Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO170G5102 Papaver somniferum HOM05D007752 ORTHO05D009994 1.0e-187 660.6 532 100.0
PSO017G1004 Papaver somniferum HOM05D007752 ORTHO05D009994 8.0e-185 651.0 532 99.2
CSS0006720 Camellia sinensis var. sinensis HOM05D007752 ORTHO05D009994 2.5e-45 187.6 507 58.6
TAR633G0335 Trochodendron aralioides HOM05D007752 ORTHO05D009994 4.3e-45 186.8 144 58.3
CSS0000350 Camellia sinensis var. sinensis HOM05D007752 ORTHO05D009994 2.0e-42 177.9 507 60.6
Sc20g0006950 Simmondsia chinensis HOM05D007752 ORTHO05D009994 3.0e-38 164.1 172 47.7
Eucgr.A00738 Eucalyptus grandis HOM05D007752 ORTHO05D009994 2.1e-36 157.9 169 45.0
Lj3P941T40 Lonicera japonica HOM05D007752 ORTHO05D009994 3.4e-34 150.6 163 44.2
Haze_21175 Corylus avellana HOM05D007752 ORTHO05D009994 4.5e-34 150.2 139 49.6
QL07p032115 Quercus lobata HOM05D007752 ORTHO05D009994 9.9e-34 149.1 148 49.3
Lj1g0026088 Lotus japonicus HOM05D007752 ORTHO05D009994 7.9e-31 139.4 171 41.5
Cfa017034 Carpinus fangiana HOM05D007752 ORTHO05D009994 6.7e-30 136.3 138 44.9
ClCG10G022730 Citrullus lanatus HOM05D007752 ORTHO05D009994 8.7e-30 136.0 173 39.3
Sed0005875 Sechium edule HOM05D007752 ORTHO05D009994 4.3e-29 133.7 162 40.7
CiPaw.10G164800 Carya illinoinensis HOM05D007752 ORTHO05D009994 7.4e-29 132.9 166 41.6
MBI03_g22789_MAGBIO Magnolia biondii HOM05D007752 ORTHO05D009994 9.6e-29 132.5 142 44.4
Nn2g10299 Nelumbo nucifera HOM05D007752 ORTHO05D009994 1.4e-27 128.6 174 40.2
PGR031G1793 Punica granatum HOM05D007752 ORTHO05D009994 1.4e-27 128.6 158 41.1
Rhsim04G0121800 Rhododendron simsii HOM05D007752 ORTHO05D009994 3.1e-27 127.5 155 41.9
Actinidia29032 Actinidia chinensis HOM05D007752 ORTHO05D009994 4.0e-27 127.1 138 47.1
TWI77G0759 Tripterygium wilfordii HOM05D007752 ORTHO05D009994 9.0e-27 125.9 157 42.7
Ciclev10013314m.g Citrus clementina HOM05D007752 ORTHO05D009994 1.5e-26 125.2 141 42.6
Zm00001eb016080 Zea mays HOM05D007752 ORTHO05D009994 7.6e-26 122.9 168 39.9
SalBow8G2716 Salvia bowleyana HOM05D007752 ORTHO05D009994 6.4e-25 119.8 167 39.5
SGA_v2.0_scaffold85G26614 Striga asiatica HOM05D007752 ORTHO05D009994 3.9e-22 110.5 131 42.0
TPR.G14113 Trifolium pratense HOM05D007752 ORTHO05D009994 3.9e-22 110.5 410 59.8
Sabra04G0153400 Salix brachista HOM05D007752 ORTHO05D009994 1.1e-21 109.0 155 36.1
Medtr7g073260 Medicago truncatula HOM05D007752 ORTHO05D009994 2.5e-21 107.8 149 36.9
Aqoxy4G02425 Aquilegia oxysepala HOM05D007752 ORTHO05D009994 1.3e-20 105.5 142 38.0
MELO3C009103.2 Cucumis melo HOM05D007752 ORTHO05D009994 2.1e-20 104.8 154 33.8
Migut.J00038 Erythranthe guttata HOM05D007752 ORTHO05D009994 3.7e-20 104.0 135 40.0
COL.COLO4_06481 Corchorus olitorius HOM05D007752 ORTHO05D000248 8.1e-20 102.8 172 29.7
Lsat_1_v5_gn_5_152320 Lactuca sativa HOM05D007752 ORTHO05D009994 8.1e-20 102.8 141 40.4
Oeu057981.1 Olea europaea HOM05D007752 ORTHO05D009994 8.1e-20 102.8 128 40.6
Potri.016G136700 Populus trichocarpa HOM05D007752 ORTHO05D009994 1.4e-19 102.1 162 34.0
Ca_07763_v3 Cicer arietinum L. HOM05D007752 ORTHO05D009994 1.8e-19 101.7 162 35.2
HanXRQChr01g0000111 Helianthus annuus HOM05D007752 ORTHO05D009994 1.8e-19 101.7 140 39.3
Prupe.6G293600 Prunus persica HOM05D007752 ORTHO05D009994 4.0e-19 100.5 140 39.3
Glyma.09G274800 Glycine max HOM05D007752 ORTHO05D009994 5.3e-19 100.1 103 47.6
Gorai.005G004200 Gossypium raimondii HOM05D007752 ORTHO05D009994 5.3e-19 100.1 157 35.0
Hma1.2p1_0174F.1_g076820 Hydrangea macrophylla HOM05D007752 ORTHO05D009994 1.5e-18 98.6 138 37.7
Cpa.g.sc86.57 Carica papaya HOM05D007752 ORTHO05D009994 2.0e-18 98.2 173 31.8
CANSAT35G0798 Cannabis sativa HOM05D007752 ORTHO05D009994 4.5e-18 97.1 152 33.6
Ah.08g209310 Amaranthus hybridus HOM05D007752 ORTHO05D009994 7.6e-18 96.3 138 33.3
SalBow1G2062 Salvia bowleyana HOM05D007752 ORTHO05D009994 2.2e-17 94.7 141 36.2
SalBow1G4712 Salvia bowleyana HOM05D007752 ORTHO05D009994 2.2e-17 94.7 141 36.2
Thecc.04G151600 Theobroma cacao HOM05D007752 ORTHO05D009994 2.9e-17 94.4 162 34.0
MD04G1174700 Malus domestica HOM05D007752 ORTHO05D009994 3.8e-17 94.0 158 31.0
AUR62029765 Chenopodium quinoa HOM05D007752 ORTHO05D009994 6.5e-17 93.2 156 31.4
THA.LOC104807022 Tarenaya hassleriana HOM05D007752 ORTHO05D009994 3.5e-15 87.4 161 29.8
VMungo1383G3403 Vigna mungo HOM05D007752 ORTHO05D009994 3.5e-15 87.4 173 30.6
VMungo0251G1651 Vigna mungo HOM05D007752 ORTHO05D009994 4.6e-15 87.0 168 32.7
ECA248G3142 Erigeron canadensis HOM05D007752 ORTHO05D009994 1.3e-14 85.5 139 31.7
ATR1127G173 Amborella trichopoda HOM05D007752 ORTHO05D009994 3.0e-14 84.3 91 44.0
EL10Ac7g17101 Beta vulgaris HOM05D007752 ORTHO05D000248 3.9e-14 84.0 140 31.4
Solyc09g042250.2 Solanum lycopersicum HOM05D007752 ORTHO05D009994 1.9e-13 81.6 137 32.8
Dinv16979 Davidia involucrata HOM05D007752 ORTHO05D009994 5.7e-13 80.1 198 35.4
SalBow5G4979 Salvia bowleyana HOM05D007752 ORTHO05D009994 5.7e-13 80.1 132 33.3
CDE04G1037 Ceratophyllum demersum HOM05D007752 ORTHO05D009994 2.1e-12 78.2 87 41.4
Phvul.008G082800 Phaseolus vulgaris HOM05D007752 ORTHO05D009994 6.3e-12 76.6 173 28.3
RcHm_v2.0_Chr3g0460471 Rosa chinensis HOM05D007752 ORTHO05D009994 1.1e-11 75.9 188 29.8
Gohir.A02G003300 Gossypium hirsutum HOM05D007752 ORTHO05D009994 3.1e-11 74.3 157 28.7
FvH4_6g09870 Fragaria vesca HOM05D007752 ORTHO05D009994 5.3e-11 73.6 86 39.5
AUR62006417 Chenopodium quinoa HOM05D007752 ORTHO05D000248 6.9e-11 73.2 137 27.7
FAN14G1029 Fragaria x ananassa HOM05D007752 ORTHO05D009994 6.9e-11 73.2 85 40.0
FAN09G1066 Fragaria x ananassa HOM05D007752 ORTHO05D009994 2.0e-10 71.6 84 39.3
Sopen09g015390 Solanum pennellii HOM05D007752 ORTHO05D009994 1.0e-09 69.3 137 29.9
Gohir.D02G003700 Gossypium hirsutum HOM05D007752 ORTHO05D009994 1.3e-09 68.9 141 29.1
Nitab4.5_0004433g0030 Nicotiana tabacum HOM05D007752 ORTHO05D009994 1.3e-09 68.9 138 29.7
FAN02G1651 Fragaria x ananassa HOM05D007752 ORTHO05D009994 1.7e-09 68.6 179 27.9
Psat3g118880 Pisum sativum HOM05D007752 ORTHO05D009994 5.0e-09 67.0 138 31.9
SEGI_04521 Sequoiadendron giganteum HOM05D005337 ORTHO05D009920 8.5e-09 66.2 112 32.1
Thecc.05G003500 Theobroma cacao HOM05D008684 ORTHO05D010796 1.9e-08 65.1 170 25.9
Actinidia06778 Actinidia chinensis HOM05D002479 ORTHO05D002675 3.2e-08 64.3 188 28.2
Duzib093G0470 Durio zibethinus HOM05D008684 ORTHO05D010796 4.2e-08 63.9 175 25.7
CAN.G930.13 Capsicum annuum HOM05D007173 ORTHO05D009151 7.2e-08 63.2 162 26.5
Atru.chr3.1557 Acer truncatum HOM05D008684 ORTHO05D010796 1.2e-07 62.4 171 25.1
ATR0605G071 Amborella trichopoda HOM05D004783 ORTHO05D005581 2.1e-07 61.6 169 26.6
TPR.G29077 Trifolium pratense HOM05D008684 ORTHO05D010796 2.1e-07 61.6 172 23.8
Atru.chr3.1578 Acer truncatum HOM05D008684 ORTHO05D010796 4.6e-07 60.5 171 24.6
Os03g0336000 Oryza sativa ssp. japonica HOM05D007752 ORTHO05D009994 4.6e-07 60.5 88 35.2
Phvul.008G006600 Phaseolus vulgaris HOM05D008684 ORTHO05D010796 4.6e-07 60.5 172 23.8
CDE06G1380 Ceratophyllum demersum HOM05D007752 ORTHO05D009994 6.1e-07 60.1 151 32.5
A06p12740 Brassica napus HOM05D007552 ORTHO05D009397 7.9e-07 59.7 154 27.9
BraA06t24434Z Brassica rapa HOM05D007552 ORTHO05D009397 7.9e-07 59.7 154 27.9
A02p22890 Brassica napus HOM05D006503 ORTHO05D008116 1.0e-06 59.3 117 29.1
BraA02t07289Z Brassica rapa HOM05D006503 ORTHO05D008116 1.0e-06 59.3 117 29.1
Ca_08075_v3 Cicer arietinum L. HOM05D008684 ORTHO05D010796 1.0e-06 59.3 172 23.8
MELO3C009949.2 Cucumis melo HOM05D007390 ORTHO05D009114 1.0e-06 59.3 166 24.7
ECA240G1124 Erigeron canadensis HOM05D005398 ORTHO05D000476 1.0e-06 59.3 110 33.6
MD00G1189300 Malus domestica HOM05D008684 ORTHO05D010796 1.3e-06 58.9 173 20.8
Peaxi162Scf00141g00093 Petunia axillaris HOM05D007752 ORTHO05D009994 1.8e-06 58.5 79 34.2
Sabra02G0188800 Salix brachista HOM05D007486 ORTHO05D003673 1.8e-06 58.5 119 27.7
Medtr7g082160 Medicago truncatula HOM05D008684 ORTHO05D010796 2.3e-06 58.2 172 22.7
Aa31LG4G1470 Aethionema arabicum HOM05D006503 ORTHO05D008116 3.0e-06 57.8 116 26.7
ClCG07G017250 Citrullus lanatus HOM05D007456 ORTHO05D009411 3.0e-06 57.8 144 25.7
Hma1.2p1_1765F.1_g301480 Hydrangea macrophylla HOM05D000424 ORTHO05D000355 3.0e-06 57.8 140 28.6
Sed0026452 Sechium edule HOM05D007456 ORTHO05D009411 3.0e-06 57.8 159 27.0
Atru.chr1.698 Acer truncatum HOM05D034768 ORTHO05D009747 5.1e-06 57.0 109 25.7
FAN03G3193 Fragaria x ananassa HOM05D007456 ORTHO05D009411 5.1e-06 57.0 129 29.5
Glyma.18G295400 Glycine max HOM05D008684 ORTHO05D010796 6.7e-06 56.6 172 22.7
Psat3g098480 Pisum sativum HOM05D008684 ORTHO05D010796 6.7e-06 56.6 172 22.7
Sabra15G0094300 Salix brachista HOM05D007383 ORTHO05D009254 8.7e-06 56.2 115 26.1
Sabra15G0094600 Salix brachista HOM05D007383 ORTHO05D009254 8.7e-06 56.2 115 26.1
SalBow4G3102 Salvia bowleyana HOM05D007390 ORTHO05D009114 8.7e-06 56.2 110 30.0
PGSC0003DMG400038126 Solanum tuberosum HOM05D007752 ORTHO05D009994 8.7e-06 56.2 75 36.0


User provided reference genes

Program Settings