Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO170G5428 Papaver somniferum HOM05D005957 ORTHO05D007318 7.7e-142 507.3 284 100.0
PSO017G7297 Papaver somniferum HOM05D005957 ORTHO05D007318 2.8e-136 488.8 284 96.8
TAR623G0423 Trochodendron aralioides HOM05D005957 ORTHO05D007318 1.4e-31 141.0 113 62.8
Hma1.2p1_0119F.1_g056870 Hydrangea macrophylla HOM05D005957 ORTHO05D007318 4.2e-31 139.4 113 60.2
Potri.013G155300 Populus trichocarpa HOM05D005957 ORTHO05D007318 4.2e-31 139.4 111 63.1
COL.COLO4_11196 Corchorus olitorius HOM05D005957 ORTHO05D007318 9.3e-31 138.3 113 63.7
Duzib168G0649 Durio zibethinus HOM05D005957 ORTHO05D007318 9.3e-31 138.3 170 47.6
Manes.18G139500 Manihot esculenta HOM05D005957 ORTHO05D007318 9.3e-31 138.3 118 61.9
Peaxi162Scf01692g00003 Petunia axillaris HOM05D005957 ORTHO05D007318 9.3e-31 138.3 110 62.7
Thecc.09G362300 Theobroma cacao HOM05D005957 ORTHO05D007318 1.6e-30 137.5 112 65.2
Atru.chr1.2524 Acer truncatum HOM05D005957 ORTHO05D007318 2.1e-30 137.1 170 47.6
Haze_24453 Corylus avellana HOM05D005957 ORTHO05D007318 4.6e-30 136.0 182 46.7
Potri.019G128400 Populus trichocarpa HOM05D005957 ORTHO05D007318 6.1e-30 135.6 171 48.5
Cfa011817 Carpinus fangiana HOM05D005957 ORTHO05D007318 7.9e-30 135.2 183 46.4
Nitab4.5_0007927g0010 Nicotiana tabacum HOM05D005957 ORTHO05D007318 1.0e-29 134.8 168 47.6
Peaxi162Scf00390g00049 Petunia axillaris HOM05D005957 ORTHO05D007318 1.0e-29 134.8 110 61.8
Sabra19G0126000 Salix brachista HOM05D005957 ORTHO05D007318 1.0e-29 134.8 171 48.5
Nitab4.5_0002091g0020 Nicotiana tabacum HOM05D005957 ORTHO05D007318 1.3e-29 134.4 176 46.0
Sabra13G0125100 Salix brachista HOM05D005957 ORTHO05D007318 1.8e-29 134.0 111 62.2
PGSC0003DMG400046061 Solanum tuberosum HOM05D005957 ORTHO05D007318 3.0e-29 133.3 110 62.7
Nitab4.5_0000002g0080 Nicotiana tabacum HOM05D005957 ORTHO05D007318 3.9e-29 132.9 110 61.8
Psat2g052120 Pisum sativum HOM05D005957 ORTHO05D007318 3.9e-29 132.9 114 57.9
Cpa.g.sc2.317 Carica papaya HOM05D005957 ORTHO05D007318 6.7e-29 132.1 109 62.4
TPR.G25771 Trifolium pratense HOM05D005957 ORTHO05D007318 1.5e-28 131.0 98 64.3
GSVIVG01024580001 Vitis vinifera HOM05D005957 ORTHO05D007318 1.9e-28 130.6 113 59.3
Dinv04837 Davidia involucrata HOM05D005957 ORTHO05D007318 4.3e-28 129.4 93 66.7
Cc01_g15210 Coffea canephora HOM05D005957 ORTHO05D007318 7.4e-28 128.6 113 59.3
QL01p025125 Quercus lobata HOM05D005957 ORTHO05D007318 7.4e-28 128.6 178 43.3
CiPaw.14G051700 Carya illinoinensis HOM05D005957 ORTHO05D007318 1.3e-27 127.9 178 43.8
Solyc01g090870.1 Solanum lycopersicum HOM05D005957 ORTHO05D007318 1.3e-27 127.9 110 60.0
Sopen01g036610 Solanum pennellii HOM05D005957 ORTHO05D007318 1.3e-27 127.9 110 60.0
Sopen06g033830 Solanum pennellii HOM05D005957 ORTHO05D007318 1.6e-27 127.5 89 66.3
LjContig00141g0008224 Lotus japonicus HOM05D005957 ORTHO05D007318 2.2e-27 127.1 95 66.3
Solyc06g082450.1 Solanum lycopersicum HOM05D005957 ORTHO05D007318 2.8e-27 126.7 89 66.3
Ah.08g217120 Amaranthus hybridus HOM05D005957 ORTHO05D007318 4.8e-27 125.9 252 37.7
CANSAT54G0691 Cannabis sativa HOM05D005957 ORTHO05D007318 4.8e-27 125.9 99 62.6
CiPaw.13G065100 Carya illinoinensis HOM05D005957 ORTHO05D007318 6.3e-27 125.6 223 38.6
Glyma.14G203500 Glycine max HOM05D005957 ORTHO05D007318 8.2e-27 125.2 171 44.4
Nn5g26879 Nelumbo nucifera HOM05D005957 ORTHO05D007318 8.2e-27 125.2 114 60.5
Medtr5g075190 Medicago truncatula HOM05D005957 ORTHO05D007318 1.4e-26 124.4 114 55.3
CSS0038993 Camellia sinensis var. sinensis HOM05D005957 ORTHO05D007318 1.8e-26 124.0 94 64.9
Glyma.02G235500 Glycine max HOM05D005957 ORTHO05D007318 2.4e-26 123.6 98 62.2
Gohir.D05G134050 Gossypium hirsutum HOM05D005957 ORTHO05D007318 2.4e-26 123.6 115 59.1
Lsat_1_v5_gn_0_40840 Lactuca sativa HOM05D005957 ORTHO05D007318 2.4e-26 123.6 111 55.0
CAN.G1872.4 Capsicum annuum HOM05D005957 ORTHO05D007318 3.1e-26 123.2 110 58.2
ECA236G1285 Erigeron canadensis HOM05D005957 ORTHO05D007318 4.1e-26 122.9 117 55.6
TWI79G1455 Tripterygium wilfordii HOM05D005957 ORTHO05D007318 5.3e-26 122.5 112 58.0
MBI03_g02190_MAGBIO Magnolia biondii HOM05D005957 ORTHO05D007318 6.9e-26 122.1 96 63.5
Migut.D00827 Erythranthe guttata HOM05D005957 ORTHO05D007318 9.0e-26 121.7 112 54.5
Ca_05700_v3 Cicer arietinum L. HOM05D005957 ORTHO05D007318 1.2e-25 121.3 111 55.0
Ca_30026_v3 Cicer arietinum L. HOM05D005957 ORTHO05D007318 1.2e-25 121.3 111 55.0
Gohir.A05G129400 Gossypium hirsutum HOM05D005957 ORTHO05D007318 1.2e-25 121.3 182 44.5
VMungo0647G0754 Vigna mungo HOM05D005957 ORTHO05D007318 1.5e-25 120.9 94 63.8
Gorai.009G137600 Gossypium raimondii HOM05D005957 ORTHO05D007318 2.0e-25 120.6 183 44.3
Aqoxy2G00718 Aquilegia oxysepala HOM05D005957 ORTHO05D007318 2.6e-25 120.2 204 39.7
EL10Ac7g16454 Beta vulgaris HOM05D005957 ORTHO05D007318 2.6e-25 120.2 239 34.7
Phvul.008G248400 Phaseolus vulgaris HOM05D005957 ORTHO05D007318 2.6e-25 120.2 111 56.8
Ciclev10003853m.g Citrus clementina HOM05D005957 ORTHO05D007318 4.5e-25 119.4 93 62.4
Migut.N00743 Erythranthe guttata HOM05D005957 ORTHO05D007318 4.5e-25 119.4 115 54.8
FvH4_3g40300 Fragaria vesca HOM05D005957 ORTHO05D007318 4.5e-25 119.4 95 64.2
FAN11G2330 Fragaria x ananassa HOM05D005957 ORTHO05D007318 4.5e-25 119.4 95 64.2
FAN16G3236 Fragaria x ananassa HOM05D005957 ORTHO05D007318 4.5e-25 119.4 95 64.2
FAN21G1009 Fragaria x ananassa HOM05D005957 ORTHO05D007318 4.5e-25 119.4 95 64.2
FAN25G1085 Fragaria x ananassa HOM05D005957 ORTHO05D007318 5.9e-25 119.0 94 66.0
Nitab4.5_0002759g0020 Nicotiana tabacum HOM05D005957 ORTHO05D007318 5.9e-25 119.0 83 69.9
Oeu064677.1 Olea europaea HOM05D005957 ORTHO05D007318 5.9e-25 119.0 169 42.6
RcHm_v2.0_Chr5g0072641 Rosa chinensis HOM05D005957 ORTHO05D007318 1.3e-24 117.9 94 63.8
Sed0019639 Sechium edule HOM05D005957 ORTHO05D007318 1.3e-24 117.9 113 53.1
SGA_v2.0_scaffold77G25368 Striga asiatica HOM05D005957 ORTHO05D007318 1.3e-24 117.9 112 55.4
Oeu011373.1 Olea europaea HOM05D005957 ORTHO05D007318 6.5e-24 115.5 109 53.2
CsaV3_6G019090 Cucumis sativus L. HOM05D005957 ORTHO05D007318 1.1e-23 114.8 116 53.4
Lalb_Chr17g0345591 Lupinus albus HOM05D005957 ORTHO05D007318 1.9e-23 114.0 94 58.5
MD11G1055300 Malus domestica HOM05D005957 ORTHO05D007318 1.9e-23 114.0 110 53.6
ATR0681G143 Amborella trichopoda HOM05D005957 ORTHO05D007318 3.2e-23 113.2 110 54.5
Rhsim13G0060900 Rhododendron simsii HOM05D005957 ORTHO05D007318 4.2e-23 112.8 95 60.0
Aa31LG5G6330 Aethionema arabicum HOM05D005957 ORTHO05D007318 5.5e-23 112.5 97 55.7
MSTRG.17909 Avicennia marina HOM05D005957 ORTHO05D007318 5.5e-23 112.5 90 61.1
Carub.0004s1155 Capsella rubella HOM05D005957 ORTHO05D007318 7.2e-23 112.1 97 55.7
ClCG02G019100 Citrullus lanatus HOM05D005957 ORTHO05D007318 7.2e-23 112.1 98 58.2
HanXRQChr01g0028631 Helianthus annuus HOM05D005957 ORTHO05D007318 9.4e-23 111.7 174 42.0
CARHR123750 Cardamine hirsuta HOM05D005957 ORTHO05D007318 1.2e-22 111.3 97 55.7
Eucgr.J01842 Eucalyptus grandis HOM05D005957 ORTHO05D007318 1.6e-22 110.9 117 50.4
MD03G1053700 Malus domestica HOM05D005957 ORTHO05D007318 1.6e-22 110.9 110 55.5
Prupe.6G042800 Prunus persica HOM05D005957 ORTHO05D007318 2.1e-22 110.5 89 59.6
vmacro02888 Vaccinium macrocarpon HOM05D005957 ORTHO05D007318 2.1e-22 110.5 98 56.1
MELO3C026874.2 Cucumis melo HOM05D005957 ORTHO05D007318 2.7e-22 110.2 111 53.2
AT2G30395 Arabidopsis thaliana HOM05D005957 ORTHO05D007318 7.9e-22 108.6 96 53.1
SalBow6G3501 Salvia bowleyana HOM05D005957 ORTHO05D007318 7.9e-22 108.6 98 58.2
Phvul.006G076900 Phaseolus vulgaris HOM05D005957 ORTHO05D007318 1.0e-21 108.2 100 54.0
AL4G25260 Arabidopsis lyrata HOM05D005957 ORTHO05D007318 1.8e-21 107.5 96 53.1
BcaC02g11133 Brassica carinata HOM05D005957 ORTHO05D007318 1.8e-21 107.5 97 53.6
HanXRQChr17g0565391 Helianthus annuus HOM05D005957 ORTHO05D007318 2.3e-21 107.1 115 50.4
A05p15090 Brassica napus HOM05D005957 ORTHO05D007318 3.9e-21 106.3 97 52.6
BolC4t23551H Brassica oleracea HOM05D005957 ORTHO05D007318 3.9e-21 106.3 97 52.6
THA.LOC104800785 Tarenaya hassleriana HOM05D005957 ORTHO05D007318 3.9e-21 106.3 95 50.5
C04p20120 Brassica napus HOM05D005957 ORTHO05D007318 5.1e-21 105.9 97 52.6
DCAR_023195 Daucus carota HOM05D005957 ORTHO05D007318 5.1e-21 105.9 74 64.9
Sp4g12950 Schrenkiella parvula HOM05D005957 ORTHO05D007318 5.1e-21 105.9 97 51.5
Thhalv10017867m.g Eutrema salsugineum HOM05D005957 ORTHO05D007318 6.7e-21 105.5 97 53.6
PGR119G2032 Punica granatum HOM05D005957 ORTHO05D007318 2.0e-20 104.0 91 57.1
BcaB02g10322 Brassica carinata HOM05D005957 ORTHO05D007318 1.3e-19 101.3 117 47.0
Dinv28722 Davidia involucrata HOM05D005957 ORTHO05D007318 1.3e-19 101.3 75 64.0
BraA04t17844Z Brassica rapa HOM05D005957 ORTHO05D007318 1.7e-19 100.9 97 53.6
BraA05t20430Z Brassica rapa HOM05D005957 ORTHO05D007318 1.7e-19 100.9 96 52.1
Ah.15g095100 Amaranthus hybridus HOM05D005957 ORTHO05D007318 2.8e-19 100.1 92 51.1
Thhalv10017852m.g Eutrema salsugineum HOM05D005957 ORTHO05D007318 6.3e-19 99.0 97 52.6
A04p23170 Brassica napus HOM05D005957 ORTHO05D007318 8.2e-19 98.6 97 52.6
Sc21g0004870 Simmondsia chinensis HOM05D005957 ORTHO05D007318 1.8e-18 97.4 103 48.5
BcaB06g28364 Brassica carinata HOM05D005957 ORTHO05D007318 4.1e-18 96.3 97 48.5
Dinv12270 Davidia involucrata HOM05D005957 ORTHO05D007318 4.1e-18 96.3 75 62.7
BcaC02g08022 Brassica carinata HOM05D005957 ORTHO05D007318 6.9e-18 95.5 97 51.5
C04p59320 Brassica napus HOM05D005957 ORTHO05D007318 6.9e-18 95.5 97 51.5
BolC4t27440H Brassica oleracea HOM05D005957 ORTHO05D007318 6.9e-18 95.5 97 51.5
Carub.0001s0622 Capsella rubella HOM05D005957 ORTHO05D007318 2.0e-17 94.0 63 61.9
Os07g0679100 Oryza sativa ssp. japonica HOM05D005957 ORTHO05D007318 2.0e-17 94.0 70 61.4
CARHR006600 Cardamine hirsuta HOM05D005957 ORTHO05D007318 3.4e-17 93.2 94 46.8
Thhalv10009633m.g Eutrema salsugineum HOM05D005957 ORTHO05D007318 3.4e-17 93.2 102 43.1
Os05g0328300 Oryza sativa ssp. japonica HOM05D005957 ORTHO05D007318 4.5e-17 92.8 83 53.0
BcaC07g42550 Brassica carinata HOM05D005957 ORTHO05D007318 2.2e-16 90.5 65 61.5
Sp1g05630 Schrenkiella parvula HOM05D005957 ORTHO05D007318 2.9e-16 90.1 95 45.3
AL1G16950 Arabidopsis lyrata HOM05D005957 ORTHO05D007318 3.8e-16 89.7 106 40.6
AT1G06923 Arabidopsis thaliana HOM05D005957 ORTHO05D007318 5.0e-16 89.4 96 43.8
AUR62007156 Chenopodium quinoa HOM05D003140 ORTHO05D003851 5.0e-16 89.4 109 42.2
Zm00001eb330630 Zea mays HOM05D005957 ORTHO05D007318 6.5e-16 89.0 69 58.0
Zm00001eb350230 Zea mays HOM05D005957 ORTHO05D007318 1.9e-15 87.4 56 71.4
A09p66670 Brassica napus HOM05D005957 ORTHO05D007318 2.5e-15 87.0 62 59.7
BraA09t42007Z Brassica rapa HOM05D005957 ORTHO05D007318 2.5e-15 87.0 62 59.7
BcaC07g42036 Brassica carinata HOM05D005957 ORTHO05D007318 1.2e-14 84.7 63 57.1
BcaC07g42037 Brassica carinata HOM05D005957 ORTHO05D007318 1.2e-14 84.7 63 57.1
C08p50900 Brassica napus HOM05D005957 ORTHO05D007318 1.2e-14 84.7 63 57.1
BolC8t52618H Brassica oleracea HOM05D005957 ORTHO05D007318 1.2e-14 84.7 63 57.1


User provided reference genes

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