Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO170G4951 Papaver somniferum HOM05D005703 ORTHO05D006643 3.1e-179 631.7 328 100.0
Aqoxy5G01507 Aquilegia oxysepala HOM05D005703 ORTHO05D006643 2.5e-128 462.6 330 74.8
Nn6g32200 Nelumbo nucifera HOM05D005703 ORTHO05D006643 6.2e-127 458.0 326 74.2
Potri.004G160800 Populus trichocarpa HOM05D005703 ORTHO05D006643 4.1e-123 445.3 308 75.0
QL11p045612 Quercus lobata HOM05D005703 ORTHO05D006643 1.6e-122 443.4 323 71.5
Cpa.g.sc150.43 Carica papaya HOM05D005703 ORTHO05D006643 1.0e-121 440.7 335 70.7
CiPaw.06G130900 Carya illinoinensis HOM05D005703 ORTHO05D006643 1.5e-120 436.8 322 70.5
Eucgr.D00178 Eucalyptus grandis HOM05D005703 ORTHO05D006643 1.5e-120 436.8 282 77.7
Manes.11G087800 Manihot esculenta HOM05D005703 ORTHO05D006643 1.5e-120 436.8 319 71.8
CSS0001334 Camellia sinensis var. sinensis HOM05D005703 ORTHO05D006643 9.5e-120 434.1 311 73.0
Hma1.2p1_0066F.1_g035910 Hydrangea macrophylla HOM05D005703 ORTHO05D006643 9.5e-120 434.1 279 78.9
GSVIVG01024205001 Vitis vinifera HOM05D005703 ORTHO05D006643 2.8e-119 432.6 276 80.1
RcHm_v2.0_Chr6g0266981 Rosa chinensis HOM05D005703 ORTHO05D006643 4.7e-119 431.8 325 71.7
Actinidia27862 Actinidia chinensis HOM05D005703 ORTHO05D006643 8.1e-119 431.0 281 77.6
FvH4_2g10050 Fragaria vesca HOM05D005703 ORTHO05D006643 4.0e-118 428.7 334 70.4
CsaV3_7G000370 Cucumis sativus L. HOM05D005703 ORTHO05D006643 8.9e-118 427.6 306 73.5
TWI31G0330 Tripterygium wilfordii HOM05D005703 ORTHO05D006643 1.2e-117 427.2 280 77.5
MELO3C002791.2 Cucumis melo HOM05D005703 ORTHO05D006643 2.0e-117 426.4 306 72.9
Lj3g0017018 Lotus japonicus HOM05D005703 ORTHO05D006643 2.6e-117 426.0 331 65.6
Glyma.11G112900 Glycine max HOM05D005703 ORTHO05D006643 1.7e-116 423.3 311 68.8
Atru.chr5.3109 Acer truncatum HOM05D005703 ORTHO05D006643 2.9e-116 422.5 321 70.1
Actinidia02238 Actinidia chinensis HOM05D005703 ORTHO05D006643 3.7e-116 422.2 283 76.0
MSTRG.20056 Avicennia marina HOM05D005703 ORTHO05D006643 3.7e-116 422.2 306 70.9
Sabra04G0107600 Salix brachista HOM05D005703 ORTHO05D006643 4.9e-116 421.8 278 77.7
Gohir.D12G030600 Gossypium hirsutum HOM05D005703 ORTHO05D006643 1.1e-115 420.6 277 76.2
CARHR112270 Cardamine hirsuta HOM05D005703 ORTHO05D006643 2.4e-115 419.5 328 64.6
MD10G1066100 Malus domestica HOM05D005703 ORTHO05D006643 2.4e-115 419.5 277 77.3
ATR0661G148 Amborella trichopoda HOM05D005703 ORTHO05D006643 3.2e-115 419.1 341 66.9
Thecc.02G078100 Theobroma cacao HOM05D005703 ORTHO05D006643 3.2e-115 419.1 302 71.2
Gorai.008G031500 Gossypium raimondii HOM05D005703 ORTHO05D006643 4.1e-115 418.7 277 75.5
Sopen01g052320 Solanum pennellii HOM05D005703 ORTHO05D006643 1.6e-114 416.8 277 75.8
Solyc01g110160.4 Solanum lycopersicum HOM05D005703 ORTHO05D006643 3.5e-114 415.6 278 75.2
VMungo1127G0812 Vigna mungo HOM05D005703 ORTHO05D006643 6.0e-114 414.8 281 73.0
Glyma.12G038800 Glycine max HOM05D005703 ORTHO05D006643 1.3e-113 413.7 311 67.2
Lalb_Chr03g0025421 Lupinus albus HOM05D005703 ORTHO05D006643 1.3e-113 413.7 305 68.5
Sp4g00560 Schrenkiella parvula HOM05D005703 ORTHO05D006643 2.3e-113 412.9 327 65.1
Migut.B00193 Erythranthe guttata HOM05D005703 ORTHO05D006643 3.9e-113 412.1 284 73.2
Aa31LG7G15130 Aethionema arabicum HOM05D005703 ORTHO05D001153 5.1e-113 411.8 328 66.5
COL.COLO4_26014 Corchorus olitorius HOM05D005703 ORTHO05D006643 1.1e-112 410.6 317 68.1
PGSC0003DMG400030971 Solanum tuberosum HOM05D005703 ORTHO05D006643 7.3e-112 407.9 314 68.5
AL4G10560 Arabidopsis lyrata HOM05D005703 ORTHO05D006643 1.2e-111 407.1 330 63.6
Sc14g0002020 Simmondsia chinensis HOM05D005703 ORTHO05D006643 1.2e-111 407.1 331 66.2
HanXRQChr12g0373591 Helianthus annuus HOM05D005703 ORTHO05D006643 2.8e-111 406.0 306 69.0
THA.LOC104824803 Tarenaya hassleriana HOM05D005703 ORTHO05D006643 3.6e-111 405.6 303 68.6
Rhsim05G0069500 Rhododendron simsii HOM05D005703 ORTHO05D006643 6.2e-111 404.8 289 72.0
Lsat_1_v5_gn_5_125081 Lactuca sativa HOM05D005703 ORTHO05D006643 8.1e-111 404.4 343 64.7
Carub.0004s0043 Capsella rubella HOM05D005703 ORTHO05D006643 1.1e-110 404.1 331 63.7
Ca_20918_v3 Cicer arietinum L. HOM05D005703 ORTHO05D006643 1.8e-110 403.3 302 67.2
Ciclev10028680m.g Citrus clementina HOM05D005703 ORTHO05D006643 5.2e-110 401.7 339 64.3
Peaxi162Scf00016g00231 Petunia axillaris HOM05D005703 ORTHO05D006643 5.2e-110 401.7 291 72.2
AT2G21385 Arabidopsis thaliana HOM05D005703 ORTHO05D006643 2.0e-109 399.8 279 70.6
FAN15G0097 Fragaria x ananassa HOM05D005703 ORTHO05D006643 2.6e-109 399.4 334 66.8
TPR.G16235 Trifolium pratense HOM05D005703 ORTHO05D006643 1.7e-108 396.7 289 67.8
AUR62010417 Chenopodium quinoa HOM05D005703 ORTHO05D006643 4.9e-108 395.2 355 62.5
arahy.Tifrunner.gnm1.ann1.YBLQ63 Arachis hypogaea HOM05D005703 ORTHO05D006643 6.4e-108 394.8 278 70.1
ECA234G1754 Erigeron canadensis HOM05D005703 ORTHO05D006643 1.1e-107 394.0 301 68.4
Medtr4g071190 Medicago truncatula HOM05D005703 ORTHO05D006643 1.4e-107 393.7 293 66.9
HPP92_025877 Vanilla planifolia HOM05D005703 ORTHO05D006643 2.4e-107 392.9 302 67.9
Prupe.8G088000 Prunus persica HOM05D005703 ORTHO05D006643 5.4e-107 391.7 281 74.4
C08p41580 Brassica napus HOM05D005703 ORTHO05D006643 9.2e-107 391.0 316 64.9
BolC8t51720H Brassica oleracea HOM05D005703 ORTHO05D006643 1.2e-106 390.6 317 64.7
AUR62016798 Chenopodium quinoa HOM05D005703 ORTHO05D006643 2.1e-106 389.8 370 59.7
Phvul.011G040900 Phaseolus vulgaris HOM05D005703 ORTHO05D006643 3.5e-106 389.0 259 72.2
BraA09t41216Z Brassica rapa HOM05D005703 ORTHO05D006643 6.0e-106 388.3 282 69.9
A09p58290 Brassica napus HOM05D005703 ORTHO05D006643 2.3e-105 386.3 317 64.4
Psat7g139960 Pisum sativum HOM05D005703 ORTHO05D006643 2.3e-105 386.3 322 63.7
CDE09G1081 Ceratophyllum demersum HOM05D005703 ORTHO05D006643 2.5e-104 382.9 361 58.7
Os09g0531100 Oryza sativa ssp. japonica HOM05D005703 ORTHO05D006643 1.5e-101 373.6 277 67.1
Thhalv10000241m.g Eutrema salsugineum HOM05D005703 ORTHO05D006643 5.8e-101 371.7 251 73.3
Dinv23475 Davidia involucrata HOM05D005703 ORTHO05D006643 4.9e-100 368.6 279 71.3
SalBow6G5125 Salvia bowleyana HOM05D005703 ORTHO05D006643 3.5e-98 362.5 327 61.5
Zm00001eb353590 Zea mays HOM05D005703 ORTHO05D006643 4.6e-98 362.1 277 66.1
Nitab4.5_0011132g0020 Nicotiana tabacum HOM05D005703 ORTHO05D006643 7.8e-98 361.3 327 59.9
SGA_v2.0_scaffold58G20483 Striga asiatica HOM05D005703 ORTHO05D006643 3.3e-96 355.9 281 67.6
Haze_02308 Corylus avellana HOM05D005703 ORTHO05D006643 7.3e-96 354.8 305 63.0
Hma1.2p1_0066F.1_g035920 Hydrangea macrophylla HOM05D005703 ORTHO05D006643 3.6e-95 352.4 277 67.5
arahy.Tifrunner.gnm1.ann1.R55P3J Arachis hypogaea HOM05D005703 ORTHO05D006643 1.4e-94 350.5 251 69.7
ClCG02G004580 Citrullus lanatus HOM05D005703 ORTHO05D006643 2.6e-93 346.3 306 64.4
MELO3C013421.2 Cucumis melo HOM05D005703 ORTHO05D006643 3.4e-93 345.9 280 67.9
EL10Ac9g21670 Beta vulgaris HOM05D005703 ORTHO05D006643 1.2e-90 337.4 325 58.5
DCAR_022931 Daucus carota HOM05D005703 ORTHO05D006643 4.6e-90 335.5 279 63.4
Sed0007704 Sechium edule HOM05D005703 ORTHO05D006643 1.7e-84 317.0 234 71.8
vmacro17444 Vaccinium macrocarpon HOM05D005703 ORTHO05D006643 1.4e-83 313.9 284 59.5
Pp3c22_4620 Physcomitrium patens HOM05D005703 ORTHO05D006643 1.9e-83 313.5 279 55.9
Hund00227 Selenicereus undatus HOM05D005703 ORTHO05D006643 2.4e-83 313.2 305 58.0
Nitab4.5_0002723g0090 Nicotiana tabacum HOM05D005703 ORTHO05D006643 4.2e-83 312.4 314 57.0
Mapoly0084s0041 Marchantia polymorpha HOM05D005703 ORTHO05D006643 7.1e-83 311.6 299 54.5
FAN24G3327 Fragaria x ananassa HOM05D005703 ORTHO05D006643 6.0e-82 308.5 334 55.7
FAN20G2472 Fragaria x ananassa HOM05D005703 ORTHO05D006643 1.3e-81 307.4 334 55.1
FAN27G2042 Fragaria x ananassa HOM05D005703 ORTHO05D006643 2.3e-81 306.6 344 54.1
CANSAT11G2682 Cannabis sativa HOM05D005703 ORTHO05D006643 5.1e-81 305.4 334 56.0
Cfa005074 Carpinus fangiana HOM05D005703 ORTHO05D006643 8.1e-79 298.1 239 68.6
Lj5C191G8 Lonicera japonica HOM05D005703 ORTHO05D006643 1.1e-78 297.7 301 58.5
Cc02_g17090 Coffea canephora HOM05D005703 ORTHO05D006643 8.4e-76 288.1 197 72.6
SMO356G0671 Selaginella moellendorffii HOM05D005703 ORTHO05D006643 9.3e-75 284.6 265 55.8
SMO290G0013 Selaginella moellendorffii HOM05D005703 ORTHO05D006643 3.0e-73 279.6 252 57.5
SMO290G0004 Selaginella moellendorffii HOM05D005703 ORTHO05D006643 3.9e-73 279.3 252 57.5
unitig_0.g54 Utricularia gibba HOM05D005703 ORTHO05D006643 9.6e-72 274.6 198 68.2
BcaB06g27102 Brassica carinata HOM05D005703 ORTHO05D006643 2.6e-69 266.5 260 57.3
SMO356G0278 Selaginella moellendorffii HOM05D005703 ORTHO05D006643 8.5e-68 261.5 252 55.6
Gohir.A12G041600 Gossypium hirsutum HOM05D005703 ORTHO05D006643 1.1e-62 244.6 166 74.1
BraA01t01909Z Brassica rapa HOM05D005703 ORTHO05D006643 1.8e-62 243.8 207 62.8
AagrBONN_evm.TU.Sc2ySwM_228.378 Anthoceros agrestis HOM05D005703 ORTHO05D006643 2.1e-58 230.3 197 61.4
Thhalv10005656m.g Eutrema salsugineum HOM05D005703 ORTHO05D006643 2.8e-55 219.9 181 63.0
Duzib132G0736 Durio zibethinus HOM05D005703 ORTHO05D006643 5.0e-52 209.1 320 41.9
TAR381G0871 Trochodendron aralioides HOM05D005703 ORTHO05D006643 1.0e-44 184.9 117 75.2
BolC1t00937H Brassica oleracea HOM05D005703 ORTHO05D006643 1.2e-42 177.9 144 63.9
MBI01_g29867_MAGBIO Magnolia biondii HOM05D005703 ORTHO05D006643 2.1e-42 177.2 114 78.9
C01p09750 Brassica napus HOM05D005703 ORTHO05D006643 1.4e-41 174.5 186 55.4
BolC2t11489H Brassica oleracea HOM05D005703 ORTHO05D006643 2.2e-36 157.1 186 50.5
BolC4t23697H Brassica oleracea HOM05D005703 ORTHO05D006643 9.4e-35 151.8 188 48.4
BcaC04g19425 Brassica carinata HOM05D005703 ORTHO05D006643 1.8e-33 147.5 225 44.0
CBR_g49480 Chara braunii HOM05D005703 ORTHO05D006643 3.0e-33 146.7 254 36.6
C09p55850 Brassica napus HOM05D005703 ORTHO05D006643 4.0e-33 146.4 214 44.4
C04p21760 Brassica napus HOM05D005703 ORTHO05D006643 2.8e-31 140.2 212 43.4
C02p54250 Brassica napus HOM05D005703 ORTHO05D006643 2.5e-27 127.1 212 42.0
BcaC01g06448 Brassica carinata HOM05D005703 ORTHO05D006643 4.2e-27 126.3 137 56.2
HanXRQChr14g0433731 Helianthus annuus HOM05D005703 ORTHO05D006643 1.6e-26 124.4 79 82.3
QL11p045593 Quercus lobata HOM05D005703 ORTHO05D006643 2.1e-26 124.0 73 74.0
Potri.009G121902 Populus trichocarpa HOM05D005703 ORTHO05D006643 8.0e-26 122.1 104 61.5
PRCOL_00000952 Prasinoderma coloniale HOM05D005703 ORTHO05D006643 1.5e-24 117.9 232 32.3
Cre08.g372000 Chlamydomonas reinhardtii HOM05D005703 ORTHO05D006643 2.6e-24 117.1 273 30.8
Cc02_g17080 Coffea canephora HOM05D005703 ORTHO05D006643 1.1e-22 111.7 74 77.0
unitig_0.g53 Utricularia gibba HOM05D005703 ORTHO05D006643 1.1e-22 111.7 94 60.6
SEGI_33335 Sequoiadendron giganteum HOM05D005703 ORTHO05D006643 4.5e-21 106.3 87 60.9
QL11p045598 Quercus lobata HOM05D005703 ORTHO05D006643 5.0e-20 102.8 75 68.0
MBI01_g29866_MAGBIO Magnolia biondii HOM05D005703 ORTHO05D006643 3.3e-19 100.1 59 79.7
C03p15450 Brassica napus HOM05D005703 ORTHO05D006643 2.3e-17 94.0 151 41.7
BcaC09g52221 Brassica carinata HOM05D005703 ORTHO05D006643 9.8e-16 88.6 61 73.8
C03p56750 Brassica napus HOM05D005703 ORTHO05D006643 3.7e-15 86.7 128 42.2
BolC1t00936H Brassica oleracea HOM05D005703 ORTHO05D006643 4.1e-14 83.2 61 70.5
C03p56740 Brassica napus HOM05D005703 ORTHO05D006643 1.2e-13 81.6 78 57.7
TAR381G1022 Trochodendron aralioides HOM05D005703 ORTHO05D006643 9.5e-11 72.0 85 54.1
Oeu037764.1 Olea europaea HOM05D005703 ORTHO05D006643 6.2e-10 69.3 35 94.3
Lsat_1_v5_gn_1_61800 Lactuca sativa HOM05D005428 ORTHO05D002547 3.4e-08 63.5 57 61.4
AUR62033094 Chenopodium quinoa HOM05D005703 ORTHO05D006643 9.8e-08 62.0 53 62.3
CAN.G878.5 Capsicum annuum HOM05D000269 ORTHO05D000216 1.3e-07 61.6 39 71.8


User provided reference genes

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