Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO170G5445 Papaver somniferum HOM05D005868 ORTHO05D006964 6.7e-151 537.3 274 100.0
PSO455G0232 Papaver somniferum HOM05D005868 ORTHO05D006964 8.4e-146 520.4 276 96.7
Aqoxy6G01600 Aquilegia oxysepala HOM05D005868 ORTHO05D006964 4.4e-110 401.7 270 75.9
Aqoxy7G02135 Aquilegia oxysepala HOM05D005868 ORTHO05D006964 4.4e-110 401.7 270 75.9
Nn2g12624 Nelumbo nucifera HOM05D005868 ORTHO05D006964 7.7e-107 391.0 260 75.0
Cpa.g.sc165.3 Carica papaya HOM05D005868 ORTHO05D006964 3.2e-105 385.6 267 72.3
THA.LOC104808997 Tarenaya hassleriana HOM05D005868 ORTHO05D006964 5.5e-105 384.8 270 70.4
QL02p087973 Quercus lobata HOM05D005868 ORTHO05D006964 1.5e-102 376.7 268 70.9
Atru.chr7.1216 Acer truncatum HOM05D005868 ORTHO05D006964 2.0e-102 376.3 257 73.2
Thecc.09G124300 Theobroma cacao HOM05D005868 ORTHO05D006964 2.6e-102 375.9 268 69.8
Duzib150G0047 Durio zibethinus HOM05D005868 ORTHO05D006964 4.4e-102 375.2 268 70.9
Gorai.009G018600 Gossypium raimondii HOM05D005868 ORTHO05D006964 9.8e-102 374.0 268 70.5
CiPaw.06G052800 Carya illinoinensis HOM05D005868 ORTHO05D006964 1.3e-101 373.6 269 71.7
Gohir.A05G017300 Gossypium hirsutum HOM05D005868 ORTHO05D006964 3.7e-101 372.1 246 74.4
Zm00001eb205580 Zea mays HOM05D005868 ORTHO05D006964 3.7e-101 372.1 269 68.8
Lj2A993T36 Lonicera japonica HOM05D005868 ORTHO05D006964 8.3e-101 370.9 242 75.6
vmacro16514 Vaccinium macrocarpon HOM05D005868 ORTHO05D006964 5.4e-100 368.2 245 73.9
Actinidia40461 Actinidia chinensis HOM05D005868 ORTHO05D006964 7.0e-100 367.9 268 69.0
MELO3C004517.2 Cucumis melo HOM05D005868 ORTHO05D006964 1.2e-99 367.1 251 72.1
CAN.G377.18 Capsicum annuum HOM05D005868 ORTHO05D006964 2.0e-99 366.3 249 71.9
Rhsim01G0074500 Rhododendron simsii HOM05D005868 ORTHO05D006964 4.5e-99 365.2 269 68.8
BcaB08g35195 Brassica carinata HOM05D005868 ORTHO05D006964 7.7e-99 364.4 274 67.2
A09p55560 Brassica napus HOM05D005868 ORTHO05D006964 7.7e-99 364.4 274 67.5
BraA09t40958Z Brassica rapa HOM05D005868 ORTHO05D006964 7.7e-99 364.4 274 67.5
CsaV3_2G002760 Cucumis sativus L. HOM05D005868 ORTHO05D006964 7.7e-99 364.4 251 71.7
AL4G17010 Arabidopsis lyrata HOM05D005868 ORTHO05D006964 1.7e-98 363.2 275 66.5
DCAR_009552 Daucus carota HOM05D005868 ORTHO05D006964 1.7e-98 363.2 268 67.5
Prupe.7G240900 Prunus persica HOM05D005868 ORTHO05D006964 2.3e-98 362.8 268 66.8
BcaC07g40857 Brassica carinata HOM05D005868 ORTHO05D006964 3.8e-98 362.1 272 67.3
Solyc12g006670.3 Solanum lycopersicum HOM05D005868 ORTHO05D006964 5.0e-98 361.7 249 71.5
Carub.0004s0528 Capsella rubella HOM05D005868 ORTHO05D006964 6.5e-98 361.3 270 66.7
Sopen12g002620 Solanum pennellii HOM05D005868 ORTHO05D006964 6.5e-98 361.3 249 71.5
C08p38550 Brassica napus HOM05D005868 ORTHO05D006964 8.6e-98 360.9 272 67.3
BolC8t51427H Brassica oleracea HOM05D005868 ORTHO05D006964 8.6e-98 360.9 272 67.3
Gohir.D05G018200 Gossypium hirsutum HOM05D005868 ORTHO05D006964 1.5e-97 360.1 248 72.2
Ciclev10009129m.g Citrus clementina HOM05D005868 ORTHO05D006964 1.9e-97 359.8 270 67.4
PGSC0003DMG402020668 Solanum tuberosum HOM05D005868 ORTHO05D006964 2.5e-97 359.4 249 70.7
HPP92_000663 Vanilla planifolia HOM05D005868 ORTHO05D006964 2.5e-97 359.4 272 67.3
FAN13G1606 Fragaria x ananassa HOM05D001017 ORTHO05D006964 3.2e-97 359.0 249 71.1
MD15G1175100 Malus domestica HOM05D005868 ORTHO05D006964 3.2e-97 359.0 267 67.4
FAN08G1464 Fragaria x ananassa HOM05D005868 ORTHO05D006964 4.2e-97 358.6 249 71.1
FvH4_5g12980 Fragaria vesca HOM05D005868 ORTHO05D006964 5.5e-97 358.2 249 71.1
CSS0026098 Camellia sinensis var. sinensis HOM05D005868 ORTHO05D006964 9.5e-97 357.5 268 67.2
AT2G25570 Arabidopsis thaliana HOM05D005868 ORTHO05D006964 2.1e-96 356.3 276 64.5
Os02g0202600 Oryza sativa ssp. japonica HOM05D005868 ORTHO05D006964 2.1e-96 356.3 259 68.7
Sp4g04970 Schrenkiella parvula HOM05D005868 ORTHO05D006964 2.8e-96 355.9 248 69.4
arahy.Tifrunner.gnm1.ann1.1Z3A91 Arachis hypogaea HOM05D005868 ORTHO05D006964 4.7e-96 355.1 249 70.7
RcHm_v2.0_Chr2g0088741 Rosa chinensis HOM05D005868 ORTHO05D006964 4.7e-96 355.1 268 67.9
Dinv41522 Davidia involucrata HOM05D005868 ORTHO05D006964 1.0e-95 354.0 243 72.0
Eucgr.C04189 Eucalyptus grandis HOM05D005868 ORTHO05D006964 1.0e-95 354.0 270 67.0
RcHm_v2.0_Chr2g0088971 Rosa chinensis HOM05D005868 ORTHO05D006964 1.4e-95 353.6 268 67.5
FAN18G3119 Fragaria x ananassa HOM05D005868 ORTHO05D006964 2.3e-95 352.8 249 70.3
Phvul.003G286500 Phaseolus vulgaris HOM05D005868 ORTHO05D006964 3.0e-95 352.4 269 66.9
HPP92_000683 Vanilla planifolia HOM05D005868 ORTHO05D006964 4.0e-95 352.1 272 65.8
VMungo0251G3516 Vigna mungo HOM05D005868 ORTHO05D006964 5.2e-95 351.7 269 66.9
DCAR_023114 Daucus carota HOM05D005868 ORTHO05D006964 6.8e-95 351.3 285 63.5
Lj3g0005718 Lotus japonicus HOM05D005868 ORTHO05D006964 1.2e-94 350.5 264 66.7
QL93p0150_0012 Quercus lobata HOM05D005868 ORTHO05D006964 4.4e-94 348.6 234 73.1
ECA238G3092 Erigeron canadensis HOM05D005868 ORTHO05D006964 5.7e-94 348.2 268 66.0
ClCG11G002940 Citrullus lanatus HOM05D005868 ORTHO05D006964 9.8e-94 347.4 302 60.9
Sabra16G0124800 Salix brachista HOM05D005868 ORTHO05D006964 9.8e-94 347.4 257 70.8
Aa31LG6G5930 Aethionema arabicum HOM05D005868 ORTHO05D006964 1.3e-93 347.1 288 62.8
Glyma.18G237200 Glycine max HOM05D005868 ORTHO05D006964 2.8e-93 345.9 267 65.2
ATR0322G055 Amborella trichopoda HOM05D005868 ORTHO05D006964 4.9e-93 345.1 253 69.6
Glyma.08G274300 Glycine max HOM05D005868 ORTHO05D006964 4.9e-93 345.1 269 65.1
Lsat_1_v5_gn_2_95580 Lactuca sativa HOM05D005868 ORTHO05D006964 4.9e-93 345.1 268 67.2
Medtr8g073315 Medicago truncatula HOM05D005868 ORTHO05D006964 6.3e-93 344.7 245 69.8
Lalb_Chr12g0197851 Lupinus albus HOM05D005868 ORTHO05D006964 4.1e-92 342.0 268 64.9
MSTRG.20108 Avicennia marina HOM05D005868 ORTHO05D006964 5.4e-92 341.7 251 68.1
Peaxi162Scf00984g00020 Petunia axillaris HOM05D005868 ORTHO05D006964 7.0e-92 341.3 249 68.7
Migut.N02220 Erythranthe guttata HOM05D005868 ORTHO05D006964 3.8e-90 335.5 270 64.1
Manes.07G113800 Manihot esculenta HOM05D005868 ORTHO05D006964 3.8e-90 335.5 273 64.8
HanXRQChr07g0197781 Helianthus annuus HOM05D005868 ORTHO05D006964 1.5e-89 333.6 235 69.4
SHI18654 Sapria himalayana HOM05D005868 ORTHO05D006964 1.5e-89 333.6 263 65.8
TAR383G0149 Trochodendron aralioides HOM05D005868 ORTHO05D006964 1.9e-89 333.2 276 63.8
GSVIVG01015515001 Vitis vinifera HOM05D000032 ORTHO05D001620 3.3e-89 332.4 268 63.4
RcHm_v2.0_Chr2g0089021 Rosa chinensis HOM05D005868 ORTHO05D006964 5.6e-89 331.6 242 69.0
Haze_25605 Corylus avellana HOM05D005868 ORTHO05D006964 7.3e-89 331.3 292 61.6
Nitab4.5_0005139g0020 Nicotiana tabacum HOM05D005868 ORTHO05D006964 3.6e-88 328.9 260 65.0
COL.COLO4_11936 Corchorus olitorius HOM05D005868 ORTHO05D006964 8.0e-88 327.8 267 62.5
unitig_37.g12428 Utricularia gibba HOM05D005868 ORTHO05D006964 2.3e-87 326.2 244 65.6
MD02G1034400 Malus domestica HOM05D005868 ORTHO05D006964 3.0e-87 325.9 268 63.1
Potri.001G219400 Populus trichocarpa HOM05D005868 ORTHO05D006964 1.3e-85 320.5 257 65.8
Cc06_g08680 Coffea canephora HOM05D005868 ORTHO05D006964 1.8e-84 316.6 209 75.1
Sed0015563 Sechium edule HOM05D005868 ORTHO05D006964 4.1e-84 315.5 261 62.8
Medtr0040s0110 Medicago truncatula HOM05D005868 ORTHO05D006964 2.7e-83 312.8 244 64.3
TPR.G21777 Trifolium pratense HOM05D005868 ORTHO05D006964 3.5e-83 312.4 249 64.7
Eucgr.C04191 Eucalyptus grandis HOM05D005868 ORTHO05D006964 2.9e-77 292.7 201 71.1
HanXRQChr14g0452021 Helianthus annuus HOM05D005868 ORTHO05D006964 9.2e-76 287.7 235 64.7
CANSAT35G1449 Cannabis sativa HOM05D005868 ORTHO05D006964 6.6e-74 281.6 269 56.1
Prupe.6G277700 Prunus persica HOM05D005868 ORTHO05D006964 2.1e-72 276.6 268 54.5
SEGI_01723 Sequoiadendron giganteum HOM05D005868 ORTHO05D006964 1.4e-71 273.9 249 56.2
EL10Ac8g18635 Beta vulgaris HOM05D005868 ORTHO05D006964 1.8e-71 273.5 268 58.2
Thhalv10023629m.g Eutrema salsugineum HOM05D005868 ORTHO05D006964 4.0e-71 272.3 189 70.4
CSS0040694 Camellia sinensis var. sinensis HOM05D005868 ORTHO05D006964 5.8e-70 268.5 297 51.2
CAN.G377.12 Capsicum annuum HOM05D005868 ORTHO05D006964 5.8e-70 268.5 249 58.2
CARHR115770 Cardamine hirsuta HOM05D005868 ORTHO05D006964 1.3e-69 267.3 195 68.7
arahy.Tifrunner.gnm1.ann1.T37JIE Arachis hypogaea HOM05D005868 ORTHO05D006964 1.7e-69 266.9 249 57.4
CSS0035520 Camellia sinensis var. sinensis HOM05D005868 ORTHO05D006964 3.7e-69 265.8 297 51.5
TWI32G0760 Tripterygium wilfordii HOM05D005868 ORTHO05D006964 6.6e-66 255.0 272 52.6
PGR102G1613 Punica granatum HOM05D005868 ORTHO05D006964 2.5e-65 253.1 268 51.9
Sc08g0006690 Simmondsia chinensis HOM05D005868 ORTHO05D006964 5.6e-65 251.9 266 53.8
Ca_25916_v3 Cicer arietinum L. HOM05D005868 ORTHO05D006964 3.6e-64 249.2 268 51.9
Ah.09g226020 Amaranthus hybridus HOM05D005868 ORTHO05D006964 8.1e-64 248.1 268 53.0
Hund09137 Selenicereus undatus HOM05D005868 ORTHO05D006964 3.1e-63 246.1 269 52.4
AUR62013373 Chenopodium quinoa HOM05D005868 ORTHO05D006964 6.4e-61 238.4 268 51.9
Nitab4.5_0010819g0020 Nicotiana tabacum HOM05D005868 ORTHO05D006964 4.1e-60 235.7 162 72.8
SGA_v2.0_scaffold120G32883 Striga asiatica HOM05D005868 ORTHO05D006964 3.5e-59 232.6 244 51.6
Nitab4.5_0002556g0090 Nicotiana tabacum HOM05D005868 ORTHO05D006964 1.2e-54 217.6 152 71.7
vmacro20542 Vaccinium macrocarpon HOM05D005868 ORTHO05D006964 1.7e-53 213.8 314 46.5
MBI04_g07645_MAGBIO Magnolia biondii HOM05D005868 ORTHO05D006964 3.2e-52 209.5 168 66.7
CDE04G0864 Ceratophyllum demersum HOM05D005868 ORTHO05D006964 3.0e-50 203.0 219 49.8
Mapoly0058s0058 Marchantia polymorpha HOM05D005868 ORTHO05D006964 1.9e-49 200.3 256 44.1
SalBow5G0777 Salvia bowleyana HOM05D005868 ORTHO05D006964 3.6e-48 196.1 295 40.7
AUR62033475 Chenopodium quinoa HOM05D005868 ORTHO05D006964 2.6e-46 189.9 234 47.4
Pp3c21_8470 Physcomitrium patens HOM05D005868 ORTHO05D006964 1.9e-41 173.7 272 40.1
FAN23G1471 Fragaria x ananassa HOM05D005868 ORTHO05D006964 5.5e-36 155.6 122 66.4
Eucgr.C03944 Eucalyptus grandis HOM05D005868 ORTHO05D006964 5.6e-33 145.6 110 63.6
RcHm_v2.0_Chr2g0088921 Rosa chinensis HOM05D005868 ORTHO05D006964 3.8e-29 132.9 152 50.0
RcHm_v2.0_Chr2g0088781 Rosa chinensis HOM05D005868 ORTHO05D006964 1.4e-28 131.0 85 71.8
FvH4_1g05000 Fragaria vesca HOM05D005868 ORTHO05D006964 1.5e-25 120.9 76 77.6
RcHm_v2.0_Chr2g0088941 Rosa chinensis HOM05D005868 ORTHO05D006964 5.9e-22 109.0 131 46.6
RcHm_v2.0_Chr2g0088761 Rosa chinensis HOM05D005868 ORTHO05D006964 1.9e-20 104.0 91 56.0
CARHR115780 Cardamine hirsuta HOM05D005868 ORTHO05D006964 1.5e-17 94.4 81 56.8
CBR_g783 Chara braunii HOM05D005868 ORTHO05D006964 1.3e-16 91.3 185 35.1
MBI04_g07643_MAGBIO Magnolia biondii HOM05D005868 ORTHO05D006964 7.2e-12 75.5 39 82.1
RcHm_v2.0_Chr3g0491871 Rosa chinensis HOM05D005868 ORTHO05D006964 5.1e-10 69.3 79 46.8
Eucgr.L03701 Eucalyptus grandis HOM05D005868 ORTHO05D006964 1.5e-09 67.8 71 54.9
RcHm_v2.0_Chr2g0088771 Rosa chinensis HOM05D005868 ORTHO05D006964 4.4e-09 66.2 37 83.8
RcHm_v2.0_Chr2g0088931 Rosa chinensis HOM05D005868 ORTHO05D006964 4.4e-09 66.2 37 83.8
Psat7g152720 Pisum sativum HOM05D005868 ORTHO05D006964 3.4e-06 56.6 66 48.5


User provided reference genes

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