Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO170G4955 Papaver somniferum HOM05D007307 ORTHO05D009190 2.4e-273 944.9 469 100.0
PSO017G5597 Papaver somniferum HOM05D007307 ORTHO05D009190 1.1e-270 936.0 469 98.7
TAR625G0746 Trochodendron aralioides HOM05D007307 ORTHO05D009190 8.3e-202 707.2 470 75.1
Nn2g12391 Nelumbo nucifera HOM05D007307 ORTHO05D009190 1.4e-201 706.4 467 74.7
QL05p036096 Quercus lobata HOM05D007307 ORTHO05D009190 3.5e-200 701.8 471 73.5
CDE04G0143 Ceratophyllum demersum HOM05D007307 ORTHO05D009190 3.6e-197 691.8 449 74.6
MSTRG.11181 Avicennia marina HOM05D007307 ORTHO05D009190 1.1e-196 690.3 469 72.3
Lj5A80T58 Lonicera japonica HOM05D007307 ORTHO05D009190 4.0e-196 688.3 472 72.7
CiPaw.02G162300 Carya illinoinensis HOM05D007307 ORTHO05D009190 6.8e-196 687.6 471 72.6
Nitab4.5_0002568g0020 Nicotiana tabacum HOM05D007307 ORTHO05D009190 3.4e-195 685.3 467 70.9
Nitab4.5_0012161g0020 Nicotiana tabacum HOM05D007307 ORTHO05D009190 6.4e-194 681.0 467 70.7
PGSC0003DMG400019823 Solanum tuberosum HOM05D007307 ORTHO05D009190 8.3e-194 680.6 465 71.0
Solyc03g116870.3 Solanum lycopersicum HOM05D007307 ORTHO05D009190 1.1e-193 680.2 466 71.5
Sopen03g035800 Solanum pennellii HOM05D007307 ORTHO05D009190 2.4e-193 679.1 466 71.5
Peaxi162Scf00332g00525 Petunia axillaris HOM05D007307 ORTHO05D009190 5.4e-193 677.9 466 71.0
AUR62026998 Chenopodium quinoa HOM05D007307 ORTHO05D009190 2.7e-192 675.6 464 71.1
AUR62030838 Chenopodium quinoa HOM05D007307 ORTHO05D009190 1.0e-191 673.7 464 70.7
CSS0015248 Camellia sinensis var. sinensis HOM05D007307 ORTHO05D009190 1.3e-191 673.3 445 73.9
Manes.04G102400 Manihot esculenta HOM05D007307 ORTHO05D009190 3.0e-191 672.2 468 71.2
ClCG09G003340 Citrullus lanatus HOM05D007307 ORTHO05D009190 5.1e-191 671.4 471 71.1
Cpa.g.sc10.77 Carica papaya HOM05D007307 ORTHO05D009190 6.6e-191 671.0 472 71.0
RcHm_v2.0_Chr2g0132981 Rosa chinensis HOM05D007307 ORTHO05D009190 4.3e-190 668.3 469 70.6
CAN.G407.66 Capsicum annuum HOM05D007307 ORTHO05D009190 3.6e-189 665.2 469 69.7
Aqoxy7G01916 Aquilegia oxysepala HOM05D007307 ORTHO05D009190 4.7e-189 664.8 465 71.4
Cc04_g05100 Coffea canephora HOM05D007307 ORTHO05D009190 6.2e-189 664.5 467 70.4
SalBow7G3293 Salvia bowleyana HOM05D007307 ORTHO05D009190 1.8e-188 662.9 458 70.3
Haze_16668 Corylus avellana HOM05D007307 ORTHO05D009190 2.4e-188 662.5 471 70.1
Glyma.08G218800 Glycine max HOM05D007307 ORTHO05D009190 4.0e-188 661.8 455 71.6
Thecc.06G041700 Theobroma cacao HOM05D007307 ORTHO05D009190 6.8e-188 661.0 471 69.4
GSVIVG01015957001 Vitis vinifera HOM05D007307 ORTHO05D009190 6.8e-188 661.0 465 71.6
Ciclev10025544m.g Citrus clementina HOM05D007307 ORTHO05D009190 8.9e-188 660.6 471 70.7
Glyma.07G023000 Glycine max HOM05D007307 ORTHO05D009190 1.5e-187 659.8 453 71.7
Gorai.009G123800 Gossypium raimondii HOM05D007307 ORTHO05D009190 2.0e-187 659.4 472 70.8
FAN14G3907 Fragaria x ananassa HOM05D007307 ORTHO05D009190 3.4e-187 658.7 469 69.1
THA.LOC104813590 Tarenaya hassleriana HOM05D007307 ORTHO05D009190 3.4e-187 658.7 460 70.7
FvH4_6g28640 Fragaria vesca HOM05D007307 ORTHO05D009190 7.6e-187 657.5 469 69.1
Gohir.D05G120300 Gossypium hirsutum HOM05D007307 ORTHO05D009190 7.6e-187 657.5 472 70.8
Duzib192G1050 Durio zibethinus HOM05D007307 ORTHO05D009190 9.9e-187 657.1 471 70.7
EL10Ac3g06300 Beta vulgaris HOM05D007307 ORTHO05D009190 1.7e-186 656.4 463 70.2
Lj3g0010338 Lotus japonicus HOM05D007307 ORTHO05D009190 2.2e-186 656.0 449 71.0
Atru.chr10.2412 Acer truncatum HOM05D007307 ORTHO05D009190 2.9e-186 655.6 457 70.9
TPR.G23084 Trifolium pratense HOM05D007307 ORTHO05D009190 4.9e-186 654.8 464 69.6
Actinidia25480 Actinidia chinensis HOM05D007307 ORTHO05D009190 6.4e-186 654.4 468 70.9
ECA246G2038 Erigeron canadensis HOM05D007307 ORTHO05D009190 6.4e-186 654.4 468 67.7
MD17G1223300 Malus domestica HOM05D007307 ORTHO05D009190 8.4e-186 654.1 468 70.1
FAN05G4298 Fragaria x ananassa HOM05D007307 ORTHO05D009190 1.1e-185 653.7 468 68.8
Lsat_1_v5_gn_5_8240 Lactuca sativa HOM05D007307 ORTHO05D009190 1.4e-185 653.3 468 68.8
Aa31LG7G560 Aethionema arabicum HOM05D007307 ORTHO05D009190 1.9e-185 652.9 460 68.9
CsaV3_7G031890 Cucumis sativus L. HOM05D007307 ORTHO05D009190 1.9e-185 652.9 469 69.1
TWI18G0485 Tripterygium wilfordii HOM05D007307 ORTHO05D009190 5.4e-185 651.4 453 70.9
Eucgr.F03957 Eucalyptus grandis HOM05D007307 ORTHO05D009190 7.1e-185 651.0 473 68.9
FAN09G0915 Fragaria x ananassa HOM05D007307 ORTHO05D009190 1.6e-184 649.8 469 68.2
Phvul.010G161300 Phaseolus vulgaris HOM05D007307 ORTHO05D009190 1.6e-184 649.8 444 70.5
Prupe.3G098200 Prunus persica HOM05D007307 ORTHO05D009190 1.6e-184 649.8 460 70.7
MELO3C023468.2 Cucumis melo HOM05D007307 ORTHO05D009190 3.5e-184 648.7 469 68.4
VMungo0331G1235 Vigna mungo HOM05D007307 ORTHO05D009190 4.6e-184 648.3 441 71.4
Migut.I00693 Erythranthe guttata HOM05D007307 ORTHO05D009190 6.0e-184 647.9 473 68.7
Medtr4g007080 Medicago truncatula HOM05D007307 ORTHO05D009190 1.0e-183 647.1 466 68.0
Ca_20542_v3 Cicer arietinum L. HOM05D007307 ORTHO05D009190 1.7e-183 646.4 423 71.9
Potri.001G044300 Populus trichocarpa HOM05D007307 ORTHO05D009190 5.1e-183 644.8 473 69.8
ATR0739G128 Amborella trichopoda HOM05D007307 ORTHO05D009190 8.7e-183 644.0 458 68.3
HanXRQChr08g0235871 Helianthus annuus HOM05D007307 ORTHO05D009190 2.5e-182 642.5 471 67.1
Sed0012177 Sechium edule HOM05D007307 ORTHO05D009190 2.5e-182 642.5 472 68.2
unitig_52.g17476 Utricularia gibba HOM05D007307 ORTHO05D009190 8.1e-181 637.5 459 67.8
Rhsim08G0205700 Rhododendron simsii HOM05D007307 ORTHO05D009190 3.1e-180 635.6 489 67.9
Psat7g260240 Pisum sativum HOM05D007307 ORTHO05D009190 4.0e-180 635.2 459 66.9
Sp1g14290 Schrenkiella parvula HOM05D007307 ORTHO05D009190 2.9e-178 629.0 461 67.7
Carub.0001s1578 Capsella rubella HOM05D007307 ORTHO05D009190 4.9e-178 628.2 462 68.4
Oeu051583.2 Olea europaea HOM05D007307 ORTHO05D009190 1.4e-177 626.7 397 76.6
Thhalv10007586m.g Eutrema salsugineum HOM05D007307 ORTHO05D009190 1.9e-177 626.3 461 67.7
AL1G28140 Arabidopsis lyrata HOM05D007307 ORTHO05D009190 9.3e-177 624.0 462 68.6
BcaB02g06649 Brassica carinata HOM05D007307 ORTHO05D009190 9.3e-177 624.0 462 67.7
AT1G15980 Arabidopsis thaliana HOM05D007307 ORTHO05D009190 1.2e-176 623.6 462 67.7
Hma1.2p1_0109F.1_g052560 Hydrangea macrophylla HOM05D007307 ORTHO05D009190 2.7e-176 622.5 464 67.0
Lalb_Chr25g0278871 Lupinus albus HOM05D007307 ORTHO05D009190 7.8e-176 620.9 423 70.9
Sabra01G0030600 Salix brachista HOM05D007307 ORTHO05D009190 1.7e-175 619.8 515 63.3
A06p12000 Brassica napus HOM05D007307 ORTHO05D009190 2.3e-175 619.4 462 67.5
BraA06t24371Z Brassica rapa HOM05D007307 ORTHO05D009190 2.3e-175 619.4 462 67.5
CARHR016480 Cardamine hirsuta HOM05D007307 ORTHO05D009190 8.7e-175 617.5 456 67.5
BcaC05g25617 Brassica carinata HOM05D007307 ORTHO05D009190 1.6e-173 613.2 461 66.8
CANSAT56G3714 Cannabis sativa HOM05D007307 ORTHO05D009190 6.2e-173 611.3 486 64.8
C05p14190 Brassica napus HOM05D007307 ORTHO05D009190 1.4e-172 610.1 461 66.6
DCAR_017649 Daucus carota HOM05D007307 ORTHO05D009190 4.0e-172 608.6 404 73.5
FAN02G3759 Fragaria x ananassa HOM05D007307 ORTHO05D009190 2.4e-169 599.4 408 70.6
arahy.Tifrunner.gnm1.ann1.X6E8D2 Arachis hypogaea HOM05D007307 ORTHO05D009190 1.1e-166 590.5 468 63.9
Dinv23284 Davidia involucrata HOM05D007307 ORTHO05D009190 1.6e-165 586.6 384 74.0
Os08g0276100 Oryza sativa ssp. japonica HOM05D007307 ORTHO05D009190 8.7e-159 564.3 420 63.3
Zm00001eb176730 Zea mays HOM05D007307 ORTHO05D009190 1.3e-157 560.5 420 63.6
Zm00001eb412420 Zea mays HOM05D007307 ORTHO05D009190 8.4e-154 547.7 420 63.3
Gohir.A05G119300 Gossypium hirsutum HOM05D007307 ORTHO05D009190 2.4e-148 529.6 393 67.4
arahy.Tifrunner.gnm1.ann1.DFM3I4 Arachis hypogaea HOM05D007307 ORTHO05D009190 1.3e-138 497.3 468 58.1
COL.COLO4_26702 Corchorus olitorius HOM05D007307 ORTHO05D009190 7.2e-137 491.5 325 74.2
Ah.01g006960 Amaranthus hybridus HOM05D007307 ORTHO05D009190 4.2e-129 465.7 463 55.5
BolC5t30150H Brassica oleracea HOM05D007307 ORTHO05D009190 4.5e-123 445.7 343 63.0
Pp3c9_19250 Physcomitrium patens HOM05D007307 ORTHO05D009190 7.2e-121 438.3 408 54.2
AagrBONN_evm.TU.Sc2ySwM_344.2748 Anthoceros agrestis HOM05D007307 ORTHO05D009190 3.6e-120 436.0 403 55.3
SMO364G0491 Selaginella moellendorffii HOM05D007307 ORTHO05D009190 2.0e-118 430.3 401 52.9
Pp3c15_23280 Physcomitrium patens HOM05D007307 ORTHO05D009190 3.7e-117 426.0 399 54.1
Mapoly0114s0017 Marchantia polymorpha HOM05D007307 ORTHO05D009190 1.7e-106 390.6 413 48.7
CBR_g34729 Chara braunii HOM05D007307 ORTHO05D009190 4.3e-97 359.4 408 45.1
Hma1.2p1_0109F.1_g052570 Hydrangea macrophylla HOM05D007307 ORTHO05D009190 9.9e-70 268.5 200 64.5
SEGI_02712 Sequoiadendron giganteum HOM05D007307 ORTHO05D009190 4.3e-65 253.1 207 61.4
SEGI_37660 Sequoiadendron giganteum HOM05D007307 ORTHO05D009190 4.3e-65 253.1 207 61.4
Hund06518 Selenicereus undatus HOM05D007307 ORTHO05D009190 8.1e-64 248.8 187 64.2
SEGI_25940 Sequoiadendron giganteum HOM05D007307 ORTHO05D009190 1.0e-50 205.3 199 51.8
Actinidia18248 Actinidia chinensis HOM05D007307 ORTHO05D009190 9.7e-25 119.0 89 68.5
Lj5A80T54 Lonicera japonica HOM05D007307 ORTHO05D009190 8.8e-18 95.9 62 66.1


User provided reference genes

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