Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO170G5144 Papaver somniferum HOM05D004875 ORTHO05D005598 0.0e+00 1377.8 730 100.0
PSO339G3761 Papaver somniferum HOM05D004875 ORTHO05D005598 3.2e-285 984.9 545 96.5
PSO384G1619 Papaver somniferum HOM05D004875 ORTHO05D005598 2.2e-148 530.4 287 91.3
Aqoxy1G01286 Aquilegia oxysepala HOM05D004875 ORTHO05D005598 2.4e-46 191.4 394 36.8
PSO349G0337 Papaver somniferum HOM05D004875 ORTHO05D005598 4.1e-46 190.7 511 32.7
Prupe.6G048400 Prunus persica HOM05D004875 ORTHO05D005598 1.2e-45 189.1 393 35.4
MD11G1058300 Malus domestica HOM05D004875 ORTHO05D005598 4.5e-45 187.2 393 35.4
COL.COLO4_11154 Corchorus olitorius HOM05D004875 ORTHO05D005598 2.9e-44 184.5 393 35.6
CANSAT54G1540 Cannabis sativa HOM05D004875 ORTHO05D005598 1.1e-43 182.6 393 34.9
CiPaw.13G069200 Carya illinoinensis HOM05D004875 ORTHO05D005598 1.1e-43 182.6 393 34.4
TAR633G2039 Trochodendron aralioides HOM05D004875 ORTHO05D005598 1.5e-43 182.2 419 33.9
RcHm_v2.0_Chr5g0071641 Rosa chinensis HOM05D004875 ORTHO05D005598 2.5e-43 181.4 393 34.9
BcaB08g36179 Brassica carinata HOM05D004875 ORTHO05D005598 3.2e-43 181.0 515 30.1
BcaC04g19867 Brassica carinata HOM05D004875 ORTHO05D005598 4.2e-43 180.6 510 29.4
BolC9t57888H Brassica oleracea HOM05D004875 ORTHO05D005598 4.2e-43 180.6 510 29.4
FAN16G0994 Fragaria x ananassa HOM05D004875 ORTHO05D005598 5.5e-43 180.3 422 33.4
PSO765G0012 Papaver somniferum HOM05D004875 ORTHO05D005598 5.5e-43 180.3 476 33.2
Psat5g154480 Pisum sativum HOM05D004875 ORTHO05D005598 5.5e-43 180.3 416 34.4
Potri.013G152800 Populus trichocarpa HOM05D004875 ORTHO05D005598 5.5e-43 180.3 393 33.8
arahy.Tifrunner.gnm1.ann1.7Z8DLY Arachis hypogaea HOM05D004875 ORTHO05D005598 7.2e-43 179.9 423 32.6
arahy.Tifrunner.gnm1.ann1.LY55DJ Arachis hypogaea HOM05D004875 ORTHO05D005598 9.4e-43 179.5 423 32.6
Cfa011778 Carpinus fangiana HOM05D004875 ORTHO05D005598 9.4e-43 179.5 415 33.0
AL8G34640 Arabidopsis lyrata HOM05D004875 ORTHO05D005598 1.6e-42 178.7 510 29.0
Lalb_Chr20g0114691 Lupinus albus HOM05D004875 ORTHO05D005598 1.6e-42 178.7 415 33.7
QL01p026245 Quercus lobata HOM05D004875 ORTHO05D005598 1.6e-42 178.7 398 34.9
FvH4_3g39760 Fragaria vesca HOM05D004875 ORTHO05D005598 2.7e-42 177.9 422 33.2
Aa31LG11G230 Aethionema arabicum HOM05D004875 ORTHO05D005598 3.6e-42 177.6 510 30.0
C09p50320 Brassica napus HOM05D004875 ORTHO05D005598 3.6e-42 177.6 509 29.1
A10p15830 Brassica napus HOM05D004875 ORTHO05D005598 4.7e-42 177.2 510 29.2
Ciclev10030286m.g Citrus clementina HOM05D004875 ORTHO05D005598 4.7e-42 177.2 392 33.7
Thecc.09G357800 Theobroma cacao HOM05D004875 ORTHO05D005598 4.7e-42 177.2 396 34.8
Glyma.18G057100 Glycine max HOM05D004875 ORTHO05D005598 6.1e-42 176.8 427 33.7
GSVIVG01024634001 Vitis vinifera HOM05D004875 ORTHO05D005598 8.0e-42 176.4 399 34.3
Glyma.11G163900 Glycine max HOM05D004875 ORTHO05D005598 1.0e-41 176.0 424 34.2
TPR.G25698 Trifolium pratense HOM05D004875 ORTHO05D005598 1.4e-41 175.6 419 34.6
BraA10t43642Z Brassica rapa HOM05D004875 ORTHO05D005598 1.8e-41 175.3 510 29.0
FAN11G0831 Fragaria x ananassa HOM05D004875 ORTHO05D005598 2.3e-41 174.9 422 32.9
Duzib168G1610 Durio zibethinus HOM05D004875 ORTHO05D005598 5.2e-41 173.7 330 37.6
Sp6g20140 Schrenkiella parvula HOM05D004875 ORTHO05D005598 5.2e-41 173.7 510 29.2
CSS0036828 Camellia sinensis var. sinensis HOM05D004875 ORTHO05D005598 6.7e-41 173.3 393 34.6
MD03G1056500 Malus domestica HOM05D004875 ORTHO05D005598 6.7e-41 173.3 393 33.3
Solyc09g057910.3 Solanum lycopersicum HOM05D004875 ORTHO05D005598 8.8e-41 172.9 393 33.1
AT5G58450 Arabidopsis thaliana HOM05D004875 ORTHO05D005598 1.1e-40 172.6 509 28.5
CSS0009670 Camellia sinensis var. sinensis HOM05D004875 ORTHO05D005598 1.1e-40 172.6 414 33.6
Sed0004894 Sechium edule HOM05D004875 ORTHO05D005598 1.5e-40 172.2 413 31.5
Sopen09g013270 Solanum pennellii HOM05D004875 ORTHO05D005598 1.5e-40 172.2 393 32.8
MBI15_g31180_MAGBIO Magnolia biondii HOM05D004875 ORTHO05D005598 2.0e-40 171.8 420 32.6
Sabra13G0122800 Salix brachista HOM05D004875 ORTHO05D005598 2.0e-40 171.8 333 36.0
ECA247G1423 Erigeron canadensis HOM05D004875 ORTHO05D005598 2.6e-40 171.4 392 32.9
FAN21G2306 Fragaria x ananassa HOM05D004875 ORTHO05D005598 3.3e-40 171.0 426 32.6
Actinidia32610 Actinidia chinensis HOM05D004875 ORTHO05D005598 4.4e-40 170.6 394 34.0
Lj6g0003221 Lotus japonicus HOM05D004875 ORTHO05D005598 7.4e-40 169.9 419 32.9
ClCG02G019240 Citrullus lanatus HOM05D004875 ORTHO05D005598 9.7e-40 169.5 415 31.3
Thhalv10012545m.g Eutrema salsugineum HOM05D004875 ORTHO05D005598 1.3e-39 169.1 509 29.1
FAN25G2145 Fragaria x ananassa HOM05D004875 ORTHO05D005598 1.3e-39 169.1 422 32.5
Medtr3g465700 Medicago truncatula HOM05D004875 ORTHO05D005598 1.3e-39 169.1 416 33.7
CARHR272270 Cardamine hirsuta HOM05D004875 ORTHO05D005598 1.7e-39 168.7 417 31.7
Gorai.009G113500 Gossypium raimondii HOM05D004875 ORTHO05D005598 1.7e-39 168.7 423 32.4
THA.LOC104799387 Tarenaya hassleriana HOM05D004875 ORTHO05D005598 1.7e-39 168.7 418 31.6
Carub.0008s1904 Capsella rubella HOM05D004875 ORTHO05D005598 2.2e-39 168.3 510 28.6
DCAR_018231 Daucus carota HOM05D004875 ORTHO05D005598 2.2e-39 168.3 393 33.1
Gohir.D05G109200 Gossypium hirsutum HOM05D004875 ORTHO05D005598 2.2e-39 168.3 423 32.4
Actinidia23196 Actinidia chinensis HOM05D004875 ORTHO05D005598 6.3e-39 166.8 394 33.5
Peaxi162Scf00055g01011 Petunia axillaris HOM05D004875 ORTHO05D005598 1.4e-38 165.6 393 33.6
VMungo0540G0701 Vigna mungo HOM05D004875 ORTHO05D005598 4.1e-38 164.1 426 33.1
Haze_24411 Corylus avellana HOM05D004875 ORTHO05D005598 7.0e-38 163.3 471 29.7
HanXRQChr08g0228771 Helianthus annuus HOM05D004875 ORTHO05D005598 9.1e-38 162.9 396 32.6
PGR102G0105 Punica granatum HOM05D004875 ORTHO05D005598 1.2e-37 162.5 392 31.9
Gohir.A05G109100 Gossypium hirsutum HOM05D004875 ORTHO05D005598 1.6e-37 162.2 396 33.1
Cc01_g14850 Coffea canephora HOM05D004875 ORTHO05D000053 2.6e-37 161.4 399 32.6
CsaV3_6G015880 Cucumis sativus L. HOM05D004875 ORTHO05D005598 2.6e-37 161.4 414 31.4
vmacro02918 Vaccinium macrocarpon HOM05D004875 ORTHO05D005598 4.5e-37 160.6 403 32.8
Lsat_1_v5_gn_9_14720 Lactuca sativa HOM05D004875 ORTHO05D005598 1.0e-36 159.5 393 31.8
TWI31G0826 Tripterygium wilfordii HOM05D004875 ORTHO05D005598 1.0e-36 159.5 402 32.6
Hma1.2p1_1692F.1_g297880 Hydrangea macrophylla HOM05D004875 ORTHO05D005598 1.3e-36 159.1 421 30.6
TWI79G1304 Tripterygium wilfordii HOM05D004875 ORTHO05D005598 1.7e-36 158.7 420 32.1
AUR62009668 Chenopodium quinoa HOM05D004875 ORTHO05D005598 2.9e-36 157.9 416 30.3
MSTRG.12688 Avicennia marina HOM05D004875 ORTHO05D005598 3.8e-36 157.5 417 31.9
Manes.02G211800 Manihot esculenta HOM05D004875 ORTHO05D005598 3.8e-36 157.5 415 31.6
Lj1C127G1 Lonicera japonica HOM05D004875 ORTHO05D005598 5.0e-36 157.1 402 31.8
Nn2g11010 Nelumbo nucifera HOM05D004875 ORTHO05D005598 5.0e-36 157.1 396 33.6
SalBow2G1321 Salvia bowleyana HOM05D004875 ORTHO05D005598 6.5e-36 156.8 412 32.0
Dinv09669 Davidia involucrata HOM05D004875 ORTHO05D005598 1.1e-35 156.0 394 32.7
AUR62001870 Chenopodium quinoa HOM05D004875 ORTHO05D005598 2.5e-35 154.8 416 30.0
Rhsim13G0064100 Rhododendron simsii HOM05D004875 ORTHO05D005598 3.2e-35 154.5 411 31.9
HanXRQChr13g0386431 Helianthus annuus HOM05D004875 ORTHO05D005598 1.2e-34 152.5 393 31.3
Phvul.006G074100 Phaseolus vulgaris HOM05D004875 ORTHO05D005598 1.2e-34 152.5 422 32.2
Eucgr.B04004 Eucalyptus grandis HOM05D004875 ORTHO05D005598 4.7e-34 150.6 414 30.7
Os05g0345400 Oryza sativa ssp. japonica HOM05D004875 ORTHO05D005598 6.1e-34 150.2 423 31.0
SEGI_14366 Sequoiadendron giganteum HOM05D004875 ORTHO05D005598 8.0e-34 149.8 396 31.3
SGA_v2.0_scaffold146G36120 Striga asiatica HOM05D004875 ORTHO05D005598 5.2e-33 147.1 413 30.0
EL10Ac7g15921 Beta vulgaris HOM05D004875 ORTHO05D005598 2.0e-32 145.2 421 29.7
ATR0594G111 Amborella trichopoda HOM05D004875 ORTHO05D005598 5.7e-32 143.7 490 27.8
Zm00001eb286340 Zea mays HOM05D004875 ORTHO05D005598 2.2e-31 141.7 363 30.0
HPP92_003240 Vanilla planifolia HOM05D004875 ORTHO05D005598 6.3e-31 140.2 419 29.1
Atru.chr3.4118 Acer truncatum HOM05D004875 ORTHO05D005598 1.1e-30 139.4 347 31.1
CDE04G2228 Ceratophyllum demersum HOM05D004875 ORTHO05D005598 1.8e-30 138.7 425 29.6
Ca_15009_v3 Cicer arietinum L. HOM05D004875 ORTHO05D005598 2.7e-29 134.8 240 38.8
Ah.08g215110 Amaranthus hybridus HOM05D004875 ORTHO05D005598 1.0e-28 132.9 419 28.9
Hund05024 Selenicereus undatus HOM05D004875 ORTHO05D005598 1.3e-28 132.5 418 28.9
Sc12g0001970 Simmondsia chinensis HOM05D004875 ORTHO05D005598 1.9e-27 128.6 287 33.4
Mapoly0170s0019 Marchantia polymorpha HOM05D004875 ORTHO05D005598 4.2e-27 127.5 420 28.1
Cpa.g.sc2.355 Carica papaya HOM05D004875 ORTHO05D005598 7.2e-27 126.7 326 31.3
MELO3C027117.2 Cucumis melo HOM05D004875 ORTHO05D005598 8.0e-26 123.2 262 32.8
Migut.N00759 Erythranthe guttata HOM05D004875 ORTHO05D005598 2.6e-24 118.2 385 29.4
Nitab4.5_0000002g0030 Nicotiana tabacum HOM05D004875 ORTHO05D005598 4.4e-24 117.5 384 30.5
CDE07G1129 Ceratophyllum demersum HOM05D004875 ORTHO05D005598 9.8e-24 116.3 404 29.0
AagrBONN_evm.TU.Sc2ySwM_228.3164 Anthoceros agrestis HOM05D004875 ORTHO05D005598 2.0e-21 108.6 367 29.2
Nitab4.5_0005130g0040 Nicotiana tabacum HOM05D004875 ORTHO05D005598 5.9e-21 107.1 438 27.4
Pp3c18_5510 Physcomitrium patens HOM05D004875 ORTHO05D005598 8.0e-18 96.7 363 24.5
unitig_0.g436 Utricularia gibba HOM05D004875 ORTHO05D005598 3.9e-12 77.8 213 32.4
CBR_g50477 Chara braunii HOM05D004875 ORTHO05D005598 1.2e-08 66.2 145 26.9


User provided reference genes

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