Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO170G5361 Papaver somniferum HOM05D006698 ORTHO05D008415 0.0e+00 1100.9 540 100.0
PSO210G5790 Papaver somniferum HOM05D006698 ORTHO05D008415 0.0e+00 1078.2 540 98.1
PSO210G1198 Papaver somniferum HOM05D006698 ORTHO05D008415 8.4e-214 747.3 549 67.0
PSO170G6283 Papaver somniferum HOM05D006698 ORTHO05D008415 9.2e-213 743.8 549 66.7
TAR628G0086 Trochodendron aralioides HOM05D006698 ORTHO05D008415 1.3e-203 713.4 542 64.4
Aqoxy5G01450 Aquilegia oxysepala HOM05D006698 ORTHO05D008415 3.2e-197 692.2 542 62.9
Nn6g32301 Nelumbo nucifera HOM05D006698 ORTHO05D008415 2.8e-193 679.1 541 61.6
GSVIVG01009862001 Vitis vinifera HOM05D006698 ORTHO05D008415 1.4e-192 676.8 541 59.9
Thecc.08G041000 Theobroma cacao HOM05D006698 ORTHO05D008415 4.0e-184 648.7 542 57.9
CiPaw.09G133200 Carya illinoinensis HOM05D006698 ORTHO05D008415 6.9e-184 647.9 542 57.7
Ciclev10000799m.g Citrus clementina HOM05D006698 ORTHO05D008415 9.0e-184 647.5 542 57.7
CSS0038613 Camellia sinensis var. sinensis HOM05D006698 ORTHO05D008415 2.0e-183 646.4 541 59.3
Cfa013924 Carpinus fangiana HOM05D006698 ORTHO05D008415 2.6e-183 646.0 543 57.5
Duzib093G0690 Durio zibethinus HOM05D006698 ORTHO05D008415 3.4e-183 645.6 542 58.9
Haze_22605 Corylus avellana HOM05D006698 ORTHO05D008415 5.8e-183 644.8 568 55.5
Gorai.002G124600 Gossypium raimondii HOM05D006698 ORTHO05D008415 1.0e-182 644.0 542 57.6
QL02p011012 Quercus lobata HOM05D006698 ORTHO05D008415 3.8e-182 642.1 544 57.7
Lj4A795T33 Lonicera japonica HOM05D006698 ORTHO05D008415 6.5e-182 641.3 540 58.3
TWI12G1415 Tripterygium wilfordii HOM05D006698 ORTHO05D008415 5.5e-181 638.3 542 56.6
Gohir.D01G099300 Gossypium hirsutum HOM05D006698 ORTHO05D008415 1.2e-180 637.1 542 57.0
Gohir.A01G112500 Gossypium hirsutum HOM05D006698 ORTHO05D008415 6.0e-180 634.8 542 57.2
Rhsim06G0023700 Rhododendron simsii HOM05D006698 ORTHO05D008415 6.0e-180 634.8 542 57.9
THA.LOC104823101 Tarenaya hassleriana HOM05D006698 ORTHO05D008415 5.7e-178 628.2 541 55.1
MBI09_g13764_MAGBIO Magnolia biondii HOM05D006698 ORTHO05D008415 1.6e-177 626.7 546 59.7
MD09G1232000 Malus domestica HOM05D006698 ORTHO05D008415 2.2e-177 626.3 546 56.6
PGSC0003DMG400003770 Solanum tuberosum HOM05D006698 ORTHO05D008415 4.1e-176 622.1 540 57.4
Prupe.1G368700 Prunus persica HOM05D006698 ORTHO05D008415 1.2e-175 620.5 543 55.8
CAN.G1271.13 Capsicum annuum HOM05D006698 ORTHO05D008415 2.6e-175 619.4 540 57.8
Cpa.g.sc14.105 Carica papaya HOM05D006698 ORTHO05D008415 4.5e-175 618.6 545 55.8
Glyma.04G215400 Glycine max HOM05D006698 ORTHO05D008415 4.5e-175 618.6 542 55.5
Potri.005G236400 Populus trichocarpa HOM05D006698 ORTHO05D008415 2.9e-174 615.9 543 54.5
Oeu027550.1 Olea europaea HOM05D006698 ORTHO05D008415 3.8e-174 615.5 543 56.0
Sabra05G0182800 Salix brachista HOM05D006698 ORTHO05D008415 4.2e-173 612.1 543 54.9
Sopen04g034840 Solanum pennellii HOM05D006698 ORTHO05D008415 4.2e-173 612.1 540 56.5
Lj1g0011928 Lotus japonicus HOM05D006698 ORTHO05D008415 3.6e-172 609.0 548 55.7
MELO3C003770.2 Cucumis melo HOM05D006698 ORTHO05D008415 4.6e-172 608.6 543 54.9
Sed0002694 Sechium edule HOM05D006698 ORTHO05D008415 4.6e-172 608.6 543 54.9
Solyc04g081230.3 Solanum lycopersicum HOM05D006698 ORTHO05D008415 1.0e-171 607.4 540 56.3
A04p12330 Brassica napus HOM05D006698 ORTHO05D008415 1.3e-171 607.1 543 54.0
Peaxi162Scf00287g01719 Petunia axillaris HOM05D006698 ORTHO05D008415 1.8e-171 606.7 543 57.6
BraA04t16897Z Brassica rapa HOM05D006698 ORTHO05D008415 3.0e-171 605.9 543 54.1
Eucgr.F01632 Eucalyptus grandis HOM05D006698 ORTHO05D008415 3.0e-171 605.9 543 53.6
arahy.Tifrunner.gnm1.ann1.32JQZQ Arachis hypogaea HOM05D006698 ORTHO05D008415 6.7e-171 604.7 542 54.8
AT5G39590 Arabidopsis thaliana HOM05D006698 ORTHO05D008415 1.1e-170 604.0 545 53.8
arahy.Tifrunner.gnm1.ann1.HU0S2W Arachis hypogaea HOM05D006698 ORTHO05D008415 1.5e-170 603.6 542 54.8
CsaV3_3G045670 Cucumis sativus L. HOM05D006698 ORTHO05D008415 3.3e-170 602.4 543 53.6
RcHm_v2.0_Chr6g0302501 Rosa chinensis HOM05D006698 ORTHO05D008415 3.3e-170 602.4 544 54.8
SGA_v2.0_scaffold47G17495 Striga asiatica HOM05D006698 ORTHO05D008415 4.3e-170 602.1 545 56.3
Carub.0007s3635 Capsella rubella HOM05D006698 ORTHO05D008415 5.7e-170 601.7 545 53.9
Migut.N03146 Erythranthe guttata HOM05D006698 ORTHO05D008415 1.3e-169 600.5 543 56.5
BolC4t26182H Brassica oleracea HOM05D006698 ORTHO05D008415 2.8e-169 599.4 543 53.6
vmacro21711 Vaccinium macrocarpon HOM05D006698 ORTHO05D008415 2.8e-169 599.4 564 53.9
MSTRG.22331 Avicennia marina HOM05D006698 ORTHO05D008415 5.3e-168 595.1 546 56.6
C04p46000 Brassica napus HOM05D006698 ORTHO05D008415 6.9e-168 594.7 543 53.4
FAN27G1564 Fragaria x ananassa HOM05D006698 ORTHO05D008415 1.5e-167 593.6 543 53.8
CANSAT35G1394 Cannabis sativa HOM05D006698 ORTHO05D008415 2.0e-167 593.2 543 54.1
Ca_16921_v3 Cicer arietinum L. HOM05D006698 ORTHO05D008415 2.0e-167 593.2 543 53.2
AL7G50720 Arabidopsis lyrata HOM05D006698 ORTHO05D008415 3.4e-167 592.4 545 52.8
CARHR262700 Cardamine hirsuta HOM05D006698 ORTHO05D008415 2.2e-166 589.7 544 52.8
ECA238G1455 Erigeron canadensis HOM05D006698 ORTHO05D008415 2.2e-166 589.7 537 54.4
AUR62035724 Chenopodium quinoa HOM05D006698 ORTHO05D008415 3.8e-166 589.0 544 52.6
FAN15G2932 Fragaria x ananassa HOM05D006698 ORTHO05D008415 8.5e-166 587.8 543 53.0
Nitab4.5_0001988g0020 Nicotiana tabacum HOM05D006698 ORTHO05D008415 1.4e-165 587.0 491 59.5
Sp7g02400 Schrenkiella parvula HOM05D006698 ORTHO05D008415 1.4e-165 587.0 543 52.3
Phvul.009G147800 Phaseolus vulgaris HOM05D006698 ORTHO05D008415 3.2e-165 585.9 542 53.5
Lalb_Chr08g0238541 Lupinus albus HOM05D006698 ORTHO05D008415 4.2e-165 585.5 541 53.8
FvH4_2g38790 Fragaria vesca HOM05D006698 ORTHO05D008415 1.2e-164 583.9 544 52.9
TPR.G18731 Trifolium pratense HOM05D006698 ORTHO05D008415 1.6e-164 583.6 542 51.3
Aa31LG9G16490 Aethionema arabicum HOM05D006698 ORTHO05D008415 3.6e-164 582.4 574 51.0
Hund24100 Selenicereus undatus HOM05D006698 ORTHO05D008415 6.1e-164 581.6 543 53.6
VMungo1309G0200 Vigna mungo HOM05D006698 ORTHO05D008415 7.9e-164 581.3 542 53.1
HanXRQChr04g0101141 Helianthus annuus HOM05D006698 ORTHO05D008415 5.1e-163 578.6 540 53.3
EL10Ac1g02260 Beta vulgaris HOM05D006698 ORTHO05D008415 1.1e-162 577.4 539 51.8
DCAR_009935 Daucus carota HOM05D006698 ORTHO05D008415 9.7e-162 574.3 541 53.4
Atru.chr13.326 Acer truncatum HOM05D006698 ORTHO05D008415 1.3e-161 573.9 471 58.6
Cc10_g01920 Coffea canephora HOM05D006698 ORTHO05D008415 1.3e-161 573.9 602 51.0
Lsat_1_v5_gn_2_11660 Lactuca sativa HOM05D006698 ORTHO05D008415 4.1e-160 568.9 539 51.6
PGR083G1075 Punica granatum HOM05D006698 ORTHO05D008415 5.0e-158 562.0 547 51.2
Ah.11g039450 Amaranthus hybridus HOM05D006698 ORTHO05D008415 6.5e-158 561.6 542 52.0
Oeu027551.1 Olea europaea HOM05D006698 ORTHO05D008415 3.2e-157 559.3 497 54.7
Medtr3g095660 Medicago truncatula HOM05D006698 ORTHO05D008415 1.6e-156 557.0 541 51.0
Thhalv10027724m.g Eutrema salsugineum HOM05D006698 ORTHO05D008415 8.0e-156 554.7 543 51.6
FAN20G0171 Fragaria x ananassa HOM05D006698 ORTHO05D008415 5.0e-150 535.4 634 45.3
ClCG05G018510 Citrullus lanatus HOM05D006698 ORTHO05D008415 1.1e-149 534.3 542 48.9
BcaB06g27346 Brassica carinata HOM05D006698 ORTHO05D008415 5.5e-149 531.9 542 49.4
SalBow8G5338 Salvia bowleyana HOM05D006698 ORTHO05D008415 4.0e-147 525.8 592 48.0
HPP92_014935 Vanilla planifolia HOM05D006698 ORTHO05D008415 7.5e-146 521.5 545 49.5
AUR62035437 Chenopodium quinoa HOM05D006698 ORTHO05D008415 5.3e-144 515.4 461 52.5
SHI08084 Sapria himalayana HOM05D006698 ORTHO05D008415 5.3e-144 515.4 561 49.2
CDE09G0091 Ceratophyllum demersum HOM05D006698 ORTHO05D008415 5.0e-142 508.8 491 54.0
Manes.18G015700 Manihot esculenta HOM05D006698 ORTHO05D008415 5.0e-142 508.8 428 57.2
Actinidia16966 Actinidia chinensis HOM05D006698 ORTHO05D008415 7.5e-138 495.0 449 55.7
ATR0147G003 Amborella trichopoda HOM05D006698 ORTHO05D008415 5.9e-135 485.3 552 47.5
Os04g0663700 Oryza sativa ssp. japonica HOM05D006698 ORTHO05D008415 5.9e-135 485.3 553 48.6
Dinv31825 Davidia involucrata HOM05D006698 ORTHO05D008415 7.7e-135 485.0 541 49.4
Zm00001eb067290 Zea mays HOM05D006698 ORTHO05D008415 1.5e-133 480.7 560 47.3
Psat5g063280 Pisum sativum HOM05D006698 ORTHO05D008415 2.1e-132 476.9 467 50.1
SEGI_26467 Sequoiadendron giganteum HOM05D006698 ORTHO05D008415 4.7e-116 422.5 506 46.2
Potri.002G025032 Populus trichocarpa HOM05D006698 ORTHO05D008415 3.5e-103 379.8 314 57.6
Sc15g0005110 Simmondsia chinensis HOM05D006698 ORTHO05D008415 1.0e-102 378.3 401 46.9
Pp3c16_7090 Physcomitrium patens HOM05D006698 ORTHO05D008415 1.9e-93 347.4 556 35.8
AagrBONN_evm.TU.Sc2ySwM_344.812 Anthoceros agrestis HOM05D006698 ORTHO05D008415 6.4e-89 332.4 574 38.7
Pp3c5_11350 Physcomitrium patens HOM05D006698 ORTHO05D008415 3.2e-88 330.1 560 36.2
AagrBONN_evm.TU.Sc2ySwM_344.842 Anthoceros agrestis HOM05D006698 ORTHO05D008415 7.8e-87 325.5 567 38.3
Mapoly0043s0042 Marchantia polymorpha HOM05D006698 ORTHO05D008415 1.5e-82 311.2 573 34.7
SMO145G0265 Selaginella moellendorffii HOM05D006698 ORTHO05D008415 1.1e-77 295.0 491 38.1
unitig_27.g25099 Utricularia gibba HOM05D006698 ORTHO05D008415 4.9e-73 279.6 223 61.4
Glyma.06G150801 Glycine max HOM05D006698 ORTHO05D008415 2.2e-60 237.7 208 55.3
unitig_27.g25098 Utricularia gibba HOM05D006698 ORTHO05D008415 4.3e-53 213.4 250 45.6
Potri.002G024966 Populus trichocarpa HOM05D006698 ORTHO05D008415 5.0e-49 199.9 174 56.3
QL03p018220 Quercus lobata HOM05D006698 ORTHO05D008415 3.0e-38 164.1 108 67.6
QL03p018243 Quercus lobata HOM05D006698 ORTHO05D008415 3.5e-26 124.0 196 37.8
HanXRQChr05g0147331 Helianthus annuus HOM05D006698 ORTHO05D008415 5.5e-24 116.7 112 46.4
Actinidia16965 Actinidia chinensis HOM05D006698 ORTHO05D008415 4.0e-22 110.5 76 68.4
Medtr7g098720 Medicago truncatula HOM05D006698 ORTHO05D008415 5.7e-21 106.7 125 41.6
Oeu046256.1 Olea europaea HOM05D006698 ORTHO05D008415 8.0e-15 86.3 53 64.2
Cpa.g.sc14.104 Carica papaya HOM05D006698 ORTHO05D008415 1.5e-13 82.0 118 39.0
MBI06_g37498_MAGBIO Magnolia biondii HOM05D002910 ORTHO05D030039 1.2e-07 62.4 85 38.8
ATR0370G001 Amborella trichopoda HOM05D006698 ORTHO05D008415 3.6e-07 60.8 51 58.8
Duzib116G0861 Durio zibethinus HOM05D006698 ORTHO05D008415 3.1e-06 57.8 44 59.1
ATR0772G016 Amborella trichopoda HOM05D006431 ORTHO05D007918 5.2e-06 57.0 165 27.3


User provided reference genes

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