D006881 ORTHO05D008423 1.1e-30 137.1 102 69.6
Zm00001eb330210 Zea mays HOM05D006881 ORTHO05D008423 1.1e-30 137.1 111 65.8
SGA_v2.0_scaffold86G26903 Striga asiatica HOM05D006881 ORTHO05D008423 1.4e-30 136.7 118 64.4
ATR0706G047 Amborella trichopoda HOM05D006881 ORTHO05D008423 2.4e-30 136.0 106 70.8
Sc19g0005040 Simmondsia chinensis HOM05D006881 ORTHO05D008423 4.1e-30 135.2 131 58.0
ECA246G4172 Erigeron canadensis HOM05D006881 ORTHO05D008423 6.9e-30 134.4 110 64.5
Medtr2g437470 Medicago truncatula HOM05D006881 ORTHO05D008423 9.1e-30 134.0 118 61.9
Eucgr.B01283 Eucalyptus grandis HOM05D006881 ORTHO05D008423 2.6e-29 132.5 111 64.0
CDE09G1155 Ceratophyllum demersum HOM05D006881 ORTHO05D008423 5.9e-29 131.3 113 63.7
ClCG05G005980 Citrullus lanatus HOM05D006881 ORTHO05D008423 5.9e-29 131.3 122 61.5
Sed0007304 Sechium edule HOM05D006881 ORTHO05D008423 1.0e-28 130.6 119 60.5
PGR031G0133 Punica granatum HOM05D006881 ORTHO05D008423 1.3e-28 130.2 120 62.5
BolC2t06902H Brassica oleracea HOM05D006881 ORTHO05D008423 2.9e-28 129.0 102 68.6
unitig_748.g8741 Utricularia gibba HOM05D006881 ORTHO05D008423 3.8e-28 128.6 120 60.8
HPP92_025214 Vanilla planifolia HOM05D006881 ORTHO05D008423 3.8e-28 128.6 147 59.9
HPP92_025226 Vanilla planifolia HOM05D006881 ORTHO05D008423 3.8e-28 128.6 147 59.9
Nn3g21363 Nelumbo nucifera HOM05D006881 ORTHO05D008423 6.5e-28 127.9 86 75.6
Hma1.2p1_0698F.1_g205340 Hydrangea macrophylla HOM05D006881 ORTHO05D008423 2.7e-26 122.5 83 77.1
Nitab4.5_0013689g0020 Nicotiana tabacum HOM05D006881 ORTHO05D008423 3.6e-26 122.1 118 59.3
SEGI_11441 Sequoiadendron giganteum HOM05D006881 ORTHO05D008423 3.6e-26 122.1 126 54.0
CSS0034417 Camellia sinensis var. sinensis HOM05D006881 ORTHO05D008423 1.0e-25 120.6 87 71.3
Ah.13g074590 Amaranthus hybridus HOM05D006881 ORTHO05D008423 1.4e-25 120.2 138 52.2
CsaV3_3G014430 Cucumis sativus L. HOM05D006881 ORTHO05D008423 8.8e-25 117.5 122 56.6
MELO3C006643.2 Cucumis melo HOM05D006881 ORTHO05D008423 2.6e-24 115.9 122 55.7
Rhsim02G0011900 Rhododendron simsii HOM05D006881 ORTHO05D008423 2.6e-24 115.9 85 70.6
SHI00284 Sapria himalayana HOM05D006881 ORTHO05D008423 7.4e-24 114.4 85 64.7
SMO367G0816 Selaginella moellendorffii HOM05D006881 ORTHO05D008423 9.7e-24 114.0 134 51.5
BraA10t44166Z Brassica rapa HOM05D006881 ORTHO05D008423 6.3e-23 111.3 119 60.5
Mapoly0010s0048 Marchantia polymorpha HOM05D006881 ORTHO05D008423 2.4e-22 109.4 118 52.5
A10p21020 Brassica napus HOM05D006881 ORTHO05D008423 3.1e-22 109.0 116 57.8
Pp3c15_10020 Physcomitrium patens HOM05D006881 ORTHO05D008423 1.7e-20 103.2 147 46.9
CSS0015929 Camellia sinensis var. sinensis HOM05D006881 ORTHO05D008423 1.6e-18 96.7 131 48.9
TWI73G0635 Tripterygium wilfordii HOM05D006881 ORTHO05D008423 6.1e-18 94.7 84 59.5
CDE02G3907 Ceratophyllum demersum HOM05D006881 ORTHO05D008423 1.1e-16 90.5 91 59.3
Haze_01236 Corylus avellana HOM05D006881 ORTHO05D008423 1.1e-16 90.5 82 62.2
AagrBONN_evm.TU.Sc2ySwM_228.1971 Anthoceros agrestis HOM05D006881 ORTHO05D008423 3.3e-16 89.0 111 51.4
CBR_g46646 Chara braunii HOM05D006881 ORTHO05D008423 1.4e-14 83.6 81 55.6
CSS0002463 Camellia sinensis var. sinensis HOM05D006881 ORTHO05D008423 1.8e-14 83.2 110 48.2
AUR62040384 Chenopodium quinoa HOM05D006881 ORTHO05D008423 3.1e-14 82.4 54 74.1
BcaC04g18670 Brassica carinata HOM05D006881 ORTHO05D008423 7.0e-14 81.3 59 71.2
C09p57950 Brassica napus HOM05D006881 ORTHO05D008423 1.2e-10 70.5 50 66.0
BolC9t58662H Brassica oleracea HOM05D006881 ORTHO05D008423 1.2e-10 70.5 50 66.0
BcaB08g36664 Brassica carinata HOM05D006881 ORTHO05D008423 4.7e-10 68.6 57 63.2


User provided reference genes

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