Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO170G5167 Papaver somniferum HOM05D007420 ORTHO05D009353 2.5e-27 125.2 63 100.0
TWI32G1185 Tripterygium wilfordii HOM05D007420 ORTHO05D009353 4.2e-22 107.8 61 82.0
Atru.chr7.1239 Acer truncatum HOM05D007420 ORTHO05D009353 3.5e-21 104.8 61 78.7
CANSAT56G4260 Cannabis sativa HOM05D007420 ORTHO05D009353 3.5e-21 104.8 61 80.3
Oeu021594.1 Olea europaea HOM05D007420 ORTHO05D009353 4.6e-21 104.4 61 78.7
SalBow1G2150 Salvia bowleyana HOM05D007420 ORTHO05D009353 6.1e-21 104.0 61 78.7
Eucgr.C01109 Eucalyptus grandis HOM05D007420 ORTHO05D009353 7.9e-21 103.6 61 78.7
HanXRQChr03g0062071 Helianthus annuus HOM05D007420 ORTHO05D009353 1.3e-20 102.8 61 78.7
ECA240G1805 Erigeron canadensis HOM05D007420 ORTHO05D009353 1.8e-20 102.4 61 78.7
Migut.L01525 Erythranthe guttata HOM05D007420 ORTHO05D009353 1.8e-20 102.4 61 77.0
TWI34G1269 Tripterygium wilfordii HOM05D007420 ORTHO05D009353 1.8e-20 102.4 61 77.0
Gohir.A06G058200 Gossypium hirsutum HOM05D007420 ORTHO05D009353 2.3e-20 102.1 61 78.7
Gohir.D06G056500 Gossypium hirsutum HOM05D007420 ORTHO05D009353 2.3e-20 102.1 61 78.7
Eucgr.C01288 Eucalyptus grandis HOM05D007420 ORTHO05D009353 3.0e-20 101.7 61 77.0
Potri.011G024500 Populus trichocarpa HOM05D007420 ORTHO05D009353 3.0e-20 101.7 61 73.8
Cc06_g08970 Coffea canephora HOM05D007420 ORTHO05D009353 6.7e-20 100.5 61 77.0
CDE01G0426 Ceratophyllum demersum HOM05D007420 ORTHO05D009353 8.7e-20 100.1 61 78.7
CsaV3_2G002630 Cucumis sativus L. HOM05D007420 ORTHO05D009353 8.7e-20 100.1 61 73.8
CDE03G0079 Ceratophyllum demersum HOM05D007420 ORTHO05D009353 1.1e-19 99.8 61 78.7
CiPaw.03G239800 Carya illinoinensis HOM05D007420 ORTHO05D009353 1.5e-19 99.4 61 77.0
TPR.G9078 Trifolium pratense HOM05D007420 ORTHO05D009353 1.5e-19 99.4 61 75.4
Sed0006703 Sechium edule HOM05D007420 ORTHO05D009353 1.9e-19 99.0 61 73.8
ClCG11G002810 Citrullus lanatus HOM05D007420 ORTHO05D009353 2.5e-19 98.6 61 72.1
Manes.06G052500 Manihot esculenta HOM05D007420 ORTHO05D009353 2.5e-19 98.6 61 77.0
Nn2g11931 Nelumbo nucifera HOM05D007420 ORTHO05D009353 2.5e-19 98.6 59 79.7
Thhalv10019233m.g Eutrema salsugineum HOM05D007420 ORTHO05D009353 3.3e-19 98.2 61 75.4
MD15G1177800 Malus domestica HOM05D007420 ORTHO05D009353 4.3e-19 97.8 61 77.0
Nn8g39361 Nelumbo nucifera HOM05D007420 ORTHO05D009353 4.3e-19 97.8 61 77.0
BolC6t38847H Brassica oleracea HOM05D007420 ORTHO05D009353 5.7e-19 97.4 61 73.8
RcHm_v2.0_Chr2g0089401 Rosa chinensis HOM05D007420 ORTHO05D009353 7.4e-19 97.1 61 73.8
AL2G27600 Arabidopsis lyrata HOM05D007420 ORTHO05D009353 9.7e-19 96.7 61 73.8
Carub.0002s1522 Capsella rubella HOM05D007420 ORTHO05D009353 9.7e-19 96.7 61 73.8
Sp5g23780 Schrenkiella parvula HOM05D007420 ORTHO05D009353 9.7e-19 96.7 61 73.8
THA.LOC104809007 Tarenaya hassleriana HOM05D007420 ORTHO05D009353 9.7e-19 96.7 61 72.1
Duzib150G1214 Durio zibethinus HOM05D007420 ORTHO05D009353 1.3e-18 96.3 58 77.6
CAN.G1424.4 Capsicum annuum HOM05D007420 ORTHO05D009353 1.6e-18 95.9 61 73.8
Phvul.003G161000 Phaseolus vulgaris HOM05D007420 ORTHO05D009353 1.6e-18 95.9 61 72.1
PGR102G0502 Punica granatum HOM05D007420 ORTHO05D009353 1.6e-18 95.9 61 73.8
CARHR061490 Cardamine hirsuta HOM05D007420 ORTHO05D009353 2.2e-18 95.5 61 72.1
Sopen07g001360 Solanum pennellii HOM05D007420 ORTHO05D009353 2.2e-18 95.5 61 73.8
AT1G68680 Arabidopsis thaliana HOM05D007420 ORTHO05D009353 2.8e-18 95.1 61 72.1
Psat4g040560 Pisum sativum HOM05D007420 ORTHO05D009353 2.8e-18 95.1 61 70.5
Solyc07g005430.3 Solanum lycopersicum HOM05D007420 ORTHO05D009353 4.8e-18 94.4 61 72.1
Lalb_Chr13g0302091 Lupinus albus HOM05D007420 ORTHO05D009353 1.1e-17 93.2 61 73.8
GSVIVG01015481001 Vitis vinifera HOM05D007420 ORTHO05D009353 1.1e-17 93.2 60 68.3
Zm00001eb283090 Zea mays HOM05D007420 ORTHO05D009353 6.9e-17 90.5 56 76.8
DCAR_014860 Daucus carota HOM05D007420 ORTHO05D009353 9.0e-17 90.1 52 80.8
Eucgr.C01298 Eucalyptus grandis HOM05D007420 ORTHO05D009353 1.5e-16 89.4 52 80.8
Eucgr.L02717 Eucalyptus grandis HOM05D007420 ORTHO05D009353 1.5e-16 89.4 52 80.8
AagrBONN_evm.TU.Sc2ySwM_362.2614 Anthoceros agrestis HOM05D007420 ORTHO05D009353 2.0e-16 89.0 61 70.5
QL02p087339 Quercus lobata HOM05D007420 ORTHO05D009353 2.6e-16 88.6 53 81.1
Actinidia22015 Actinidia chinensis HOM05D007420 ORTHO05D009353 3.4e-16 88.2 52 78.8
Haze_25622 Corylus avellana HOM05D007420 ORTHO05D009353 3.4e-16 88.2 55 76.4
EL10Ac8g18588 Beta vulgaris HOM05D007420 ORTHO05D009353 4.5e-16 87.8 61 70.5
Ciclev10009973m.g Citrus clementina HOM05D007420 ORTHO05D009353 4.5e-16 87.8 58 74.1
Dinv36572 Davidia involucrata HOM05D007420 ORTHO05D009353 4.5e-16 87.8 59 71.2
FvH4_1g03930 Fragaria vesca HOM05D007420 ORTHO05D009353 5.9e-16 87.4 57 71.9
Gorai.010G066200 Gossypium raimondii HOM05D007420 ORTHO05D009353 7.7e-16 87.0 56 73.2
unitig_85.g27256 Utricularia gibba HOM05D000953 ORTHO05D000231 7.7e-16 87.0 52 80.8
CSS0016223 Camellia sinensis var. sinensis HOM05D007420 ORTHO05D009353 1.3e-15 86.3 52 78.8
MELO3C004528.2 Cucumis melo HOM05D007420 ORTHO05D009353 1.3e-15 86.3 55 72.7
Hma1.2p1_0018F.1_g012820 Hydrangea macrophylla HOM05D007420 ORTHO05D009353 1.3e-15 86.3 52 78.8
Hma1.2p1_0018F.1_g012830 Hydrangea macrophylla HOM05D007420 ORTHO05D009353 1.3e-15 86.3 52 78.8
Thecc.09G120400 Theobroma cacao HOM05D007420 ORTHO05D009353 1.3e-15 86.3 52 76.9
BcaB03g15440 Brassica carinata HOM05D007420 ORTHO05D009353 3.8e-15 84.7 53 75.5
BcaC08g45947 Brassica carinata HOM05D007420 ORTHO05D009353 3.8e-15 84.7 53 75.5
C06p37440 Brassica napus HOM05D007420 ORTHO05D032647 3.8e-15 84.7 55 70.9
Cfa003340 Carpinus fangiana HOM05D007420 ORTHO05D009353 3.8e-15 84.7 55 74.5
Pp3c11_6600 Physcomitrium patens HOM05D007420 ORTHO05D009353 3.8e-15 84.7 61 63.9
vmacro20648 Vaccinium macrocarpon HOM05D007420 ORTHO05D009353 6.5e-15 84.0 52 78.8
Mapoly0048s0106 Marchantia polymorpha HOM05D007420 ORTHO05D009353 8.5e-15 83.6 57 68.4
A07p31870 Brassica napus HOM05D007420 ORTHO05D009353 1.1e-14 83.2 56 69.6
BraA07t30816Z Brassica rapa HOM05D007420 ORTHO05D009353 1.1e-14 83.2 53 73.6
Glyma.05G010400 Glycine max HOM05D007420 ORTHO05D009353 1.1e-14 83.2 52 75.0
SalBow6G6280 Salvia bowleyana HOM05D007420 ORTHO05D009353 1.1e-14 83.2 55 74.5
Lj4g0001906 Lotus japonicus HOM05D007420 ORTHO05D009353 1.4e-14 82.8 52 73.1
Aa31sc12G90 Aethionema arabicum HOM05D007420 ORTHO05D009353 1.9e-14 82.4 56 67.9
Peaxi162Scf00361g00611 Petunia axillaris HOM05D007420 ORTHO05D009353 1.9e-14 82.4 52 73.1
arahy.Tifrunner.gnm1.ann1.QR7ILI Arachis hypogaea HOM05D007420 ORTHO05D009353 2.5e-14 82.0 52 75.0
arahy.Tifrunner.gnm1.ann1.XPL4AE Arachis hypogaea HOM05D007420 ORTHO05D009353 2.5e-14 82.0 52 75.0
FAN19G3121 Fragaria x ananassa HOM05D007420 ORTHO05D009353 3.2e-14 81.6 52 75.0
MD02G1037600 Malus domestica HOM05D007420 ORTHO05D009353 3.2e-14 81.6 52 75.0
Sabra11G0015300 Salix brachista HOM05D007420 ORTHO05D009353 3.2e-14 81.6 52 71.2
FAN22G2307 Fragaria x ananassa HOM05D022909 ORTHO05D009353 5.5e-14 80.9 52 73.1
FAN23G1905 Fragaria x ananassa HOM05D007420 ORTHO05D009353 5.5e-14 80.9 52 73.1
FAN26G1322 Fragaria x ananassa HOM05D007420 ORTHO05D009353 5.5e-14 80.9 52 73.1
FAN28G1248 Fragaria x ananassa HOM05D007420 ORTHO05D009353 5.5e-14 80.9 52 73.1
BcaB03g15439 Brassica carinata HOM05D007420 ORTHO05D009353 7.2e-14 80.5 51 74.5
Nitab4.5_0000750g0050 Nicotiana tabacum HOM05D007420 ORTHO05D009353 7.2e-14 80.5 52 71.2
Nitab4.5_0001193g0010 Nicotiana tabacum HOM05D007420 ORTHO05D009353 7.2e-14 80.5 52 71.2
Prupe.7G237700 Prunus persica HOM05D007420 ORTHO05D009353 9.4e-14 80.1 49 77.6
HPP92_024085 Vanilla planifolia HOM05D007420 ORTHO05D009353 1.6e-13 79.3 52 71.2
SHI28897 Sapria himalayana HOM05D007420 ORTHO05D009353 2.7e-13 78.6 56 64.3
AUR62033448 Chenopodium quinoa HOM05D007420 ORTHO05D009353 7.9e-13 77.0 52 71.2
CBR_g3296 Chara braunii HOM05D007420 ORTHO05D009353 1.0e-12 76.6 61 60.7
Hund09157 Selenicereus undatus HOM05D007420 ORTHO05D009353 1.4e-12 76.3 51 72.5
SEGI_24866 Sequoiadendron giganteum HOM05D007420 ORTHO05D009353 1.4e-12 76.3 52 63.5
Sc14g0000270 Simmondsia chinensis HOM05D007420 ORTHO05D009353 1.4e-12 76.3 49 75.5
MBI01_g34140_MAGBIO Magnolia biondii HOM05D007420 ORTHO05D009353 2.0e-11 72.4 44 77.3
Os05g0176600 Oryza sativa ssp. japonica HOM05D007420 ORTHO05D009353 3.3e-11 71.6 43 81.4
PGSC0003DMG401011174 Solanum tuberosum HOM05D007420 ORTHO05D009353 4.8e-10 67.8 74 50.0
MCO15G341 Micromonas commoda HOM05D007420 ORTHO05D009353 1.4e-06 56.2 46 54.3


User provided reference genes

Program Settings